Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.344 88.346 114.547 1.00 71.16 O
ATOM 2 P A A 575 -12.996 88.911 113.083 1.00 71.29 P
ATOM 3 OP1 A A 575 -12.283 90.204 113.255 1.00 72.43 O
ATOM 4 OP2 A A 575 -14.258 88.877 112.304 1.00 72.44 O
ATOM 5 O5' A A 575 -11.992 87.837 112.460 1.00 69.56 O
ATOM 6 C5' A A 575 -11.788 87.759 111.027 1.00 69.00 C
ATOM 7 C4' A A 575 -10.336 87.452 110.697 1.00 67.90 C
ATOM 8 O4' A A 575 -9.483 88.524 111.188 1.00 67.23 O
ATOM 9 C3' A A 575 -9.748 86.164 111.262 1.00 67.10 C
ATOM 10 O3' A A 575 -8.777 85.699 110.337 1.00 67.41 O
ATOM 11 C2' A A 575 -9.056 86.652 112.532 1.00 67.39 C
ATOM 12 O2' A A 575 -8.007 85.810 112.968 1.00 68.09 O
ATOM 13 C1' A A 575 -8.504 87.993 112.059 1.00 66.07 C
ATOM 14 N9 A A 575 -8.233 88.981 113.103 1.00 65.34 N
ATOM 15 C8 A A 575 -9.136 89.694 113.849 1.00 65.13 C
ATOM 16 N7 A A 575 -8.583 90.561 114.662 1.00 64.65 N
ATOM 17 C5 A A 575 -7.222 90.399 114.448 1.00 63.91 C
ATOM 18 C6 A A 575 -6.095 91.041 114.997 1.00 63.95 C
ATOM 19 N6 A A 575 -6.167 92.011 115.914 1.00 64.94 N
ATOM 20 N1 A A 575 -4.878 90.650 114.565 1.00 62.69 N
ATOM 21 C2 A A 575 -4.808 89.677 113.645 1.00 65.14 C
ATOM 22 N3 A A 575 -5.793 88.999 113.054 1.00 64.56 N
ATOM 23 C4 A A 575 -6.991 89.416 113.504 1.00 64.96 C
ATOM 24 P G A 576 -8.955 84.271 109.630 1.00 69.62 P
ATOM 25 OP1 G A 576 -10.394 83.923 109.684 1.00 73.87 O
ATOM 26 OP2 G A 576 -7.953 83.339 110.198 1.00 70.20 O
ATOM 27 O5' G A 576 -8.612 84.539 108.093 1.00 70.04 O
TER
ATOM 1 O3' A B 557 -2.440 94.504 117.569 1.00 59.08 O
ATOM 2 P C B 558 -3.351 94.077 118.820 1.00 60.86 P
ATOM 3 OP1 C B 558 -2.439 93.546 119.873 1.00 60.88 O
ATOM 4 OP2 C B 558 -4.466 93.223 118.320 1.00 59.48 O
ATOM 5 O5' C B 558 -3.950 95.466 119.318 1.00 59.55 O
ATOM 6 C5' C B 558 -3.081 96.574 119.604 1.00 60.68 C
ATOM 7 C4' C B 558 -3.881 97.841 119.758 1.00 62.99 C
ATOM 8 O4' C B 558 -4.653 98.050 118.546 1.00 63.17 O
ATOM 9 C3' C B 558 -4.928 97.825 120.859 1.00 64.56 C
ATOM 10 O3' C B 558 -4.381 98.131 122.137 1.00 67.36 O
ATOM 11 C2' C B 558 -5.907 98.884 120.382 1.00 64.14 C
ATOM 12 O2' C B 558 -5.438 100.194 120.623 1.00 65.20 O
ATOM 13 C1' C B 558 -5.913 98.614 118.877 1.00 63.74 C
ATOM 14 N1 C B 558 -6.972 97.670 118.463 1.00 63.40 N
ATOM 15 C2 C B 558 -8.294 98.129 118.373 1.00 63.23 C
ATOM 16 O2 C B 558 -8.545 99.314 118.665 1.00 65.97 O
ATOM 17 N3 C B 558 -9.265 97.275 117.978 1.00 62.00 N
ATOM 18 C4 C B 558 -8.963 96.008 117.687 1.00 62.68 C
ATOM 19 N4 C B 558 -9.955 95.195 117.307 1.00 61.40 N
ATOM 20 C5 C B 558 -7.629 95.512 117.775 1.00 63.49 C
ATOM 21 C6 C B 558 -6.674 96.368 118.164 1.00 63.73 C
ATOM 22 P C B 559 -4.793 97.236 123.408 1.00 69.02 P
ATOM 23 OP1 C B 559 -4.244 97.872 124.632 1.00 68.63 O
ATOM 24 OP2 C B 559 -4.462 95.816 123.104 1.00 67.26 O
ATOM 25 O5' C B 559 -6.379 97.365 123.459 1.00 70.53 O
TER
ATOM 2 P A A 575 -12.996 88.911 113.083 1.00 71.29 P
ATOM 3 OP1 A A 575 -12.283 90.204 113.255 1.00 72.43 O
ATOM 4 OP2 A A 575 -14.258 88.877 112.304 1.00 72.44 O
ATOM 5 O5' A A 575 -11.992 87.837 112.460 1.00 69.56 O
ATOM 6 C5' A A 575 -11.788 87.759 111.027 1.00 69.00 C
ATOM 7 C4' A A 575 -10.336 87.452 110.697 1.00 67.90 C
ATOM 8 O4' A A 575 -9.483 88.524 111.188 1.00 67.23 O
ATOM 9 C3' A A 575 -9.748 86.164 111.262 1.00 67.10 C
ATOM 10 O3' A A 575 -8.777 85.699 110.337 1.00 67.41 O
ATOM 11 C2' A A 575 -9.056 86.652 112.532 1.00 67.39 C
ATOM 12 O2' A A 575 -8.007 85.810 112.968 1.00 68.09 O
ATOM 13 C1' A A 575 -8.504 87.993 112.059 1.00 66.07 C
ATOM 14 N9 A A 575 -8.233 88.981 113.103 1.00 65.34 N
ATOM 15 C8 A A 575 -9.136 89.694 113.849 1.00 65.13 C
ATOM 16 N7 A A 575 -8.583 90.561 114.662 1.00 64.65 N
ATOM 17 C5 A A 575 -7.222 90.399 114.448 1.00 63.91 C
ATOM 18 C6 A A 575 -6.095 91.041 114.997 1.00 63.95 C
ATOM 19 N6 A A 575 -6.167 92.011 115.914 1.00 64.94 N
ATOM 20 N1 A A 575 -4.878 90.650 114.565 1.00 62.69 N
ATOM 21 C2 A A 575 -4.808 89.677 113.645 1.00 65.14 C
ATOM 22 N3 A A 575 -5.793 88.999 113.054 1.00 64.56 N
ATOM 23 C4 A A 575 -6.991 89.416 113.504 1.00 64.96 C
ATOM 24 P G A 576 -8.955 84.271 109.630 1.00 69.62 P
ATOM 25 OP1 G A 576 -10.394 83.923 109.684 1.00 73.87 O
ATOM 26 OP2 G A 576 -7.953 83.339 110.198 1.00 70.20 O
ATOM 27 O5' G A 576 -8.612 84.539 108.093 1.00 70.04 O
TER
ATOM 1 O3' A B 557 -2.440 94.504 117.569 1.00 59.08 O
ATOM 2 P C B 558 -3.351 94.077 118.820 1.00 60.86 P
ATOM 3 OP1 C B 558 -2.439 93.546 119.873 1.00 60.88 O
ATOM 4 OP2 C B 558 -4.466 93.223 118.320 1.00 59.48 O
ATOM 5 O5' C B 558 -3.950 95.466 119.318 1.00 59.55 O
ATOM 6 C5' C B 558 -3.081 96.574 119.604 1.00 60.68 C
ATOM 7 C4' C B 558 -3.881 97.841 119.758 1.00 62.99 C
ATOM 8 O4' C B 558 -4.653 98.050 118.546 1.00 63.17 O
ATOM 9 C3' C B 558 -4.928 97.825 120.859 1.00 64.56 C
ATOM 10 O3' C B 558 -4.381 98.131 122.137 1.00 67.36 O
ATOM 11 C2' C B 558 -5.907 98.884 120.382 1.00 64.14 C
ATOM 12 O2' C B 558 -5.438 100.194 120.623 1.00 65.20 O
ATOM 13 C1' C B 558 -5.913 98.614 118.877 1.00 63.74 C
ATOM 14 N1 C B 558 -6.972 97.670 118.463 1.00 63.40 N
ATOM 15 C2 C B 558 -8.294 98.129 118.373 1.00 63.23 C
ATOM 16 O2 C B 558 -8.545 99.314 118.665 1.00 65.97 O
ATOM 17 N3 C B 558 -9.265 97.275 117.978 1.00 62.00 N
ATOM 18 C4 C B 558 -8.963 96.008 117.687 1.00 62.68 C
ATOM 19 N4 C B 558 -9.955 95.195 117.307 1.00 61.40 N
ATOM 20 C5 C B 558 -7.629 95.512 117.775 1.00 63.49 C
ATOM 21 C6 C B 558 -6.674 96.368 118.164 1.00 63.73 C
ATOM 22 P C B 559 -4.793 97.236 123.408 1.00 69.02 P
ATOM 23 OP1 C B 559 -4.244 97.872 124.632 1.00 68.63 O
ATOM 24 OP2 C B 559 -4.462 95.816 123.104 1.00 67.26 O
ATOM 25 O5' C B 559 -6.379 97.365 123.459 1.00 70.53 O
TER
Atoms:
OP1: (-12.283,90.204,113.255)
OP2: (-14.258,88.877,112.304)
C3': (-9.748,86.164,111.262)
C1': (-8.504,87.993,112.059)
C5': (-11.788,87.759,111.027)
O4': (-9.483,88.524,111.188)
C8: (-9.136,89.694,113.849)
O2': (-8.007,85.810,112.968)
C6: (-6.095,91.041,114.997)
C5: (-7.222,90.399,114.448)
C4: (-6.991,89.416,113.504)
P: (-12.996,88.911,113.083)
C4': (-10.336,87.452,110.697)
C2': (-9.056,86.652,112.532)
C2: (-4.808,89.677,113.645)
N1: (-4.878,90.650,114.565)
N3: (-5.793,88.999,113.054)
N6: (-6.167,92.011,115.914)
N7: (-8.583,90.561,114.662)
N9: (-8.233,88.981,113.103)
O5': (-11.992,87.837,112.460)
O3': (-8.777,85.699,110.337)
OP2: (-14.258,88.877,112.304)
C3': (-9.748,86.164,111.262)
C1': (-8.504,87.993,112.059)
C5': (-11.788,87.759,111.027)
O4': (-9.483,88.524,111.188)
C8: (-9.136,89.694,113.849)
O2': (-8.007,85.810,112.968)
C6: (-6.095,91.041,114.997)
C5: (-7.222,90.399,114.448)
C4: (-6.991,89.416,113.504)
P: (-12.996,88.911,113.083)
C4': (-10.336,87.452,110.697)
C2': (-9.056,86.652,112.532)
C2: (-4.808,89.677,113.645)
N1: (-4.878,90.650,114.565)
N3: (-5.793,88.999,113.054)
N6: (-6.167,92.011,115.914)
N7: (-8.583,90.561,114.662)
N9: (-8.233,88.981,113.103)
O5': (-11.992,87.837,112.460)
O3': (-8.777,85.699,110.337)
C2: (-8.294,98.129,118.373)
OP1: (-2.439,93.546,119.873)
OP2: (-4.466,93.223,118.320)
C4: (-8.963,96.008,117.687)
O5': (-3.950,95.466,119.318)
C3': (-4.928,97.825,120.859)
C1': (-5.913,98.614,118.877)
O4': (-4.653,98.050,118.546)
C5': (-3.081,96.574,119.604)
P: (-3.351,94.077,118.820)
O2: (-8.545,99.314,118.665)
C4': (-3.881,97.841,119.758)
C2': (-5.907,98.884,120.382)
O2': (-5.438,100.194,120.623)
N1: (-6.972,97.670,118.463)
N3: (-9.265,97.275,117.978)
N4: (-9.955,95.195,117.307)
C6: (-6.674,96.368,118.164)
C5: (-7.629,95.512,117.775)
O3': (-4.381,98.131,122.137)
OP1: (-2.439,93.546,119.873)
OP2: (-4.466,93.223,118.320)
C4: (-8.963,96.008,117.687)
O5': (-3.950,95.466,119.318)
C3': (-4.928,97.825,120.859)
C1': (-5.913,98.614,118.877)
O4': (-4.653,98.050,118.546)
C5': (-3.081,96.574,119.604)
P: (-3.351,94.077,118.820)
O2: (-8.545,99.314,118.665)
C4': (-3.881,97.841,119.758)
C2': (-5.907,98.884,120.382)
O2': (-5.438,100.194,120.623)
N1: (-6.972,97.670,118.463)
N3: (-9.265,97.275,117.978)
N4: (-9.955,95.195,117.307)
C6: (-6.674,96.368,118.164)
C5: (-7.629,95.512,117.775)
O3': (-4.381,98.131,122.137)
Image (generated by PyMOL):