Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K1V:A2:A21
Extra
PDB:
ATOM 1 O3' G A 1 -9.625 7.442 13.981 1.00 22.53 O
ATOM 2 P A A 2 -8.997 5.963 14.031 1.00 23.59 P
ATOM 3 OP1 A A 2 -7.521 6.100 14.051 1.00 23.64 O
ATOM 4 OP2 A A 2 -9.641 5.149 12.975 1.00 30.45 O
ATOM 5 O5' A A 2 -9.488 5.393 15.433 1.00 24.97 O
ATOM 6 C5' A A 2 -9.139 6.046 16.648 1.00 32.12 C
ATOM 7 C4' A A 2 -9.916 5.453 17.798 1.00 29.47 C
ATOM 8 O4' A A 2 -11.329 5.761 17.638 1.00 31.10 O
ATOM 9 C3' A A 2 -9.892 3.936 17.890 1.00 26.35 C
ATOM 10 O3' A A 2 -8.705 3.446 18.505 1.00 29.55 O
ATOM 11 C2' A A 2 -11.132 3.668 18.724 1.00 21.90 C
ATOM 12 O2' A A 2 -10.935 3.988 20.084 1.00 32.68 O
ATOM 13 C1' A A 2 -12.108 4.670 18.110 1.00 28.34 C
ATOM 14 N9 A A 2 -12.827 4.087 16.978 1.00 20.96 N
ATOM 15 C8 A A 2 -12.516 4.154 15.643 1.00 23.99 C
ATOM 16 N7 A A 2 -13.352 3.499 14.872 1.00 25.59 N
ATOM 17 C5 A A 2 -14.279 2.969 15.760 1.00 23.98 C
ATOM 18 C6 A A 2 -15.426 2.170 15.574 1.00 28.26 C
ATOM 19 N6 A A 2 -15.853 1.746 14.383 1.00 21.25 N
ATOM 20 N1 A A 2 -16.128 1.815 16.673 1.00 33.83 N
ATOM 21 C2 A A 2 -15.702 2.240 17.870 1.00 27.68 C
ATOM 22 N3 A A 2 -14.647 2.992 18.170 1.00 24.00 N
ATOM 23 C4 A A 2 -13.969 3.326 17.059 1.00 23.08 C
ATOM 24 P G A 3 -8.048 2.082 17.968 1.00 32.43 P
ATOM 25 OP1 G A 3 -6.619 2.064 18.362 1.00 38.73 O
ATOM 26 OP2 G A 3 -8.422 1.945 16.535 1.00 23.39 O
ATOM 27 O5' G A 3 -8.827 0.932 18.754 1.00 32.81 O
TER
ATOM 1 O3' A B 20 -10.691 -1.043 27.789 1.00 61.96 O
ATOM 2 P A B 21 -10.851 -2.626 27.538 1.00 62.77 P
ATOM 3 OP1 A B 21 -10.222 -3.327 28.684 1.00 71.50 O
ATOM 4 OP2 A B 21 -10.395 -2.926 26.157 1.00 66.77 O
ATOM 5 O5' A B 21 -12.428 -2.866 27.603 1.00 61.20 O
ATOM 6 C5' A B 21 -13.196 -2.270 28.637 1.00 53.86 C
ATOM 7 C4' A B 21 -14.683 -2.444 28.400 1.00 50.96 C
ATOM 8 O4' A B 21 -15.096 -1.688 27.224 1.00 48.13 O
ATOM 9 C3' A B 21 -15.029 -3.905 28.095 1.00 49.34 C
ATOM 10 O3' A B 21 -16.058 -4.456 28.914 1.00 51.04 O
ATOM 11 C2' A B 21 -15.187 -4.011 26.581 1.00 49.10 C
ATOM 12 O2' A B 21 -16.285 -4.816 26.206 1.00 47.78 O
ATOM 13 C1' A B 21 -15.560 -2.576 26.231 1.00 47.36 C
ATOM 14 N9 A B 21 -15.360 -2.052 24.879 1.00 41.95 N
ATOM 15 C8 A B 21 -14.269 -2.084 24.046 1.00 39.04 C
ATOM 16 N7 A B 21 -14.494 -1.564 22.863 1.00 41.61 N
ATOM 17 C5 A B 21 -15.819 -1.153 22.925 1.00 39.46 C
ATOM 18 C6 A B 21 -16.669 -0.531 21.986 1.00 38.54 C
ATOM 19 N6 A B 21 -16.295 -0.204 20.748 1.00 38.98 N
ATOM 20 N1 A B 21 -17.936 -0.256 22.371 1.00 43.49 N
ATOM 21 C2 A B 21 -18.316 -0.589 23.613 1.00 37.07 C
ATOM 22 N3 A B 21 -17.612 -1.177 24.579 1.00 40.91 N
ATOM 23 C4 A B 21 -16.359 -1.435 24.165 1.00 38.89 C
ATOM 24 P A B 22 -16.250 -6.046 29.005 1.00 47.56 P
ATOM 25 OP1 A B 22 -16.567 -6.328 30.417 1.00 43.77 O
ATOM 26 OP2 A B 22 -15.064 -6.685 28.381 1.00 56.43 O
ATOM 27 O5' A B 22 -17.540 -6.352 28.108 1.00 46.74 O
TER
ATOM 2 P A A 2 -8.997 5.963 14.031 1.00 23.59 P
ATOM 3 OP1 A A 2 -7.521 6.100 14.051 1.00 23.64 O
ATOM 4 OP2 A A 2 -9.641 5.149 12.975 1.00 30.45 O
ATOM 5 O5' A A 2 -9.488 5.393 15.433 1.00 24.97 O
ATOM 6 C5' A A 2 -9.139 6.046 16.648 1.00 32.12 C
ATOM 7 C4' A A 2 -9.916 5.453 17.798 1.00 29.47 C
ATOM 8 O4' A A 2 -11.329 5.761 17.638 1.00 31.10 O
ATOM 9 C3' A A 2 -9.892 3.936 17.890 1.00 26.35 C
ATOM 10 O3' A A 2 -8.705 3.446 18.505 1.00 29.55 O
ATOM 11 C2' A A 2 -11.132 3.668 18.724 1.00 21.90 C
ATOM 12 O2' A A 2 -10.935 3.988 20.084 1.00 32.68 O
ATOM 13 C1' A A 2 -12.108 4.670 18.110 1.00 28.34 C
ATOM 14 N9 A A 2 -12.827 4.087 16.978 1.00 20.96 N
ATOM 15 C8 A A 2 -12.516 4.154 15.643 1.00 23.99 C
ATOM 16 N7 A A 2 -13.352 3.499 14.872 1.00 25.59 N
ATOM 17 C5 A A 2 -14.279 2.969 15.760 1.00 23.98 C
ATOM 18 C6 A A 2 -15.426 2.170 15.574 1.00 28.26 C
ATOM 19 N6 A A 2 -15.853 1.746 14.383 1.00 21.25 N
ATOM 20 N1 A A 2 -16.128 1.815 16.673 1.00 33.83 N
ATOM 21 C2 A A 2 -15.702 2.240 17.870 1.00 27.68 C
ATOM 22 N3 A A 2 -14.647 2.992 18.170 1.00 24.00 N
ATOM 23 C4 A A 2 -13.969 3.326 17.059 1.00 23.08 C
ATOM 24 P G A 3 -8.048 2.082 17.968 1.00 32.43 P
ATOM 25 OP1 G A 3 -6.619 2.064 18.362 1.00 38.73 O
ATOM 26 OP2 G A 3 -8.422 1.945 16.535 1.00 23.39 O
ATOM 27 O5' G A 3 -8.827 0.932 18.754 1.00 32.81 O
TER
ATOM 1 O3' A B 20 -10.691 -1.043 27.789 1.00 61.96 O
ATOM 2 P A B 21 -10.851 -2.626 27.538 1.00 62.77 P
ATOM 3 OP1 A B 21 -10.222 -3.327 28.684 1.00 71.50 O
ATOM 4 OP2 A B 21 -10.395 -2.926 26.157 1.00 66.77 O
ATOM 5 O5' A B 21 -12.428 -2.866 27.603 1.00 61.20 O
ATOM 6 C5' A B 21 -13.196 -2.270 28.637 1.00 53.86 C
ATOM 7 C4' A B 21 -14.683 -2.444 28.400 1.00 50.96 C
ATOM 8 O4' A B 21 -15.096 -1.688 27.224 1.00 48.13 O
ATOM 9 C3' A B 21 -15.029 -3.905 28.095 1.00 49.34 C
ATOM 10 O3' A B 21 -16.058 -4.456 28.914 1.00 51.04 O
ATOM 11 C2' A B 21 -15.187 -4.011 26.581 1.00 49.10 C
ATOM 12 O2' A B 21 -16.285 -4.816 26.206 1.00 47.78 O
ATOM 13 C1' A B 21 -15.560 -2.576 26.231 1.00 47.36 C
ATOM 14 N9 A B 21 -15.360 -2.052 24.879 1.00 41.95 N
ATOM 15 C8 A B 21 -14.269 -2.084 24.046 1.00 39.04 C
ATOM 16 N7 A B 21 -14.494 -1.564 22.863 1.00 41.61 N
ATOM 17 C5 A B 21 -15.819 -1.153 22.925 1.00 39.46 C
ATOM 18 C6 A B 21 -16.669 -0.531 21.986 1.00 38.54 C
ATOM 19 N6 A B 21 -16.295 -0.204 20.748 1.00 38.98 N
ATOM 20 N1 A B 21 -17.936 -0.256 22.371 1.00 43.49 N
ATOM 21 C2 A B 21 -18.316 -0.589 23.613 1.00 37.07 C
ATOM 22 N3 A B 21 -17.612 -1.177 24.579 1.00 40.91 N
ATOM 23 C4 A B 21 -16.359 -1.435 24.165 1.00 38.89 C
ATOM 24 P A B 22 -16.250 -6.046 29.005 1.00 47.56 P
ATOM 25 OP1 A B 22 -16.567 -6.328 30.417 1.00 43.77 O
ATOM 26 OP2 A B 22 -15.064 -6.685 28.381 1.00 56.43 O
ATOM 27 O5' A B 22 -17.540 -6.352 28.108 1.00 46.74 O
TER
Atoms:
OP1: (-7.521,6.100,14.051)
OP2: (-9.641,5.149,12.975)
C3': (-9.892,3.936,17.890)
C1': (-12.108,4.670,18.110)
C5': (-9.139,6.046,16.648)
O4': (-11.329,5.761,17.638)
C8: (-12.516,4.154,15.643)
O2': (-10.935,3.988,20.084)
C6: (-15.426,2.170,15.574)
C5: (-14.279,2.969,15.760)
C4: (-13.969,3.326,17.059)
P: (-8.997,5.963,14.031)
C4': (-9.916,5.453,17.798)
C2': (-11.132,3.668,18.724)
C2: (-15.702,2.240,17.870)
N1: (-16.128,1.815,16.673)
N3: (-14.647,2.992,18.170)
N6: (-15.853,1.746,14.383)
N7: (-13.352,3.499,14.872)
N9: (-12.827,4.087,16.978)
O5': (-9.488,5.393,15.433)
O3': (-8.705,3.446,18.505)
OP2: (-9.641,5.149,12.975)
C3': (-9.892,3.936,17.890)
C1': (-12.108,4.670,18.110)
C5': (-9.139,6.046,16.648)
O4': (-11.329,5.761,17.638)
C8: (-12.516,4.154,15.643)
O2': (-10.935,3.988,20.084)
C6: (-15.426,2.170,15.574)
C5: (-14.279,2.969,15.760)
C4: (-13.969,3.326,17.059)
P: (-8.997,5.963,14.031)
C4': (-9.916,5.453,17.798)
C2': (-11.132,3.668,18.724)
C2: (-15.702,2.240,17.870)
N1: (-16.128,1.815,16.673)
N3: (-14.647,2.992,18.170)
N6: (-15.853,1.746,14.383)
N7: (-13.352,3.499,14.872)
N9: (-12.827,4.087,16.978)
O5': (-9.488,5.393,15.433)
O3': (-8.705,3.446,18.505)
OP1: (-10.222,-3.327,28.684)
OP2: (-10.395,-2.926,26.157)
C3': (-15.029,-3.905,28.095)
C1': (-15.560,-2.576,26.231)
C5': (-13.196,-2.270,28.637)
O4': (-15.096,-1.688,27.224)
C8: (-14.269,-2.084,24.046)
O2': (-16.285,-4.816,26.206)
C6: (-16.669,-0.531,21.986)
C5: (-15.819,-1.153,22.925)
C4: (-16.359,-1.435,24.165)
P: (-10.851,-2.626,27.538)
C4': (-14.683,-2.444,28.400)
C2': (-15.187,-4.011,26.581)
C2: (-18.316,-0.589,23.613)
N1: (-17.936,-0.256,22.371)
N3: (-17.612,-1.177,24.579)
N6: (-16.295,-0.204,20.748)
N7: (-14.494,-1.564,22.863)
N9: (-15.360,-2.052,24.879)
O5': (-12.428,-2.866,27.603)
O3': (-16.058,-4.456,28.914)
OP2: (-10.395,-2.926,26.157)
C3': (-15.029,-3.905,28.095)
C1': (-15.560,-2.576,26.231)
C5': (-13.196,-2.270,28.637)
O4': (-15.096,-1.688,27.224)
C8: (-14.269,-2.084,24.046)
O2': (-16.285,-4.816,26.206)
C6: (-16.669,-0.531,21.986)
C5: (-15.819,-1.153,22.925)
C4: (-16.359,-1.435,24.165)
P: (-10.851,-2.626,27.538)
C4': (-14.683,-2.444,28.400)
C2': (-15.187,-4.011,26.581)
C2: (-18.316,-0.589,23.613)
N1: (-17.936,-0.256,22.371)
N3: (-17.612,-1.177,24.579)
N6: (-16.295,-0.204,20.748)
N7: (-14.494,-1.564,22.863)
N9: (-15.360,-2.052,24.879)
O5': (-12.428,-2.866,27.603)
O3': (-16.058,-4.456,28.914)
Image (generated by PyMOL):