Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.938 90.250 115.067 1.00 78.34 O
ATOM 2 P A A 575 -13.663 90.797 113.583 1.00 78.49 P
ATOM 3 OP1 A A 575 -12.966 92.104 113.707 1.00 77.20 O
ATOM 4 OP2 A A 575 -14.947 90.724 112.839 1.00 78.76 O
ATOM 5 O5' A A 575 -12.667 89.722 112.955 1.00 76.18 O
ATOM 6 C5' A A 575 -12.530 89.611 111.532 1.00 75.83 C
ATOM 7 C4' A A 575 -11.098 89.305 111.144 1.00 75.00 C
ATOM 8 O4' A A 575 -10.221 90.375 111.592 1.00 73.93 O
ATOM 9 C3' A A 575 -10.482 88.011 111.656 1.00 74.25 C
ATOM 10 O3' A A 575 -9.651 87.499 110.632 1.00 74.31 O
ATOM 11 C2' A A 575 -9.626 88.475 112.831 1.00 73.64 C
ATOM 12 O2' A A 575 -8.505 87.642 113.056 1.00 73.43 O
ATOM 13 C1' A A 575 -9.149 89.831 112.333 1.00 72.56 C
ATOM 14 N9 A A 575 -8.790 90.773 113.394 1.00 71.84 N
ATOM 15 C8 A A 575 -9.615 91.597 114.127 1.00 70.74 C
ATOM 16 N7 A A 575 -8.975 92.374 114.965 1.00 70.40 N
ATOM 17 C5 A A 575 -7.639 92.030 114.784 1.00 71.33 C
ATOM 18 C6 A A 575 -6.449 92.505 115.369 1.00 70.63 C
ATOM 19 N6 A A 575 -6.409 93.478 116.287 1.00 70.34 N
ATOM 20 N1 A A 575 -5.287 91.944 114.970 1.00 69.64 N
ATOM 21 C2 A A 575 -5.325 90.977 114.045 1.00 69.54 C
ATOM 22 N3 A A 575 -6.373 90.452 113.419 1.00 70.44 N
ATOM 23 C4 A A 575 -7.514 91.031 113.835 1.00 71.04 C
ATOM 24 P G A 576 -9.974 86.063 110.002 1.00 76.12 P
ATOM 25 OP1 G A 576 -11.455 85.956 109.940 1.00 76.75 O
ATOM 26 OP2 G A 576 -9.188 85.048 110.755 1.00 74.42 O
ATOM 27 O5' G A 576 -9.428 86.165 108.507 1.00 76.37 O
TER
ATOM 1 O3' A B 557 -2.613 95.486 117.594 1.00 65.94 O
ATOM 2 P C B 558 -3.532 95.204 118.882 1.00 66.99 P
ATOM 3 OP1 C B 558 -2.643 94.812 120.004 1.00 68.72 O
ATOM 4 OP2 C B 558 -4.629 94.294 118.469 1.00 67.10 O
ATOM 5 O5' C B 558 -4.121 96.640 119.233 1.00 66.58 O
ATOM 6 C5' C B 558 -3.240 97.718 119.587 1.00 67.01 C
ATOM 7 C4' C B 558 -4.021 98.989 119.797 1.00 68.21 C
ATOM 8 O4' C B 558 -4.795 99.266 118.601 1.00 68.87 O
ATOM 9 C3' C B 558 -5.058 98.959 120.902 1.00 69.15 C
ATOM 10 O3' C B 558 -4.473 99.209 122.171 1.00 72.03 O
ATOM 11 C2' C B 558 -6.002 100.068 120.470 1.00 69.17 C
ATOM 12 O2' C B 558 -5.469 101.355 120.716 1.00 69.38 O
ATOM 13 C1' C B 558 -6.040 99.841 118.960 1.00 67.94 C
ATOM 14 N1 C B 558 -7.110 98.918 118.535 1.00 67.92 N
ATOM 15 C2 C B 558 -8.426 99.393 118.452 1.00 67.91 C
ATOM 16 O2 C B 558 -8.666 100.577 118.765 1.00 68.89 O
ATOM 17 N3 C B 558 -9.403 98.551 118.036 1.00 66.59 N
ATOM 18 C4 C B 558 -9.108 97.290 117.716 1.00 65.56 C
ATOM 19 N4 C B 558 -10.098 96.502 117.298 1.00 66.06 N
ATOM 20 C5 C B 558 -7.784 96.779 117.807 1.00 66.17 C
ATOM 21 C6 C B 558 -6.827 97.616 118.217 1.00 67.27 C
ATOM 22 P C B 559 -4.818 98.243 123.409 1.00 74.83 P
ATOM 23 OP1 C B 559 -4.041 98.732 124.576 1.00 74.83 O
ATOM 24 OP2 C B 559 -4.661 96.827 122.960 1.00 73.08 O
ATOM 25 O5' C B 559 -6.360 98.521 123.699 1.00 74.76 O
TER
ATOM 2 P A A 575 -13.663 90.797 113.583 1.00 78.49 P
ATOM 3 OP1 A A 575 -12.966 92.104 113.707 1.00 77.20 O
ATOM 4 OP2 A A 575 -14.947 90.724 112.839 1.00 78.76 O
ATOM 5 O5' A A 575 -12.667 89.722 112.955 1.00 76.18 O
ATOM 6 C5' A A 575 -12.530 89.611 111.532 1.00 75.83 C
ATOM 7 C4' A A 575 -11.098 89.305 111.144 1.00 75.00 C
ATOM 8 O4' A A 575 -10.221 90.375 111.592 1.00 73.93 O
ATOM 9 C3' A A 575 -10.482 88.011 111.656 1.00 74.25 C
ATOM 10 O3' A A 575 -9.651 87.499 110.632 1.00 74.31 O
ATOM 11 C2' A A 575 -9.626 88.475 112.831 1.00 73.64 C
ATOM 12 O2' A A 575 -8.505 87.642 113.056 1.00 73.43 O
ATOM 13 C1' A A 575 -9.149 89.831 112.333 1.00 72.56 C
ATOM 14 N9 A A 575 -8.790 90.773 113.394 1.00 71.84 N
ATOM 15 C8 A A 575 -9.615 91.597 114.127 1.00 70.74 C
ATOM 16 N7 A A 575 -8.975 92.374 114.965 1.00 70.40 N
ATOM 17 C5 A A 575 -7.639 92.030 114.784 1.00 71.33 C
ATOM 18 C6 A A 575 -6.449 92.505 115.369 1.00 70.63 C
ATOM 19 N6 A A 575 -6.409 93.478 116.287 1.00 70.34 N
ATOM 20 N1 A A 575 -5.287 91.944 114.970 1.00 69.64 N
ATOM 21 C2 A A 575 -5.325 90.977 114.045 1.00 69.54 C
ATOM 22 N3 A A 575 -6.373 90.452 113.419 1.00 70.44 N
ATOM 23 C4 A A 575 -7.514 91.031 113.835 1.00 71.04 C
ATOM 24 P G A 576 -9.974 86.063 110.002 1.00 76.12 P
ATOM 25 OP1 G A 576 -11.455 85.956 109.940 1.00 76.75 O
ATOM 26 OP2 G A 576 -9.188 85.048 110.755 1.00 74.42 O
ATOM 27 O5' G A 576 -9.428 86.165 108.507 1.00 76.37 O
TER
ATOM 1 O3' A B 557 -2.613 95.486 117.594 1.00 65.94 O
ATOM 2 P C B 558 -3.532 95.204 118.882 1.00 66.99 P
ATOM 3 OP1 C B 558 -2.643 94.812 120.004 1.00 68.72 O
ATOM 4 OP2 C B 558 -4.629 94.294 118.469 1.00 67.10 O
ATOM 5 O5' C B 558 -4.121 96.640 119.233 1.00 66.58 O
ATOM 6 C5' C B 558 -3.240 97.718 119.587 1.00 67.01 C
ATOM 7 C4' C B 558 -4.021 98.989 119.797 1.00 68.21 C
ATOM 8 O4' C B 558 -4.795 99.266 118.601 1.00 68.87 O
ATOM 9 C3' C B 558 -5.058 98.959 120.902 1.00 69.15 C
ATOM 10 O3' C B 558 -4.473 99.209 122.171 1.00 72.03 O
ATOM 11 C2' C B 558 -6.002 100.068 120.470 1.00 69.17 C
ATOM 12 O2' C B 558 -5.469 101.355 120.716 1.00 69.38 O
ATOM 13 C1' C B 558 -6.040 99.841 118.960 1.00 67.94 C
ATOM 14 N1 C B 558 -7.110 98.918 118.535 1.00 67.92 N
ATOM 15 C2 C B 558 -8.426 99.393 118.452 1.00 67.91 C
ATOM 16 O2 C B 558 -8.666 100.577 118.765 1.00 68.89 O
ATOM 17 N3 C B 558 -9.403 98.551 118.036 1.00 66.59 N
ATOM 18 C4 C B 558 -9.108 97.290 117.716 1.00 65.56 C
ATOM 19 N4 C B 558 -10.098 96.502 117.298 1.00 66.06 N
ATOM 20 C5 C B 558 -7.784 96.779 117.807 1.00 66.17 C
ATOM 21 C6 C B 558 -6.827 97.616 118.217 1.00 67.27 C
ATOM 22 P C B 559 -4.818 98.243 123.409 1.00 74.83 P
ATOM 23 OP1 C B 559 -4.041 98.732 124.576 1.00 74.83 O
ATOM 24 OP2 C B 559 -4.661 96.827 122.960 1.00 73.08 O
ATOM 25 O5' C B 559 -6.360 98.521 123.699 1.00 74.76 O
TER
Atoms:
OP1: (-12.966,92.104,113.707)
OP2: (-14.947,90.724,112.839)
C3': (-10.482,88.011,111.656)
C1': (-9.149,89.831,112.333)
C5': (-12.530,89.611,111.532)
O4': (-10.221,90.375,111.592)
C8: (-9.615,91.597,114.127)
O2': (-8.505,87.642,113.056)
C6: (-6.449,92.505,115.369)
C5: (-7.639,92.030,114.784)
C4: (-7.514,91.031,113.835)
P: (-13.663,90.797,113.583)
C4': (-11.098,89.305,111.144)
C2': (-9.626,88.475,112.831)
C2: (-5.325,90.977,114.045)
N1: (-5.287,91.944,114.970)
N3: (-6.373,90.452,113.419)
N6: (-6.409,93.478,116.287)
N7: (-8.975,92.374,114.965)
N9: (-8.790,90.773,113.394)
O5': (-12.667,89.722,112.955)
O3': (-9.651,87.499,110.632)
OP2: (-14.947,90.724,112.839)
C3': (-10.482,88.011,111.656)
C1': (-9.149,89.831,112.333)
C5': (-12.530,89.611,111.532)
O4': (-10.221,90.375,111.592)
C8: (-9.615,91.597,114.127)
O2': (-8.505,87.642,113.056)
C6: (-6.449,92.505,115.369)
C5: (-7.639,92.030,114.784)
C4: (-7.514,91.031,113.835)
P: (-13.663,90.797,113.583)
C4': (-11.098,89.305,111.144)
C2': (-9.626,88.475,112.831)
C2: (-5.325,90.977,114.045)
N1: (-5.287,91.944,114.970)
N3: (-6.373,90.452,113.419)
N6: (-6.409,93.478,116.287)
N7: (-8.975,92.374,114.965)
N9: (-8.790,90.773,113.394)
O5': (-12.667,89.722,112.955)
O3': (-9.651,87.499,110.632)
C2: (-8.426,99.393,118.452)
OP1: (-2.643,94.812,120.004)
OP2: (-4.629,94.294,118.469)
C4: (-9.108,97.290,117.716)
O5': (-4.121,96.640,119.233)
C3': (-5.058,98.959,120.902)
C1': (-6.040,99.841,118.960)
O4': (-4.795,99.266,118.601)
C5': (-3.240,97.718,119.587)
P: (-3.532,95.204,118.882)
O2: (-8.666,100.577,118.765)
C4': (-4.021,98.989,119.797)
C2': (-6.002,100.068,120.470)
O2': (-5.469,101.355,120.716)
N1: (-7.110,98.918,118.535)
N3: (-9.403,98.551,118.036)
N4: (-10.098,96.502,117.298)
C6: (-6.827,97.616,118.217)
C5: (-7.784,96.779,117.807)
O3': (-4.473,99.209,122.171)
OP1: (-2.643,94.812,120.004)
OP2: (-4.629,94.294,118.469)
C4: (-9.108,97.290,117.716)
O5': (-4.121,96.640,119.233)
C3': (-5.058,98.959,120.902)
C1': (-6.040,99.841,118.960)
O4': (-4.795,99.266,118.601)
C5': (-3.240,97.718,119.587)
P: (-3.532,95.204,118.882)
O2: (-8.666,100.577,118.765)
C4': (-4.021,98.989,119.797)
C2': (-6.002,100.068,120.470)
O2': (-5.469,101.355,120.716)
N1: (-7.110,98.918,118.535)
N3: (-9.403,98.551,118.036)
N4: (-10.098,96.502,117.298)
C6: (-6.827,97.616,118.217)
C5: (-7.784,96.779,117.807)
O3': (-4.473,99.209,122.171)
Image (generated by PyMOL):