Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2TRA:A9:A44
Extra
PDB:
ATOM 1 O3' A A 8 6.353 4.070 -2.272 1.00 1.00 O
ATOM 2 P G A 9 6.488 2.538 -1.824 1.00 1.00 P
ATOM 3 OP1 G A 9 5.178 1.890 -1.510 1.00 1.00 O
ATOM 4 OP2 G A 9 7.466 2.632 -0.703 1.00 1.00 O
ATOM 5 O5' G A 9 7.122 1.849 -3.095 1.00 1.00 O
ATOM 6 C5' G A 9 7.638 0.493 -2.900 1.00 1.00 C
ATOM 7 C4' G A 9 8.370 0.351 -4.246 1.00 1.00 C
ATOM 8 O4' G A 9 7.491 0.715 -5.247 1.00 1.00 O
ATOM 9 C3' G A 9 9.569 1.269 -4.320 1.00 1.00 C
ATOM 10 O3' G A 9 10.676 0.655 -3.693 1.00 1.00 O
ATOM 11 C2' G A 9 9.686 1.424 -5.815 1.00 1.00 C
ATOM 12 O2' G A 9 10.400 0.250 -6.189 1.00 5.96 O
ATOM 13 C1' G A 9 8.241 1.384 -6.279 1.00 1.00 C
ATOM 14 N9 G A 9 7.786 2.740 -6.578 1.00 1.00 N
ATOM 15 C8 G A 9 6.740 3.449 -6.055 1.00 2.49 C
ATOM 16 N7 G A 9 6.599 4.664 -6.548 1.00 3.53 N
ATOM 17 C5 G A 9 7.638 4.745 -7.475 1.00 1.00 C
ATOM 18 C6 G A 9 8.032 5.805 -8.327 1.00 1.00 C
ATOM 19 O6 G A 9 7.509 6.905 -8.447 1.00 6.24 O
ATOM 20 N1 G A 9 9.108 5.515 -9.104 1.00 1.00 N
ATOM 21 C2 G A 9 9.754 4.327 -9.075 1.00 1.00 C
ATOM 22 N2 G A 9 10.787 4.232 -9.912 1.00 1.00 N
ATOM 23 N3 G A 9 9.428 3.307 -8.282 1.00 2.34 N
ATOM 24 C4 G A 9 8.364 3.578 -7.505 1.00 1.00 C
ATOM 25 P U A 10 12.054 1.384 -3.438 1.00 1.00 P
ATOM 26 OP1 U A 10 13.075 0.412 -2.960 1.00 1.00 O
ATOM 27 OP2 U A 10 11.802 2.477 -2.482 1.00 1.00 O
ATOM 28 O5' U A 10 12.460 1.924 -4.874 1.00 1.00 O
TER
ATOM 1 O3' A B 43 -3.567 8.539 -2.332 1.00 3.38 O
ATOM 2 P G B 44 -2.589 8.336 -1.091 1.00 5.02 P
ATOM 3 OP1 G B 44 -3.124 7.317 -0.134 1.00 10.17 O
ATOM 4 OP2 G B 44 -2.417 9.686 -0.523 1.00 5.22 O
ATOM 5 O5' G B 44 -1.316 7.749 -1.824 1.00 1.00 O
ATOM 6 C5' G B 44 -0.744 6.581 -1.181 1.00 1.00 C
ATOM 7 C4' G B 44 0.523 6.284 -1.958 1.00 3.05 C
ATOM 8 O4' G B 44 0.474 6.851 -3.259 1.00 7.36 O
ATOM 9 C3' G B 44 1.820 6.804 -1.345 1.00 3.39 C
ATOM 10 O3' G B 44 2.282 6.008 -0.239 1.00 4.71 O
ATOM 11 C2' G B 44 2.743 6.804 -2.542 1.00 1.00 C
ATOM 12 O2' G B 44 3.253 5.501 -2.706 1.00 1.16 O
ATOM 13 C1' G B 44 1.771 7.168 -3.693 1.00 1.01 C
ATOM 14 N9 G B 44 2.097 8.566 -3.977 1.00 1.00 N
ATOM 15 C8 G B 44 1.605 9.733 -3.513 1.00 2.95 C
ATOM 16 N7 G B 44 2.226 10.786 -4.007 1.00 7.11 N
ATOM 17 C5 G B 44 3.210 10.253 -4.814 1.00 1.00 C
ATOM 18 C6 G B 44 4.207 10.861 -5.621 1.00 1.00 C
ATOM 19 O6 G B 44 4.403 12.076 -5.756 1.00 1.00 O
ATOM 20 N1 G B 44 5.006 9.976 -6.294 1.00 1.00 N
ATOM 21 C2 G B 44 4.846 8.633 -6.204 1.00 1.93 C
ATOM 22 N2 G B 44 5.695 7.844 -6.892 1.00 12.68 N
ATOM 23 N3 G B 44 3.924 8.019 -5.472 1.00 1.00 N
ATOM 24 C4 G B 44 3.155 8.890 -4.799 1.00 1.00 C
ATOM 25 P A B 45 1.937 6.494 1.256 1.00 1.00 P
ATOM 26 OP1 A B 45 1.279 5.407 2.048 1.00 1.00 O
ATOM 27 OP2 A B 45 1.101 7.702 1.106 1.00 11.43 O
ATOM 28 O5' A B 45 3.327 6.872 1.914 1.00 1.00 O
TER
ATOM 2 P G A 9 6.488 2.538 -1.824 1.00 1.00 P
ATOM 3 OP1 G A 9 5.178 1.890 -1.510 1.00 1.00 O
ATOM 4 OP2 G A 9 7.466 2.632 -0.703 1.00 1.00 O
ATOM 5 O5' G A 9 7.122 1.849 -3.095 1.00 1.00 O
ATOM 6 C5' G A 9 7.638 0.493 -2.900 1.00 1.00 C
ATOM 7 C4' G A 9 8.370 0.351 -4.246 1.00 1.00 C
ATOM 8 O4' G A 9 7.491 0.715 -5.247 1.00 1.00 O
ATOM 9 C3' G A 9 9.569 1.269 -4.320 1.00 1.00 C
ATOM 10 O3' G A 9 10.676 0.655 -3.693 1.00 1.00 O
ATOM 11 C2' G A 9 9.686 1.424 -5.815 1.00 1.00 C
ATOM 12 O2' G A 9 10.400 0.250 -6.189 1.00 5.96 O
ATOM 13 C1' G A 9 8.241 1.384 -6.279 1.00 1.00 C
ATOM 14 N9 G A 9 7.786 2.740 -6.578 1.00 1.00 N
ATOM 15 C8 G A 9 6.740 3.449 -6.055 1.00 2.49 C
ATOM 16 N7 G A 9 6.599 4.664 -6.548 1.00 3.53 N
ATOM 17 C5 G A 9 7.638 4.745 -7.475 1.00 1.00 C
ATOM 18 C6 G A 9 8.032 5.805 -8.327 1.00 1.00 C
ATOM 19 O6 G A 9 7.509 6.905 -8.447 1.00 6.24 O
ATOM 20 N1 G A 9 9.108 5.515 -9.104 1.00 1.00 N
ATOM 21 C2 G A 9 9.754 4.327 -9.075 1.00 1.00 C
ATOM 22 N2 G A 9 10.787 4.232 -9.912 1.00 1.00 N
ATOM 23 N3 G A 9 9.428 3.307 -8.282 1.00 2.34 N
ATOM 24 C4 G A 9 8.364 3.578 -7.505 1.00 1.00 C
ATOM 25 P U A 10 12.054 1.384 -3.438 1.00 1.00 P
ATOM 26 OP1 U A 10 13.075 0.412 -2.960 1.00 1.00 O
ATOM 27 OP2 U A 10 11.802 2.477 -2.482 1.00 1.00 O
ATOM 28 O5' U A 10 12.460 1.924 -4.874 1.00 1.00 O
TER
ATOM 1 O3' A B 43 -3.567 8.539 -2.332 1.00 3.38 O
ATOM 2 P G B 44 -2.589 8.336 -1.091 1.00 5.02 P
ATOM 3 OP1 G B 44 -3.124 7.317 -0.134 1.00 10.17 O
ATOM 4 OP2 G B 44 -2.417 9.686 -0.523 1.00 5.22 O
ATOM 5 O5' G B 44 -1.316 7.749 -1.824 1.00 1.00 O
ATOM 6 C5' G B 44 -0.744 6.581 -1.181 1.00 1.00 C
ATOM 7 C4' G B 44 0.523 6.284 -1.958 1.00 3.05 C
ATOM 8 O4' G B 44 0.474 6.851 -3.259 1.00 7.36 O
ATOM 9 C3' G B 44 1.820 6.804 -1.345 1.00 3.39 C
ATOM 10 O3' G B 44 2.282 6.008 -0.239 1.00 4.71 O
ATOM 11 C2' G B 44 2.743 6.804 -2.542 1.00 1.00 C
ATOM 12 O2' G B 44 3.253 5.501 -2.706 1.00 1.16 O
ATOM 13 C1' G B 44 1.771 7.168 -3.693 1.00 1.01 C
ATOM 14 N9 G B 44 2.097 8.566 -3.977 1.00 1.00 N
ATOM 15 C8 G B 44 1.605 9.733 -3.513 1.00 2.95 C
ATOM 16 N7 G B 44 2.226 10.786 -4.007 1.00 7.11 N
ATOM 17 C5 G B 44 3.210 10.253 -4.814 1.00 1.00 C
ATOM 18 C6 G B 44 4.207 10.861 -5.621 1.00 1.00 C
ATOM 19 O6 G B 44 4.403 12.076 -5.756 1.00 1.00 O
ATOM 20 N1 G B 44 5.006 9.976 -6.294 1.00 1.00 N
ATOM 21 C2 G B 44 4.846 8.633 -6.204 1.00 1.93 C
ATOM 22 N2 G B 44 5.695 7.844 -6.892 1.00 12.68 N
ATOM 23 N3 G B 44 3.924 8.019 -5.472 1.00 1.00 N
ATOM 24 C4 G B 44 3.155 8.890 -4.799 1.00 1.00 C
ATOM 25 P A B 45 1.937 6.494 1.256 1.00 1.00 P
ATOM 26 OP1 A B 45 1.279 5.407 2.048 1.00 1.00 O
ATOM 27 OP2 A B 45 1.101 7.702 1.106 1.00 11.43 O
ATOM 28 O5' A B 45 3.327 6.872 1.914 1.00 1.00 O
TER
Atoms:
OP1: (5.178,1.890,-1.510)
OP2: (7.466,2.632,-0.703)
C3': (9.569,1.269,-4.320)
C1': (8.241,1.384,-6.279)
C5': (7.638,0.493,-2.900)
O6: (7.509,6.905,-8.447)
O4': (7.491,0.715,-5.247)
C8: (6.740,3.449,-6.055)
C2: (9.754,4.327,-9.075)
C6: (8.032,5.805,-8.327)
C5: (7.638,4.745,-7.475)
C4: (8.364,3.578,-7.505)
P: (6.488,2.538,-1.824)
C4': (8.370,0.351,-4.246)
C2': (9.686,1.424,-5.815)
O2': (10.400,0.250,-6.189)
N1: (9.108,5.515,-9.104)
N2: (10.787,4.232,-9.912)
N3: (9.428,3.307,-8.282)
N7: (6.599,4.664,-6.548)
N9: (7.786,2.740,-6.578)
O5': (7.122,1.849,-3.095)
O3': (10.676,0.655,-3.693)
OP2: (7.466,2.632,-0.703)
C3': (9.569,1.269,-4.320)
C1': (8.241,1.384,-6.279)
C5': (7.638,0.493,-2.900)
O6: (7.509,6.905,-8.447)
O4': (7.491,0.715,-5.247)
C8: (6.740,3.449,-6.055)
C2: (9.754,4.327,-9.075)
C6: (8.032,5.805,-8.327)
C5: (7.638,4.745,-7.475)
C4: (8.364,3.578,-7.505)
P: (6.488,2.538,-1.824)
C4': (8.370,0.351,-4.246)
C2': (9.686,1.424,-5.815)
O2': (10.400,0.250,-6.189)
N1: (9.108,5.515,-9.104)
N2: (10.787,4.232,-9.912)
N3: (9.428,3.307,-8.282)
N7: (6.599,4.664,-6.548)
N9: (7.786,2.740,-6.578)
O5': (7.122,1.849,-3.095)
O3': (10.676,0.655,-3.693)
OP1: (-3.124,7.317,-0.134)
OP2: (-2.417,9.686,-0.523)
C3': (1.820,6.804,-1.345)
C1': (1.771,7.168,-3.693)
C5': (-0.744,6.581,-1.181)
O6: (4.403,12.076,-5.756)
O4': (0.474,6.851,-3.259)
C8: (1.605,9.733,-3.513)
C2: (4.846,8.633,-6.204)
C6: (4.207,10.861,-5.621)
C5: (3.210,10.253,-4.814)
C4: (3.155,8.890,-4.799)
P: (-2.589,8.336,-1.091)
C4': (0.523,6.284,-1.958)
C2': (2.743,6.804,-2.542)
O2': (3.253,5.501,-2.706)
N1: (5.006,9.976,-6.294)
N2: (5.695,7.844,-6.892)
N3: (3.924,8.019,-5.472)
N7: (2.226,10.786,-4.007)
N9: (2.097,8.566,-3.977)
O5': (-1.316,7.749,-1.824)
O3': (2.282,6.008,-0.239)
OP2: (-2.417,9.686,-0.523)
C3': (1.820,6.804,-1.345)
C1': (1.771,7.168,-3.693)
C5': (-0.744,6.581,-1.181)
O6: (4.403,12.076,-5.756)
O4': (0.474,6.851,-3.259)
C8: (1.605,9.733,-3.513)
C2: (4.846,8.633,-6.204)
C6: (4.207,10.861,-5.621)
C5: (3.210,10.253,-4.814)
C4: (3.155,8.890,-4.799)
P: (-2.589,8.336,-1.091)
C4': (0.523,6.284,-1.958)
C2': (2.743,6.804,-2.542)
O2': (3.253,5.501,-2.706)
N1: (5.006,9.976,-6.294)
N2: (5.695,7.844,-6.892)
N3: (3.924,8.019,-5.472)
N7: (2.226,10.786,-4.007)
N9: (2.097,8.566,-3.977)
O5': (-1.316,7.749,-1.824)
O3': (2.282,6.008,-0.239)
Image (generated by PyMOL):