ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01082:01197

Extra

PDB:
ATOM 1 O3' U A1081 31.691 103.174 124.375 1.00 38.67 O
ATOM 2 P A A1082 32.310 103.838 123.045 1.00 39.51 P
ATOM 3 OP1 A A1082 32.140 105.317 123.124 1.00 35.84 O
ATOM 4 OP2 A A1082 31.766 103.083 121.883 1.00 37.63 O
ATOM 5 O5' A A1082 33.865 103.518 123.124 1.00 40.59 O
ATOM 6 C5' A A1082 34.335 102.162 123.119 1.00 41.88 C
ATOM 7 C4' A A1082 35.340 101.968 122.013 1.00 43.79 C
ATOM 8 O4' A A1082 36.392 102.966 122.117 1.00 44.33 O
ATOM 9 C3' A A1082 36.044 100.619 122.011 1.00 45.47 C
ATOM 10 O3' A A1082 36.349 100.291 120.658 1.00 48.38 O
ATOM 11 C2' A A1082 37.328 100.928 122.777 1.00 43.99 C
ATOM 12 O2' A A1082 38.375 100.033 122.487 1.00 44.26 O
ATOM 13 C1' A A1082 37.646 102.323 122.245 1.00 43.57 C
ATOM 14 N9 A A1082 38.507 103.167 123.075 1.00 43.03 N
ATOM 15 C8 A A1082 38.914 102.991 124.374 1.00 43.55 C
ATOM 16 N7 A A1082 39.642 103.980 124.837 1.00 43.91 N
ATOM 17 C5 A A1082 39.730 104.859 123.767 1.00 42.77 C
ATOM 18 C6 A A1082 40.348 106.114 123.621 1.00 43.17 C
ATOM 19 N6 A A1082 41.010 106.733 124.599 1.00 42.87 N
ATOM 20 N1 A A1082 40.253 106.723 122.421 1.00 42.09 N
ATOM 21 C2 A A1082 39.573 106.109 121.445 1.00 41.40 C
ATOM 22 N3 A A1082 38.941 104.942 121.463 1.00 40.47 N
ATOM 23 C4 A A1082 39.056 104.361 122.669 1.00 42.39 C
ATOM 24 P A A1083 35.254 99.543 119.750 1.00 50.12 P
ATOM 25 OP1 A A1083 35.702 99.699 118.342 1.00 49.49 O
ATOM 26 OP2 A A1083 33.892 99.998 120.145 1.00 52.94 O
ATOM 27 O5' A A1083 35.379 98.018 120.172 1.00 46.40 O
TER

ATOM 1 O3' U B1196 39.669 111.450 126.302 1.00 39.19 O
ATOM 2 P C B1197 39.733 109.932 125.803 1.00 39.13 P
ATOM 3 OP1 C B1197 39.798 109.108 127.030 1.00 39.85 O
ATOM 4 OP2 C B1197 40.778 109.775 124.758 1.00 42.09 O
ATOM 5 O5' C B1197 38.295 109.729 125.154 1.00 40.52 O
ATOM 6 C5' C B1197 38.114 109.161 123.848 1.00 37.42 C
ATOM 7 C4' C B1197 36.951 108.205 123.879 1.00 37.10 C
ATOM 8 O4' C B1197 36.171 108.433 125.080 1.00 38.43 O
ATOM 9 C3' C B1197 35.959 108.347 122.743 1.00 37.20 C
ATOM 10 O3' C B1197 36.397 107.613 121.601 1.00 37.52 O
ATOM 11 C2' C B1197 34.687 107.752 123.349 1.00 36.75 C
ATOM 12 O2' C B1197 34.654 106.336 123.319 1.00 35.90 O
ATOM 13 C1' C B1197 34.801 108.200 124.810 1.00 36.41 C
ATOM 14 N1 C B1197 34.029 109.410 125.155 1.00 35.17 N
ATOM 15 C2 C B1197 32.664 109.280 125.390 1.00 34.38 C
ATOM 16 O2 C B1197 32.157 108.161 125.325 1.00 36.89 O
ATOM 17 N3 C B1197 31.930 110.373 125.685 1.00 35.42 N
ATOM 18 C4 C B1197 32.519 111.567 125.761 1.00 36.20 C
ATOM 19 N4 C B1197 31.753 112.623 126.049 1.00 38.35 N
ATOM 20 C5 C B1197 33.918 111.732 125.543 1.00 33.54 C
ATOM 21 C6 C B1197 34.628 110.638 125.243 1.00 34.22 C
ATOM 22 P G B1198 36.948 108.382 120.299 1.00 35.02 P
ATOM 23 OP1 G B1198 36.752 107.443 119.166 1.00 37.36 O
ATOM 24 OP2 G B1198 38.307 108.900 120.601 1.00 35.81 O
ATOM 25 O5' G B1198 35.979 109.626 120.093 1.00 33.16 O
TER

Atoms:
OP1: (32.140,105.317,123.124)
OP2: (31.766,103.083,121.883)
C3': (36.044,100.619,122.011)
C1': (37.646,102.323,122.245)
C5': (34.335,102.162,123.119)
O4': (36.392,102.966,122.117)
C8: (38.914,102.991,124.374)
O2': (38.375,100.033,122.487)
C6: (40.348,106.114,123.621)
C5: (39.730,104.859,123.767)
C4: (39.056,104.361,122.669)
P: (32.310,103.838,123.045)
C4': (35.340,101.968,122.013)
C2': (37.328,100.928,122.777)
C2: (39.573,106.109,121.445)
N1: (40.253,106.723,122.421)
N3: (38.941,104.942,121.463)
N6: (41.010,106.733,124.599)
N7: (39.642,103.980,124.837)
N9: (38.507,103.167,123.075)
O5': (33.865,103.518,123.124)
O3': (36.349,100.291,120.658)
C2: (32.664,109.280,125.390)
OP1: (39.798,109.108,127.030)
OP2: (40.778,109.775,124.758)
C4: (32.519,111.567,125.761)
O5': (38.295,109.729,125.154)
C3': (35.959,108.347,122.743)
C1': (34.801,108.200,124.810)
O4': (36.171,108.433,125.080)
C5': (38.114,109.161,123.848)
P: (39.733,109.932,125.803)
O2: (32.157,108.161,125.325)
C4': (36.951,108.205,123.879)
C2': (34.687,107.752,123.349)
O2': (34.654,106.336,123.319)
N1: (34.029,109.410,125.155)
N3: (31.930,110.373,125.685)
N4: (31.753,112.623,126.049)
C6: (34.628,110.638,125.243)
C5: (33.918,111.732,125.543)
O3': (36.397,107.613,121.601)
Image (generated by PyMOL):
PyMOL image
show in jmol