ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1046:A1047

Extra

PDB:
ATOM 1 O3' A A1045 23.251 92.829 100.376 1.00 38.01 O
ATOM 2 P G A1046 23.302 91.343 99.779 1.00 37.72 P
ATOM 3 OP1 G A1046 21.901 90.890 99.802 1.00 38.77 O
ATOM 4 OP2 G A1046 24.346 90.477 100.382 1.00 38.99 O
ATOM 5 O5' G A1046 23.689 91.605 98.262 1.00 39.10 O
ATOM 6 C5' G A1046 25.021 91.988 97.902 1.00 40.23 C
ATOM 7 C4' G A1046 25.044 93.385 97.316 1.00 40.55 C
ATOM 8 O4' G A1046 26.410 93.845 97.259 1.00 39.95 O
ATOM 9 C3' G A1046 24.505 93.563 95.904 1.00 40.37 C
ATOM 10 O3' G A1046 24.125 94.928 95.730 1.00 40.49 O
ATOM 11 C2' G A1046 25.739 93.345 95.050 1.00 39.10 C
ATOM 12 O2' G A1046 25.599 94.034 93.824 1.00 39.58 O
ATOM 13 C1' G A1046 26.805 94.009 95.923 1.00 39.18 C
ATOM 14 N9 G A1046 28.182 93.538 95.833 1.00 38.44 N
ATOM 15 C8 G A1046 28.641 92.282 95.508 1.00 37.72 C
ATOM 16 N7 G A1046 29.942 92.197 95.514 1.00 37.39 N
ATOM 17 C5 G A1046 30.366 93.474 95.862 1.00 38.43 C
ATOM 18 C6 G A1046 31.675 94.006 96.005 1.00 38.84 C
ATOM 19 O6 G A1046 32.761 93.439 95.836 1.00 39.33 O
ATOM 20 N1 G A1046 31.643 95.347 96.372 1.00 37.58 N
ATOM 21 C2 G A1046 30.504 96.086 96.564 1.00 36.93 C
ATOM 22 N2 G A1046 30.677 97.369 96.890 1.00 37.48 N
ATOM 23 N3 G A1046 29.285 95.605 96.435 1.00 36.58 N
ATOM 24 C4 G A1046 29.290 94.305 96.077 1.00 37.83 C
ATOM 25 P A A1047 22.683 95.414 96.207 1.00 40.75 P
ATOM 26 OP1 A A1047 22.779 95.702 97.643 1.00 38.18 O
ATOM 27 OP2 A A1047 21.679 94.467 95.717 1.00 39.79 O
ATOM 28 O5' A A1047 22.475 96.779 95.436 1.00 41.27 O
TER

ATOM 1 O3' G B1046 24.125 94.928 95.730 1.00 40.49 O
ATOM 2 P A B1047 22.683 95.414 96.207 1.00 40.75 P
ATOM 3 OP1 A B1047 22.779 95.702 97.643 1.00 38.18 O
ATOM 4 OP2 A B1047 21.679 94.467 95.717 1.00 39.79 O
ATOM 5 O5' A B1047 22.475 96.779 95.436 1.00 41.27 O
ATOM 6 C5' A B1047 21.212 97.456 95.470 1.00 42.17 C
ATOM 7 C4' A B1047 21.068 98.283 94.230 1.00 42.40 C
ATOM 8 O4' A B1047 22.288 99.054 94.085 1.00 42.39 O
ATOM 9 C3' A B1047 20.960 97.465 92.955 1.00 43.57 C
ATOM 10 O3' A B1047 20.191 98.191 92.015 1.00 44.12 O
ATOM 11 C2' A B1047 22.410 97.313 92.516 1.00 42.92 C
ATOM 12 O2' A B1047 22.618 97.078 91.136 1.00 45.00 O
ATOM 13 C1' A B1047 22.974 98.661 92.915 1.00 41.72 C
ATOM 14 N9 A B1047 24.404 98.594 93.199 1.00 40.89 N
ATOM 15 C8 A B1047 25.143 97.644 93.872 1.00 41.09 C
ATOM 16 N7 A B1047 26.431 97.902 93.900 1.00 40.45 N
ATOM 17 C5 A B1047 26.541 99.102 93.217 1.00 39.80 C
ATOM 18 C6 A B1047 27.641 99.909 92.909 1.00 38.98 C
ATOM 19 N6 A B1047 28.895 99.623 93.257 1.00 36.42 N
ATOM 20 N1 A B1047 27.409 101.037 92.219 1.00 38.88 N
ATOM 21 C2 A B1047 26.150 101.325 91.862 1.00 39.67 C
ATOM 22 N3 A B1047 25.034 100.649 92.089 1.00 38.47 N
ATOM 23 C4 A B1047 25.301 99.536 92.781 1.00 40.08 C
ATOM 24 P G B1048 19.299 97.394 90.961 1.00 45.43 P
ATOM 25 OP1 G B1048 18.029 97.007 91.635 1.00 45.24 O
ATOM 26 OP2 G B1048 20.169 96.338 90.397 1.00 44.98 O
ATOM 27 O5' G B1048 19.008 98.483 89.842 1.00 44.67 O
TER

Atoms:
OP1: (21.901,90.890,99.802)
OP2: (24.346,90.477,100.382)
C3': (24.505,93.563,95.904)
C1': (26.805,94.009,95.923)
C5': (25.021,91.988,97.902)
O6: (32.761,93.439,95.836)
O4': (26.410,93.845,97.259)
C8: (28.641,92.282,95.508)
C2: (30.504,96.086,96.564)
C6: (31.675,94.006,96.005)
C5: (30.366,93.474,95.862)
C4: (29.290,94.305,96.077)
P: (23.302,91.343,99.779)
C4': (25.044,93.385,97.316)
C2': (25.739,93.345,95.050)
O2': (25.599,94.034,93.824)
N1: (31.643,95.347,96.372)
N2: (30.677,97.369,96.890)
N3: (29.285,95.605,96.435)
N7: (29.942,92.197,95.514)
N9: (28.182,93.538,95.833)
O5': (23.689,91.605,98.262)
O3': (24.125,94.928,95.730)
OP1: (22.779,95.702,97.643)
OP2: (21.679,94.467,95.717)
C3': (20.960,97.465,92.955)
C1': (22.974,98.661,92.915)
C5': (21.212,97.456,95.470)
O4': (22.288,99.054,94.085)
C8: (25.143,97.644,93.872)
O2': (22.618,97.078,91.136)
C6: (27.641,99.909,92.909)
C5: (26.541,99.102,93.217)
C4: (25.301,99.536,92.781)
P: (22.683,95.414,96.207)
C4': (21.068,98.283,94.230)
C2': (22.410,97.313,92.516)
C2: (26.150,101.325,91.862)
N1: (27.409,101.037,92.219)
N3: (25.034,100.649,92.089)
N6: (28.895,99.623,93.257)
N7: (26.431,97.902,93.900)
N9: (24.404,98.594,93.199)
O5': (22.475,96.779,95.436)
O3': (20.191,98.191,92.015)
Image (generated by PyMOL):
PyMOL image
show in jmol