Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:H9:H43
Extra
PDB:
ATOM 1 O3' C A 8 -5.848 38.620 82.142 1.00 36.17 O
ATOM 2 P G A 9 -4.245 38.707 82.096 1.00 35.43 P
ATOM 3 OP1 G A 9 -3.729 38.090 83.345 1.00 34.46 O
ATOM 4 OP2 G A 9 -3.873 40.107 81.760 1.00 33.50 O
ATOM 5 O5' G A 9 -3.844 37.769 80.873 1.00 33.42 O
ATOM 6 C5' G A 9 -2.477 37.516 80.561 1.00 33.93 C
ATOM 7 C4' G A 9 -2.370 36.772 79.251 1.00 34.53 C
ATOM 8 O4' G A 9 -3.044 35.493 79.374 1.00 35.41 O
ATOM 9 C3' G A 9 -3.041 37.443 78.063 1.00 34.36 C
ATOM 10 O3' G A 9 -2.164 38.384 77.455 1.00 35.44 O
ATOM 11 C2' G A 9 -3.324 36.262 77.144 1.00 34.84 C
ATOM 12 O2' G A 9 -2.189 35.851 76.407 1.00 32.48 O
ATOM 13 C1' G A 9 -3.700 35.178 78.156 1.00 34.91 C
ATOM 14 N9 G A 9 -5.133 35.102 78.422 1.00 34.43 N
ATOM 15 C8 G A 9 -5.758 35.266 79.635 1.00 32.99 C
ATOM 16 N7 G A 9 -7.054 35.134 79.566 1.00 32.27 N
ATOM 17 C5 G A 9 -7.303 34.869 78.226 1.00 31.63 C
ATOM 18 C6 G A 9 -8.527 34.635 77.547 1.00 30.50 C
ATOM 19 O6 G A 9 -9.674 34.609 78.011 1.00 30.02 O
ATOM 20 N1 G A 9 -8.323 34.413 76.190 1.00 29.33 N
ATOM 21 C2 G A 9 -7.101 34.414 75.564 1.00 29.72 C
ATOM 22 N2 G A 9 -7.113 34.178 74.244 1.00 30.69 N
ATOM 23 N3 G A 9 -5.953 34.629 76.184 1.00 29.87 N
ATOM 24 C4 G A 9 -6.127 34.847 77.505 1.00 32.31 C
ATOM 25 P U A 10 -2.759 39.740 76.830 1.00 34.89 P
ATOM 26 OP1 U A 10 -1.608 40.622 76.511 1.00 35.22 O
ATOM 27 OP2 U A 10 -3.837 40.235 77.723 1.00 33.28 O
ATOM 28 O5' U A 10 -3.425 39.275 75.461 1.00 31.72 O
TER
ATOM 1 O3' U B 42 -10.649 32.817 89.152 1.00 47.58 O
ATOM 2 P G B 43 -10.597 34.361 89.590 1.00 50.70 P
ATOM 3 OP1 G B 43 -9.782 34.469 90.828 1.00 49.52 O
ATOM 4 OP2 G B 43 -11.992 34.869 89.583 1.00 51.55 O
ATOM 5 O5' G B 43 -9.802 35.071 88.407 1.00 48.21 O
ATOM 6 C5' G B 43 -8.428 34.783 88.181 1.00 45.60 C
ATOM 7 C4' G B 43 -8.024 35.234 86.800 1.00 44.19 C
ATOM 8 O4' G B 43 -8.805 34.506 85.817 1.00 43.43 O
ATOM 9 C3' G B 43 -8.303 36.692 86.482 1.00 42.62 C
ATOM 10 O3' G B 43 -7.252 37.523 86.959 1.00 43.98 O
ATOM 11 C2' G B 43 -8.365 36.679 84.961 1.00 41.65 C
ATOM 12 O2' G B 43 -7.083 36.687 84.366 1.00 39.55 O
ATOM 13 C1' G B 43 -9.055 35.337 84.698 1.00 41.30 C
ATOM 14 N9 G B 43 -10.500 35.457 84.532 1.00 41.32 N
ATOM 15 C8 G B 43 -11.416 35.844 85.480 1.00 40.69 C
ATOM 16 N7 G B 43 -12.640 35.876 85.027 1.00 40.81 N
ATOM 17 C5 G B 43 -12.525 35.483 83.701 1.00 42.32 C
ATOM 18 C6 G B 43 -13.517 35.333 82.697 1.00 43.21 C
ATOM 19 O6 G B 43 -14.735 35.530 82.779 1.00 46.24 O
ATOM 20 N1 G B 43 -12.965 34.910 81.493 1.00 42.20 N
ATOM 21 C2 G B 43 -11.633 34.665 81.278 1.00 42.39 C
ATOM 22 N2 G B 43 -11.299 34.259 80.046 1.00 44.82 N
ATOM 23 N3 G B 43 -10.698 34.805 82.202 1.00 42.54 N
ATOM 24 C4 G B 43 -11.212 35.214 83.382 1.00 42.13 C
ATOM 25 P G B 44 -7.591 38.992 87.514 1.00 44.84 P
ATOM 26 OP1 G B 44 -6.430 39.449 88.320 1.00 44.47 O
ATOM 27 OP2 G B 44 -8.942 38.953 88.128 1.00 44.89 O
ATOM 28 O5' G B 44 -7.663 39.893 86.203 1.00 43.19 O
TER
ATOM 2 P G A 9 -4.245 38.707 82.096 1.00 35.43 P
ATOM 3 OP1 G A 9 -3.729 38.090 83.345 1.00 34.46 O
ATOM 4 OP2 G A 9 -3.873 40.107 81.760 1.00 33.50 O
ATOM 5 O5' G A 9 -3.844 37.769 80.873 1.00 33.42 O
ATOM 6 C5' G A 9 -2.477 37.516 80.561 1.00 33.93 C
ATOM 7 C4' G A 9 -2.370 36.772 79.251 1.00 34.53 C
ATOM 8 O4' G A 9 -3.044 35.493 79.374 1.00 35.41 O
ATOM 9 C3' G A 9 -3.041 37.443 78.063 1.00 34.36 C
ATOM 10 O3' G A 9 -2.164 38.384 77.455 1.00 35.44 O
ATOM 11 C2' G A 9 -3.324 36.262 77.144 1.00 34.84 C
ATOM 12 O2' G A 9 -2.189 35.851 76.407 1.00 32.48 O
ATOM 13 C1' G A 9 -3.700 35.178 78.156 1.00 34.91 C
ATOM 14 N9 G A 9 -5.133 35.102 78.422 1.00 34.43 N
ATOM 15 C8 G A 9 -5.758 35.266 79.635 1.00 32.99 C
ATOM 16 N7 G A 9 -7.054 35.134 79.566 1.00 32.27 N
ATOM 17 C5 G A 9 -7.303 34.869 78.226 1.00 31.63 C
ATOM 18 C6 G A 9 -8.527 34.635 77.547 1.00 30.50 C
ATOM 19 O6 G A 9 -9.674 34.609 78.011 1.00 30.02 O
ATOM 20 N1 G A 9 -8.323 34.413 76.190 1.00 29.33 N
ATOM 21 C2 G A 9 -7.101 34.414 75.564 1.00 29.72 C
ATOM 22 N2 G A 9 -7.113 34.178 74.244 1.00 30.69 N
ATOM 23 N3 G A 9 -5.953 34.629 76.184 1.00 29.87 N
ATOM 24 C4 G A 9 -6.127 34.847 77.505 1.00 32.31 C
ATOM 25 P U A 10 -2.759 39.740 76.830 1.00 34.89 P
ATOM 26 OP1 U A 10 -1.608 40.622 76.511 1.00 35.22 O
ATOM 27 OP2 U A 10 -3.837 40.235 77.723 1.00 33.28 O
ATOM 28 O5' U A 10 -3.425 39.275 75.461 1.00 31.72 O
TER
ATOM 1 O3' U B 42 -10.649 32.817 89.152 1.00 47.58 O
ATOM 2 P G B 43 -10.597 34.361 89.590 1.00 50.70 P
ATOM 3 OP1 G B 43 -9.782 34.469 90.828 1.00 49.52 O
ATOM 4 OP2 G B 43 -11.992 34.869 89.583 1.00 51.55 O
ATOM 5 O5' G B 43 -9.802 35.071 88.407 1.00 48.21 O
ATOM 6 C5' G B 43 -8.428 34.783 88.181 1.00 45.60 C
ATOM 7 C4' G B 43 -8.024 35.234 86.800 1.00 44.19 C
ATOM 8 O4' G B 43 -8.805 34.506 85.817 1.00 43.43 O
ATOM 9 C3' G B 43 -8.303 36.692 86.482 1.00 42.62 C
ATOM 10 O3' G B 43 -7.252 37.523 86.959 1.00 43.98 O
ATOM 11 C2' G B 43 -8.365 36.679 84.961 1.00 41.65 C
ATOM 12 O2' G B 43 -7.083 36.687 84.366 1.00 39.55 O
ATOM 13 C1' G B 43 -9.055 35.337 84.698 1.00 41.30 C
ATOM 14 N9 G B 43 -10.500 35.457 84.532 1.00 41.32 N
ATOM 15 C8 G B 43 -11.416 35.844 85.480 1.00 40.69 C
ATOM 16 N7 G B 43 -12.640 35.876 85.027 1.00 40.81 N
ATOM 17 C5 G B 43 -12.525 35.483 83.701 1.00 42.32 C
ATOM 18 C6 G B 43 -13.517 35.333 82.697 1.00 43.21 C
ATOM 19 O6 G B 43 -14.735 35.530 82.779 1.00 46.24 O
ATOM 20 N1 G B 43 -12.965 34.910 81.493 1.00 42.20 N
ATOM 21 C2 G B 43 -11.633 34.665 81.278 1.00 42.39 C
ATOM 22 N2 G B 43 -11.299 34.259 80.046 1.00 44.82 N
ATOM 23 N3 G B 43 -10.698 34.805 82.202 1.00 42.54 N
ATOM 24 C4 G B 43 -11.212 35.214 83.382 1.00 42.13 C
ATOM 25 P G B 44 -7.591 38.992 87.514 1.00 44.84 P
ATOM 26 OP1 G B 44 -6.430 39.449 88.320 1.00 44.47 O
ATOM 27 OP2 G B 44 -8.942 38.953 88.128 1.00 44.89 O
ATOM 28 O5' G B 44 -7.663 39.893 86.203 1.00 43.19 O
TER
Atoms:
OP1: (-3.729,38.090,83.345)
OP2: (-3.873,40.107,81.760)
C3': (-3.041,37.443,78.063)
C1': (-3.700,35.178,78.156)
C5': (-2.477,37.516,80.561)
O6: (-9.674,34.609,78.011)
O4': (-3.044,35.493,79.374)
C8: (-5.758,35.266,79.635)
C2: (-7.101,34.414,75.564)
C6: (-8.527,34.635,77.547)
C5: (-7.303,34.869,78.226)
C4: (-6.127,34.847,77.505)
P: (-4.245,38.707,82.096)
C4': (-2.370,36.772,79.251)
C2': (-3.324,36.262,77.144)
O2': (-2.189,35.851,76.407)
N1: (-8.323,34.413,76.190)
N2: (-7.113,34.178,74.244)
N3: (-5.953,34.629,76.184)
N7: (-7.054,35.134,79.566)
N9: (-5.133,35.102,78.422)
O5': (-3.844,37.769,80.873)
O3': (-2.164,38.384,77.455)
OP2: (-3.873,40.107,81.760)
C3': (-3.041,37.443,78.063)
C1': (-3.700,35.178,78.156)
C5': (-2.477,37.516,80.561)
O6: (-9.674,34.609,78.011)
O4': (-3.044,35.493,79.374)
C8: (-5.758,35.266,79.635)
C2: (-7.101,34.414,75.564)
C6: (-8.527,34.635,77.547)
C5: (-7.303,34.869,78.226)
C4: (-6.127,34.847,77.505)
P: (-4.245,38.707,82.096)
C4': (-2.370,36.772,79.251)
C2': (-3.324,36.262,77.144)
O2': (-2.189,35.851,76.407)
N1: (-8.323,34.413,76.190)
N2: (-7.113,34.178,74.244)
N3: (-5.953,34.629,76.184)
N7: (-7.054,35.134,79.566)
N9: (-5.133,35.102,78.422)
O5': (-3.844,37.769,80.873)
O3': (-2.164,38.384,77.455)
OP1: (-9.782,34.469,90.828)
OP2: (-11.992,34.869,89.583)
C3': (-8.303,36.692,86.482)
C1': (-9.055,35.337,84.698)
C5': (-8.428,34.783,88.181)
O6: (-14.735,35.530,82.779)
O4': (-8.805,34.506,85.817)
C8: (-11.416,35.844,85.480)
C2: (-11.633,34.665,81.278)
C6: (-13.517,35.333,82.697)
C5: (-12.525,35.483,83.701)
C4: (-11.212,35.214,83.382)
P: (-10.597,34.361,89.590)
C4': (-8.024,35.234,86.800)
C2': (-8.365,36.679,84.961)
O2': (-7.083,36.687,84.366)
N1: (-12.965,34.910,81.493)
N2: (-11.299,34.259,80.046)
N3: (-10.698,34.805,82.202)
N7: (-12.640,35.876,85.027)
N9: (-10.500,35.457,84.532)
O5': (-9.802,35.071,88.407)
O3': (-7.252,37.523,86.959)
OP2: (-11.992,34.869,89.583)
C3': (-8.303,36.692,86.482)
C1': (-9.055,35.337,84.698)
C5': (-8.428,34.783,88.181)
O6: (-14.735,35.530,82.779)
O4': (-8.805,34.506,85.817)
C8: (-11.416,35.844,85.480)
C2: (-11.633,34.665,81.278)
C6: (-13.517,35.333,82.697)
C5: (-12.525,35.483,83.701)
C4: (-11.212,35.214,83.382)
P: (-10.597,34.361,89.590)
C4': (-8.024,35.234,86.800)
C2': (-8.365,36.679,84.961)
O2': (-7.083,36.687,84.366)
N1: (-12.965,34.910,81.493)
N2: (-11.299,34.259,80.046)
N3: (-10.698,34.805,82.202)
N7: (-12.640,35.876,85.027)
N9: (-10.500,35.457,84.532)
O5': (-9.802,35.071,88.407)
O3': (-7.252,37.523,86.959)
Image (generated by PyMOL):