Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0345:0282
Extra
PDB:
ATOM 1 O3' C A 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 2 P A A 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 3 OP1 A A 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 4 OP2 A A 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 5 O5' A A 345 54.807 121.587 13.479 1.00 70.00 O
ATOM 6 C5' A A 345 55.992 121.658 12.691 1.00 72.09 C
ATOM 7 C4' A A 345 56.060 122.993 12.012 1.00 74.31 C
ATOM 8 O4' A A 345 55.032 123.051 10.985 1.00 75.94 O
ATOM 9 C3' A A 345 55.813 124.179 12.935 1.00 75.28 C
ATOM 10 O3' A A 345 56.639 125.255 12.526 1.00 77.35 O
ATOM 11 C2' A A 345 54.332 124.477 12.710 1.00 75.65 C
ATOM 12 O2' A A 345 53.976 125.821 12.962 1.00 75.50 O
ATOM 13 C1' A A 345 54.179 124.149 11.227 1.00 76.32 C
ATOM 14 N9 A A 345 52.817 123.773 10.843 1.00 77.47 N
ATOM 15 C8 A A 345 52.110 122.648 11.199 1.00 77.39 C
ATOM 16 N7 A A 345 50.892 122.612 10.712 1.00 78.03 N
ATOM 17 C5 A A 345 50.786 123.789 9.982 1.00 78.46 C
ATOM 18 C6 A A 345 49.730 124.352 9.229 1.00 78.01 C
ATOM 19 N6 A A 345 48.532 123.778 9.084 1.00 77.46 N
ATOM 20 N1 A A 345 49.952 125.543 8.626 1.00 78.05 N
ATOM 21 C2 A A 345 51.153 126.123 8.771 1.00 78.89 C
ATOM 22 N3 A A 345 52.222 125.696 9.452 1.00 79.52 N
ATOM 23 C4 A A 345 51.969 124.511 10.044 1.00 79.01 C
ATOM 24 P G A 346 58.080 125.447 13.208 1.00 78.69 P
ATOM 25 OP1 G A 346 58.382 124.223 13.986 1.00 78.28 O
ATOM 26 OP2 G A 346 58.082 126.766 13.882 1.00 78.92 O
ATOM 27 O5' G A 346 59.099 125.477 11.982 1.00 79.71 O
TER
ATOM 1 O3' A B 281 46.433 126.491 5.639 1.00 80.03 O
ATOM 2 P C B 282 45.465 126.269 6.900 1.00 80.94 P
ATOM 3 OP1 C B 282 44.569 127.450 7.012 1.00 80.89 O
ATOM 4 OP2 C B 282 46.304 125.870 8.062 1.00 81.17 O
ATOM 5 O5' C B 282 44.578 125.019 6.474 1.00 82.06 O
ATOM 6 C5' C B 282 43.785 125.055 5.276 1.00 83.49 C
ATOM 7 C4' C B 282 43.067 123.743 5.087 1.00 84.84 C
ATOM 8 O4' C B 282 44.038 122.678 4.917 1.00 85.36 O
ATOM 9 C3' C B 282 42.230 123.288 6.269 1.00 85.60 C
ATOM 10 O3' C B 282 40.953 123.898 6.269 1.00 87.61 O
ATOM 11 C2' C B 282 42.136 121.787 6.047 1.00 85.85 C
ATOM 12 O2' C B 282 41.140 121.430 5.109 1.00 86.00 O
ATOM 13 C1' C B 282 43.531 121.482 5.491 1.00 85.97 C
ATOM 14 N1 C B 282 44.460 121.024 6.537 1.00 86.28 N
ATOM 15 C2 C B 282 44.467 119.666 6.878 1.00 86.64 C
ATOM 16 O2 C B 282 43.729 118.882 6.253 1.00 87.05 O
ATOM 17 N3 C B 282 45.279 119.239 7.873 1.00 86.54 N
ATOM 18 C4 C B 282 46.074 120.106 8.504 1.00 85.37 C
ATOM 19 N4 C B 282 46.850 119.641 9.483 1.00 84.09 N
ATOM 20 C5 C B 282 46.106 121.489 8.159 1.00 85.86 C
ATOM 21 C6 C B 282 45.291 121.901 7.181 1.00 86.31 C
ATOM 22 P C B 283 40.299 124.362 7.658 1.00 90.00 P
ATOM 23 OP1 C B 283 38.909 124.798 7.356 1.00 90.33 O
ATOM 24 OP2 C B 283 41.240 125.309 8.315 1.00 91.02 O
ATOM 25 O5' C B 283 40.246 123.028 8.529 1.00 87.48 O
TER
ATOM 2 P A A 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 3 OP1 A A 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 4 OP2 A A 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 5 O5' A A 345 54.807 121.587 13.479 1.00 70.00 O
ATOM 6 C5' A A 345 55.992 121.658 12.691 1.00 72.09 C
ATOM 7 C4' A A 345 56.060 122.993 12.012 1.00 74.31 C
ATOM 8 O4' A A 345 55.032 123.051 10.985 1.00 75.94 O
ATOM 9 C3' A A 345 55.813 124.179 12.935 1.00 75.28 C
ATOM 10 O3' A A 345 56.639 125.255 12.526 1.00 77.35 O
ATOM 11 C2' A A 345 54.332 124.477 12.710 1.00 75.65 C
ATOM 12 O2' A A 345 53.976 125.821 12.962 1.00 75.50 O
ATOM 13 C1' A A 345 54.179 124.149 11.227 1.00 76.32 C
ATOM 14 N9 A A 345 52.817 123.773 10.843 1.00 77.47 N
ATOM 15 C8 A A 345 52.110 122.648 11.199 1.00 77.39 C
ATOM 16 N7 A A 345 50.892 122.612 10.712 1.00 78.03 N
ATOM 17 C5 A A 345 50.786 123.789 9.982 1.00 78.46 C
ATOM 18 C6 A A 345 49.730 124.352 9.229 1.00 78.01 C
ATOM 19 N6 A A 345 48.532 123.778 9.084 1.00 77.46 N
ATOM 20 N1 A A 345 49.952 125.543 8.626 1.00 78.05 N
ATOM 21 C2 A A 345 51.153 126.123 8.771 1.00 78.89 C
ATOM 22 N3 A A 345 52.222 125.696 9.452 1.00 79.52 N
ATOM 23 C4 A A 345 51.969 124.511 10.044 1.00 79.01 C
ATOM 24 P G A 346 58.080 125.447 13.208 1.00 78.69 P
ATOM 25 OP1 G A 346 58.382 124.223 13.986 1.00 78.28 O
ATOM 26 OP2 G A 346 58.082 126.766 13.882 1.00 78.92 O
ATOM 27 O5' G A 346 59.099 125.477 11.982 1.00 79.71 O
TER
ATOM 1 O3' A B 281 46.433 126.491 5.639 1.00 80.03 O
ATOM 2 P C B 282 45.465 126.269 6.900 1.00 80.94 P
ATOM 3 OP1 C B 282 44.569 127.450 7.012 1.00 80.89 O
ATOM 4 OP2 C B 282 46.304 125.870 8.062 1.00 81.17 O
ATOM 5 O5' C B 282 44.578 125.019 6.474 1.00 82.06 O
ATOM 6 C5' C B 282 43.785 125.055 5.276 1.00 83.49 C
ATOM 7 C4' C B 282 43.067 123.743 5.087 1.00 84.84 C
ATOM 8 O4' C B 282 44.038 122.678 4.917 1.00 85.36 O
ATOM 9 C3' C B 282 42.230 123.288 6.269 1.00 85.60 C
ATOM 10 O3' C B 282 40.953 123.898 6.269 1.00 87.61 O
ATOM 11 C2' C B 282 42.136 121.787 6.047 1.00 85.85 C
ATOM 12 O2' C B 282 41.140 121.430 5.109 1.00 86.00 O
ATOM 13 C1' C B 282 43.531 121.482 5.491 1.00 85.97 C
ATOM 14 N1 C B 282 44.460 121.024 6.537 1.00 86.28 N
ATOM 15 C2 C B 282 44.467 119.666 6.878 1.00 86.64 C
ATOM 16 O2 C B 282 43.729 118.882 6.253 1.00 87.05 O
ATOM 17 N3 C B 282 45.279 119.239 7.873 1.00 86.54 N
ATOM 18 C4 C B 282 46.074 120.106 8.504 1.00 85.37 C
ATOM 19 N4 C B 282 46.850 119.641 9.483 1.00 84.09 N
ATOM 20 C5 C B 282 46.106 121.489 8.159 1.00 85.86 C
ATOM 21 C6 C B 282 45.291 121.901 7.181 1.00 86.31 C
ATOM 22 P C B 283 40.299 124.362 7.658 1.00 90.00 P
ATOM 23 OP1 C B 283 38.909 124.798 7.356 1.00 90.33 O
ATOM 24 OP2 C B 283 41.240 125.309 8.315 1.00 91.02 O
ATOM 25 O5' C B 283 40.246 123.028 8.529 1.00 87.48 O
TER
Atoms:
OP1: (53.533,119.497,13.103)
OP2: (55.548,119.560,14.700)
C3': (55.813,124.179,12.935)
C1': (54.179,124.149,11.227)
C5': (55.992,121.658,12.691)
O4': (55.032,123.051,10.985)
C8: (52.110,122.648,11.199)
O2': (53.976,125.821,12.962)
C6: (49.730,124.352,9.229)
C5: (50.786,123.789,9.982)
C4: (51.969,124.511,10.044)
P: (54.344,120.214,14.123)
C4': (56.060,122.993,12.012)
C2': (54.332,124.477,12.710)
C2: (51.153,126.123,8.771)
N1: (49.952,125.543,8.626)
N3: (52.222,125.696,9.452)
N6: (48.532,123.778,9.084)
N7: (50.892,122.612,10.712)
N9: (52.817,123.773,10.843)
O5': (54.807,121.587,13.479)
O3': (56.639,125.255,12.526)
OP2: (55.548,119.560,14.700)
C3': (55.813,124.179,12.935)
C1': (54.179,124.149,11.227)
C5': (55.992,121.658,12.691)
O4': (55.032,123.051,10.985)
C8: (52.110,122.648,11.199)
O2': (53.976,125.821,12.962)
C6: (49.730,124.352,9.229)
C5: (50.786,123.789,9.982)
C4: (51.969,124.511,10.044)
P: (54.344,120.214,14.123)
C4': (56.060,122.993,12.012)
C2': (54.332,124.477,12.710)
C2: (51.153,126.123,8.771)
N1: (49.952,125.543,8.626)
N3: (52.222,125.696,9.452)
N6: (48.532,123.778,9.084)
N7: (50.892,122.612,10.712)
N9: (52.817,123.773,10.843)
O5': (54.807,121.587,13.479)
O3': (56.639,125.255,12.526)
C2: (44.467,119.666,6.878)
OP1: (44.569,127.450,7.012)
OP2: (46.304,125.870,8.062)
C4: (46.074,120.106,8.504)
O5': (44.578,125.019,6.474)
C3': (42.230,123.288,6.269)
C1': (43.531,121.482,5.491)
O4': (44.038,122.678,4.917)
C5': (43.785,125.055,5.276)
P: (45.465,126.269,6.900)
O2: (43.729,118.882,6.253)
C4': (43.067,123.743,5.087)
C2': (42.136,121.787,6.047)
O2': (41.140,121.430,5.109)
N1: (44.460,121.024,6.537)
N3: (45.279,119.239,7.873)
N4: (46.850,119.641,9.483)
C6: (45.291,121.901,7.181)
C5: (46.106,121.489,8.159)
O3': (40.953,123.898,6.269)
OP1: (44.569,127.450,7.012)
OP2: (46.304,125.870,8.062)
C4: (46.074,120.106,8.504)
O5': (44.578,125.019,6.474)
C3': (42.230,123.288,6.269)
C1': (43.531,121.482,5.491)
O4': (44.038,122.678,4.917)
C5': (43.785,125.055,5.276)
P: (45.465,126.269,6.900)
O2: (43.729,118.882,6.253)
C4': (43.067,123.743,5.087)
C2': (42.136,121.787,6.047)
O2': (41.140,121.430,5.109)
N1: (44.460,121.024,6.537)
N3: (45.279,119.239,7.873)
N4: (46.850,119.641,9.483)
C6: (45.291,121.901,7.181)
C5: (46.106,121.489,8.159)
O3': (40.953,123.898,6.269)
Image (generated by PyMOL):