Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0234:0235
Extra
PDB:
ATOM 1 O3' C A 233 92.137 111.236 -9.873 1.00 62.07 O
ATOM 2 P G A 234 93.611 111.872 -9.941 1.00 63.40 P
ATOM 3 OP1 G A 234 93.881 112.261 -11.360 1.00 65.78 O
ATOM 4 OP2 G A 234 94.548 110.954 -9.244 1.00 59.99 O
ATOM 5 O5' G A 234 93.454 113.202 -9.084 1.00 61.93 O
ATOM 6 C5' G A 234 92.314 114.061 -9.285 1.00 62.01 C
ATOM 7 C4' G A 234 92.368 115.232 -8.340 1.00 61.98 C
ATOM 8 O4' G A 234 92.156 114.752 -6.982 1.00 62.29 O
ATOM 9 C3' G A 234 93.693 115.985 -8.331 1.00 61.80 C
ATOM 10 O3' G A 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 11 C2' G A 234 94.407 115.413 -7.114 1.00 60.84 C
ATOM 12 O2' G A 234 95.342 116.293 -6.526 1.00 59.79 O
ATOM 13 C1' G A 234 93.242 115.137 -6.168 1.00 61.00 C
ATOM 14 N9 G A 234 93.545 114.045 -5.248 1.00 60.08 N
ATOM 15 C8 G A 234 94.187 112.869 -5.549 1.00 60.48 C
ATOM 16 N7 G A 234 94.407 112.124 -4.503 1.00 61.36 N
ATOM 17 C5 G A 234 93.858 112.841 -3.449 1.00 60.47 C
ATOM 18 C6 G A 234 93.818 112.547 -2.062 1.00 59.65 C
ATOM 19 O6 G A 234 94.296 111.572 -1.468 1.00 59.20 O
ATOM 20 N1 G A 234 93.151 113.538 -1.350 1.00 58.64 N
ATOM 21 C2 G A 234 92.605 114.673 -1.898 1.00 58.52 C
ATOM 22 N2 G A 234 91.989 115.505 -1.045 1.00 57.96 N
ATOM 23 N3 G A 234 92.657 114.969 -3.187 1.00 58.07 N
ATOM 24 C4 G A 234 93.294 114.016 -3.898 1.00 59.21 C
ATOM 25 P A A 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 26 OP1 A A 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 27 OP2 A A 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 28 O5' A A 235 93.191 119.701 -9.150 1.00 61.12 O
TER
ATOM 1 O3' G B 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 2 P A B 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 3 OP1 A B 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 4 OP2 A B 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 5 O5' A B 235 93.191 119.701 -9.150 1.00 61.12 O
ATOM 6 C5' A B 235 91.780 119.798 -9.444 1.00 59.36 C
ATOM 7 C4' A B 235 91.174 120.953 -8.682 1.00 60.12 C
ATOM 8 O4' A B 235 91.053 120.606 -7.268 1.00 59.16 O
ATOM 9 C3' A B 235 92.003 122.235 -8.727 1.00 59.41 C
ATOM 10 O3' A B 235 91.143 123.364 -8.653 1.00 60.94 O
ATOM 11 C2' A B 235 92.813 122.132 -7.440 1.00 58.18 C
ATOM 12 O2' A B 235 93.310 123.361 -6.960 1.00 58.04 O
ATOM 13 C1' A B 235 91.767 121.549 -6.494 1.00 58.25 C
ATOM 14 N9 A B 235 92.333 120.883 -5.323 1.00 56.96 N
ATOM 15 C8 A B 235 93.009 119.691 -5.260 1.00 56.59 C
ATOM 16 N7 A B 235 93.420 119.381 -4.057 1.00 55.24 N
ATOM 17 C5 A B 235 92.980 120.439 -3.272 1.00 55.22 C
ATOM 18 C6 A B 235 93.103 120.713 -1.900 1.00 53.26 C
ATOM 19 N6 A B 235 93.744 119.917 -1.043 1.00 52.69 N
ATOM 20 N1 A B 235 92.543 121.849 -1.433 1.00 51.88 N
ATOM 21 C2 A B 235 91.912 122.651 -2.293 1.00 53.20 C
ATOM 22 N3 A B 235 91.736 122.507 -3.604 1.00 55.72 N
ATOM 23 C4 A B 235 92.302 121.366 -4.037 1.00 55.25 C
ATOM 24 P A B 236 90.640 124.069 -10.002 1.00 61.69 P
ATOM 25 OP1 A B 236 91.740 123.943 -10.996 1.00 62.83 O
ATOM 26 OP2 A B 236 90.123 125.415 -9.639 1.00 61.86 O
ATOM 27 O5' A B 236 89.404 123.176 -10.466 1.00 59.69 O
TER
ATOM 2 P G A 234 93.611 111.872 -9.941 1.00 63.40 P
ATOM 3 OP1 G A 234 93.881 112.261 -11.360 1.00 65.78 O
ATOM 4 OP2 G A 234 94.548 110.954 -9.244 1.00 59.99 O
ATOM 5 O5' G A 234 93.454 113.202 -9.084 1.00 61.93 O
ATOM 6 C5' G A 234 92.314 114.061 -9.285 1.00 62.01 C
ATOM 7 C4' G A 234 92.368 115.232 -8.340 1.00 61.98 C
ATOM 8 O4' G A 234 92.156 114.752 -6.982 1.00 62.29 O
ATOM 9 C3' G A 234 93.693 115.985 -8.331 1.00 61.80 C
ATOM 10 O3' G A 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 11 C2' G A 234 94.407 115.413 -7.114 1.00 60.84 C
ATOM 12 O2' G A 234 95.342 116.293 -6.526 1.00 59.79 O
ATOM 13 C1' G A 234 93.242 115.137 -6.168 1.00 61.00 C
ATOM 14 N9 G A 234 93.545 114.045 -5.248 1.00 60.08 N
ATOM 15 C8 G A 234 94.187 112.869 -5.549 1.00 60.48 C
ATOM 16 N7 G A 234 94.407 112.124 -4.503 1.00 61.36 N
ATOM 17 C5 G A 234 93.858 112.841 -3.449 1.00 60.47 C
ATOM 18 C6 G A 234 93.818 112.547 -2.062 1.00 59.65 C
ATOM 19 O6 G A 234 94.296 111.572 -1.468 1.00 59.20 O
ATOM 20 N1 G A 234 93.151 113.538 -1.350 1.00 58.64 N
ATOM 21 C2 G A 234 92.605 114.673 -1.898 1.00 58.52 C
ATOM 22 N2 G A 234 91.989 115.505 -1.045 1.00 57.96 N
ATOM 23 N3 G A 234 92.657 114.969 -3.187 1.00 58.07 N
ATOM 24 C4 G A 234 93.294 114.016 -3.898 1.00 59.21 C
ATOM 25 P A A 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 26 OP1 A A 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 27 OP2 A A 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 28 O5' A A 235 93.191 119.701 -9.150 1.00 61.12 O
TER
ATOM 1 O3' G B 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 2 P A B 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 3 OP1 A B 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 4 OP2 A B 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 5 O5' A B 235 93.191 119.701 -9.150 1.00 61.12 O
ATOM 6 C5' A B 235 91.780 119.798 -9.444 1.00 59.36 C
ATOM 7 C4' A B 235 91.174 120.953 -8.682 1.00 60.12 C
ATOM 8 O4' A B 235 91.053 120.606 -7.268 1.00 59.16 O
ATOM 9 C3' A B 235 92.003 122.235 -8.727 1.00 59.41 C
ATOM 10 O3' A B 235 91.143 123.364 -8.653 1.00 60.94 O
ATOM 11 C2' A B 235 92.813 122.132 -7.440 1.00 58.18 C
ATOM 12 O2' A B 235 93.310 123.361 -6.960 1.00 58.04 O
ATOM 13 C1' A B 235 91.767 121.549 -6.494 1.00 58.25 C
ATOM 14 N9 A B 235 92.333 120.883 -5.323 1.00 56.96 N
ATOM 15 C8 A B 235 93.009 119.691 -5.260 1.00 56.59 C
ATOM 16 N7 A B 235 93.420 119.381 -4.057 1.00 55.24 N
ATOM 17 C5 A B 235 92.980 120.439 -3.272 1.00 55.22 C
ATOM 18 C6 A B 235 93.103 120.713 -1.900 1.00 53.26 C
ATOM 19 N6 A B 235 93.744 119.917 -1.043 1.00 52.69 N
ATOM 20 N1 A B 235 92.543 121.849 -1.433 1.00 51.88 N
ATOM 21 C2 A B 235 91.912 122.651 -2.293 1.00 53.20 C
ATOM 22 N3 A B 235 91.736 122.507 -3.604 1.00 55.72 N
ATOM 23 C4 A B 235 92.302 121.366 -4.037 1.00 55.25 C
ATOM 24 P A B 236 90.640 124.069 -10.002 1.00 61.69 P
ATOM 25 OP1 A B 236 91.740 123.943 -10.996 1.00 62.83 O
ATOM 26 OP2 A B 236 90.123 125.415 -9.639 1.00 61.86 O
ATOM 27 O5' A B 236 89.404 123.176 -10.466 1.00 59.69 O
TER
Atoms:
OP1: (93.881,112.261,-11.360)
OP2: (94.548,110.954,-9.244)
C3': (93.693,115.985,-8.331)
C1': (93.242,115.137,-6.168)
C5': (92.314,114.061,-9.285)
O6: (94.296,111.572,-1.468)
O4': (92.156,114.752,-6.982)
C8: (94.187,112.869,-5.549)
C2: (92.605,114.673,-1.898)
C6: (93.818,112.547,-2.062)
C5: (93.858,112.841,-3.449)
C4: (93.294,114.016,-3.898)
P: (93.611,111.872,-9.941)
C4': (92.368,115.232,-8.340)
C2': (94.407,115.413,-7.114)
O2': (95.342,116.293,-6.526)
N1: (93.151,113.538,-1.350)
N2: (91.989,115.505,-1.045)
N3: (92.657,114.969,-3.187)
N7: (94.407,112.124,-4.503)
N9: (93.545,114.045,-5.248)
O5': (93.454,113.202,-9.084)
O3': (93.479,117.381,-8.215)
OP2: (94.548,110.954,-9.244)
C3': (93.693,115.985,-8.331)
C1': (93.242,115.137,-6.168)
C5': (92.314,114.061,-9.285)
O6: (94.296,111.572,-1.468)
O4': (92.156,114.752,-6.982)
C8: (94.187,112.869,-5.549)
C2: (92.605,114.673,-1.898)
C6: (93.818,112.547,-2.062)
C5: (93.858,112.841,-3.449)
C4: (93.294,114.016,-3.898)
P: (93.611,111.872,-9.941)
C4': (92.368,115.232,-8.340)
C2': (94.407,115.413,-7.114)
O2': (95.342,116.293,-6.526)
N1: (93.151,113.538,-1.350)
N2: (91.989,115.505,-1.045)
N3: (92.657,114.969,-3.187)
N7: (94.407,112.124,-4.503)
N9: (93.545,114.045,-5.248)
O5': (93.454,113.202,-9.084)
O3': (93.479,117.381,-8.215)
OP1: (93.506,117.756,-10.672)
OP2: (95.443,118.576,-9.198)
C3': (92.003,122.235,-8.727)
C1': (91.767,121.549,-6.494)
C5': (91.780,119.798,-9.444)
O4': (91.053,120.606,-7.268)
C8: (93.009,119.691,-5.260)
O2': (93.310,123.361,-6.960)
C6: (93.103,120.713,-1.900)
C5: (92.980,120.439,-3.272)
C4: (92.302,121.366,-4.037)
P: (93.986,118.345,-9.396)
C4': (91.174,120.953,-8.682)
C2': (92.813,122.132,-7.440)
C2: (91.912,122.651,-2.293)
N1: (92.543,121.849,-1.433)
N3: (91.736,122.507,-3.604)
N6: (93.744,119.917,-1.043)
N7: (93.420,119.381,-4.057)
N9: (92.333,120.883,-5.323)
O5': (93.191,119.701,-9.150)
O3': (91.143,123.364,-8.653)
OP2: (95.443,118.576,-9.198)
C3': (92.003,122.235,-8.727)
C1': (91.767,121.549,-6.494)
C5': (91.780,119.798,-9.444)
O4': (91.053,120.606,-7.268)
C8: (93.009,119.691,-5.260)
O2': (93.310,123.361,-6.960)
C6: (93.103,120.713,-1.900)
C5: (92.980,120.439,-3.272)
C4: (92.302,121.366,-4.037)
P: (93.986,118.345,-9.396)
C4': (91.174,120.953,-8.682)
C2': (92.813,122.132,-7.440)
C2: (91.912,122.651,-2.293)
N1: (92.543,121.849,-1.433)
N3: (91.736,122.507,-3.604)
N6: (93.744,119.917,-1.043)
N7: (93.420,119.381,-4.057)
N9: (92.333,120.883,-5.323)
O5': (93.191,119.701,-9.150)
O3': (91.143,123.364,-8.653)
Image (generated by PyMOL):