Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A682:A719
Extra
PDB:
ATOM 1 O3' A A 681 66.695 72.803 40.150 1.00 61.41 O
ATOM 2 P A A 682 65.634 72.247 39.062 1.00 62.73 P
ATOM 3 OP1 A A 682 65.728 73.196 37.902 1.00 62.64 O
ATOM 4 OP2 A A 682 64.310 72.015 39.688 1.00 62.47 O
ATOM 5 O5' A A 682 66.234 70.820 38.646 1.00 62.21 O
ATOM 6 C5' A A 682 67.482 70.719 37.903 1.00 63.16 C
ATOM 7 C4' A A 682 67.979 69.278 37.832 1.00 64.34 C
ATOM 8 O4' A A 682 68.305 68.805 39.161 1.00 65.91 O
ATOM 9 C3' A A 682 67.029 68.226 37.271 1.00 65.04 C
ATOM 10 O3' A A 682 67.059 68.210 35.842 1.00 65.68 O
ATOM 11 C2' A A 682 67.577 66.938 37.883 1.00 65.30 C
ATOM 12 O2' A A 682 68.735 66.436 37.240 1.00 64.40 O
ATOM 13 C1' A A 682 67.962 67.428 39.279 1.00 65.55 C
ATOM 14 N9 A A 682 66.819 67.318 40.185 1.00 65.06 N
ATOM 15 C8 A A 682 65.779 68.200 40.343 1.00 65.06 C
ATOM 16 N7 A A 682 64.871 67.795 41.194 1.00 65.62 N
ATOM 17 C5 A A 682 65.352 66.571 41.639 1.00 65.33 C
ATOM 18 C6 A A 682 64.844 65.629 42.561 1.00 65.31 C
ATOM 19 N6 A A 682 63.701 65.790 43.235 1.00 65.12 N
ATOM 20 N1 A A 682 65.565 64.509 42.774 1.00 65.47 N
ATOM 21 C2 A A 682 66.727 64.367 42.117 1.00 66.06 C
ATOM 22 N3 A A 682 67.310 65.187 41.238 1.00 64.95 N
ATOM 23 C4 A A 682 66.557 66.276 41.037 1.00 64.74 C
ATOM 24 P C A 683 65.680 68.194 34.991 1.00 65.56 P
ATOM 25 OP1 C A 683 66.032 67.701 33.642 1.00 66.14 O
ATOM 26 OP2 C A 683 64.944 69.479 35.121 1.00 65.28 O
ATOM 27 O5' C A 683 64.810 67.049 35.666 1.00 64.12 O
TER
ATOM 1 O3' U B 718 59.387 63.549 44.379 1.00 55.68 O
ATOM 2 P C B 719 60.764 62.859 44.826 1.00 57.43 P
ATOM 3 OP1 C B 719 61.777 63.258 43.833 1.00 58.22 O
ATOM 4 OP2 C B 719 60.460 61.424 45.029 1.00 58.52 O
ATOM 5 O5' C B 719 61.148 63.537 46.220 1.00 57.49 O
ATOM 6 C5' C B 719 61.611 64.910 46.293 1.00 56.22 C
ATOM 7 C4' C B 719 62.026 65.237 47.712 1.00 54.94 C
ATOM 8 O4' C B 719 60.868 65.231 48.592 1.00 53.27 O
ATOM 9 C3' C B 719 62.945 64.190 48.316 1.00 55.05 C
ATOM 10 O3' C B 719 64.280 64.404 47.911 1.00 57.05 O
ATOM 11 C2' C B 719 62.723 64.350 49.810 1.00 53.54 C
ATOM 12 O2' C B 719 63.466 65.415 50.365 1.00 53.49 O
ATOM 13 C1' C B 719 61.225 64.668 49.848 1.00 53.16 C
ATOM 14 N1 C B 719 60.371 63.487 50.104 1.00 51.64 N
ATOM 15 C2 C B 719 59.928 63.244 51.414 1.00 50.73 C
ATOM 16 O2 C B 719 60.245 64.030 52.316 1.00 49.63 O
ATOM 17 N3 C B 719 59.172 62.156 51.664 1.00 50.14 N
ATOM 18 C4 C B 719 58.856 61.321 50.672 1.00 51.34 C
ATOM 19 N4 C B 719 58.127 60.234 50.968 1.00 52.94 N
ATOM 20 C5 C B 719 59.276 61.550 49.330 1.00 51.91 C
ATOM 21 C6 C B 719 60.024 62.635 49.093 1.00 51.85 C
ATOM 22 P U B 720 65.303 63.175 47.902 1.00 59.57 P
ATOM 23 OP1 U B 720 66.626 63.671 47.447 1.00 60.16 O
ATOM 24 OP2 U B 720 64.655 62.044 47.187 1.00 59.45 O
ATOM 25 O5' U B 720 65.455 62.817 49.441 1.00 61.89 O
TER
ATOM 2 P A A 682 65.634 72.247 39.062 1.00 62.73 P
ATOM 3 OP1 A A 682 65.728 73.196 37.902 1.00 62.64 O
ATOM 4 OP2 A A 682 64.310 72.015 39.688 1.00 62.47 O
ATOM 5 O5' A A 682 66.234 70.820 38.646 1.00 62.21 O
ATOM 6 C5' A A 682 67.482 70.719 37.903 1.00 63.16 C
ATOM 7 C4' A A 682 67.979 69.278 37.832 1.00 64.34 C
ATOM 8 O4' A A 682 68.305 68.805 39.161 1.00 65.91 O
ATOM 9 C3' A A 682 67.029 68.226 37.271 1.00 65.04 C
ATOM 10 O3' A A 682 67.059 68.210 35.842 1.00 65.68 O
ATOM 11 C2' A A 682 67.577 66.938 37.883 1.00 65.30 C
ATOM 12 O2' A A 682 68.735 66.436 37.240 1.00 64.40 O
ATOM 13 C1' A A 682 67.962 67.428 39.279 1.00 65.55 C
ATOM 14 N9 A A 682 66.819 67.318 40.185 1.00 65.06 N
ATOM 15 C8 A A 682 65.779 68.200 40.343 1.00 65.06 C
ATOM 16 N7 A A 682 64.871 67.795 41.194 1.00 65.62 N
ATOM 17 C5 A A 682 65.352 66.571 41.639 1.00 65.33 C
ATOM 18 C6 A A 682 64.844 65.629 42.561 1.00 65.31 C
ATOM 19 N6 A A 682 63.701 65.790 43.235 1.00 65.12 N
ATOM 20 N1 A A 682 65.565 64.509 42.774 1.00 65.47 N
ATOM 21 C2 A A 682 66.727 64.367 42.117 1.00 66.06 C
ATOM 22 N3 A A 682 67.310 65.187 41.238 1.00 64.95 N
ATOM 23 C4 A A 682 66.557 66.276 41.037 1.00 64.74 C
ATOM 24 P C A 683 65.680 68.194 34.991 1.00 65.56 P
ATOM 25 OP1 C A 683 66.032 67.701 33.642 1.00 66.14 O
ATOM 26 OP2 C A 683 64.944 69.479 35.121 1.00 65.28 O
ATOM 27 O5' C A 683 64.810 67.049 35.666 1.00 64.12 O
TER
ATOM 1 O3' U B 718 59.387 63.549 44.379 1.00 55.68 O
ATOM 2 P C B 719 60.764 62.859 44.826 1.00 57.43 P
ATOM 3 OP1 C B 719 61.777 63.258 43.833 1.00 58.22 O
ATOM 4 OP2 C B 719 60.460 61.424 45.029 1.00 58.52 O
ATOM 5 O5' C B 719 61.148 63.537 46.220 1.00 57.49 O
ATOM 6 C5' C B 719 61.611 64.910 46.293 1.00 56.22 C
ATOM 7 C4' C B 719 62.026 65.237 47.712 1.00 54.94 C
ATOM 8 O4' C B 719 60.868 65.231 48.592 1.00 53.27 O
ATOM 9 C3' C B 719 62.945 64.190 48.316 1.00 55.05 C
ATOM 10 O3' C B 719 64.280 64.404 47.911 1.00 57.05 O
ATOM 11 C2' C B 719 62.723 64.350 49.810 1.00 53.54 C
ATOM 12 O2' C B 719 63.466 65.415 50.365 1.00 53.49 O
ATOM 13 C1' C B 719 61.225 64.668 49.848 1.00 53.16 C
ATOM 14 N1 C B 719 60.371 63.487 50.104 1.00 51.64 N
ATOM 15 C2 C B 719 59.928 63.244 51.414 1.00 50.73 C
ATOM 16 O2 C B 719 60.245 64.030 52.316 1.00 49.63 O
ATOM 17 N3 C B 719 59.172 62.156 51.664 1.00 50.14 N
ATOM 18 C4 C B 719 58.856 61.321 50.672 1.00 51.34 C
ATOM 19 N4 C B 719 58.127 60.234 50.968 1.00 52.94 N
ATOM 20 C5 C B 719 59.276 61.550 49.330 1.00 51.91 C
ATOM 21 C6 C B 719 60.024 62.635 49.093 1.00 51.85 C
ATOM 22 P U B 720 65.303 63.175 47.902 1.00 59.57 P
ATOM 23 OP1 U B 720 66.626 63.671 47.447 1.00 60.16 O
ATOM 24 OP2 U B 720 64.655 62.044 47.187 1.00 59.45 O
ATOM 25 O5' U B 720 65.455 62.817 49.441 1.00 61.89 O
TER
Atoms:
OP1: (65.728,73.196,37.902)
OP2: (64.310,72.015,39.688)
C3': (67.029,68.226,37.271)
C1': (67.962,67.428,39.279)
C5': (67.482,70.719,37.903)
O4': (68.305,68.805,39.161)
C8: (65.779,68.200,40.343)
O2': (68.735,66.436,37.240)
C6: (64.844,65.629,42.561)
C5: (65.352,66.571,41.639)
C4: (66.557,66.276,41.037)
P: (65.634,72.247,39.062)
C4': (67.979,69.278,37.832)
C2': (67.577,66.938,37.883)
C2: (66.727,64.367,42.117)
N1: (65.565,64.509,42.774)
N3: (67.310,65.187,41.238)
N6: (63.701,65.790,43.235)
N7: (64.871,67.795,41.194)
N9: (66.819,67.318,40.185)
O5': (66.234,70.820,38.646)
O3': (67.059,68.210,35.842)
OP2: (64.310,72.015,39.688)
C3': (67.029,68.226,37.271)
C1': (67.962,67.428,39.279)
C5': (67.482,70.719,37.903)
O4': (68.305,68.805,39.161)
C8: (65.779,68.200,40.343)
O2': (68.735,66.436,37.240)
C6: (64.844,65.629,42.561)
C5: (65.352,66.571,41.639)
C4: (66.557,66.276,41.037)
P: (65.634,72.247,39.062)
C4': (67.979,69.278,37.832)
C2': (67.577,66.938,37.883)
C2: (66.727,64.367,42.117)
N1: (65.565,64.509,42.774)
N3: (67.310,65.187,41.238)
N6: (63.701,65.790,43.235)
N7: (64.871,67.795,41.194)
N9: (66.819,67.318,40.185)
O5': (66.234,70.820,38.646)
O3': (67.059,68.210,35.842)
C2: (59.928,63.244,51.414)
OP1: (61.777,63.258,43.833)
OP2: (60.460,61.424,45.029)
C4: (58.856,61.321,50.672)
O5': (61.148,63.537,46.220)
C3': (62.945,64.190,48.316)
C1': (61.225,64.668,49.848)
O4': (60.868,65.231,48.592)
C5': (61.611,64.910,46.293)
P: (60.764,62.859,44.826)
O2: (60.245,64.030,52.316)
C4': (62.026,65.237,47.712)
C2': (62.723,64.350,49.810)
O2': (63.466,65.415,50.365)
N1: (60.371,63.487,50.104)
N3: (59.172,62.156,51.664)
N4: (58.127,60.234,50.968)
C6: (60.024,62.635,49.093)
C5: (59.276,61.550,49.330)
O3': (64.280,64.404,47.911)
OP1: (61.777,63.258,43.833)
OP2: (60.460,61.424,45.029)
C4: (58.856,61.321,50.672)
O5': (61.148,63.537,46.220)
C3': (62.945,64.190,48.316)
C1': (61.225,64.668,49.848)
O4': (60.868,65.231,48.592)
C5': (61.611,64.910,46.293)
P: (60.764,62.859,44.826)
O2: (60.245,64.030,52.316)
C4': (62.026,65.237,47.712)
C2': (62.723,64.350,49.810)
O2': (63.466,65.415,50.365)
N1: (60.371,63.487,50.104)
N3: (59.172,62.156,51.664)
N4: (58.127,60.234,50.968)
C6: (60.024,62.635,49.093)
C5: (59.276,61.550,49.330)
O3': (64.280,64.404,47.911)
Image (generated by PyMOL):