ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G9C:R12:R13

Extra

PDB:
ATOM 1 O3' A A 11 7.782 -62.978 54.401 1.00 82.06 O
ATOM 2 P C A 12 8.844 -61.960 53.769 1.00 82.74 P
ATOM 3 OP1 C A 12 8.144 -60.674 53.550 1.00 82.89 O
ATOM 4 OP2 C A 12 9.538 -62.617 52.637 1.00 82.51 O
ATOM 5 O5' C A 12 9.881 -61.772 54.974 1.00 83.36 O
ATOM 6 C5' C A 12 9.428 -61.316 56.253 1.00 84.29 C
ATOM 7 C4' C A 12 10.375 -61.734 57.365 1.00 85.04 C
ATOM 8 O4' C A 12 10.403 -63.180 57.451 1.00 85.02 O
ATOM 9 C3' C A 12 11.823 -61.307 57.173 1.00 85.57 C
ATOM 10 O3' C A 12 12.023 -60.015 57.754 1.00 87.01 O
ATOM 11 C2' C A 12 12.612 -62.401 57.896 1.00 85.20 C
ATOM 12 O2' C A 12 12.917 -62.074 59.239 1.00 84.99 O
ATOM 13 C1' C A 12 11.685 -63.618 57.856 1.00 84.90 C
ATOM 14 N1 C A 12 12.159 -64.715 56.936 1.00 84.51 N
ATOM 15 C2 C A 12 13.032 -65.714 57.412 1.00 84.37 C
ATOM 16 O2 C A 12 13.418 -65.707 58.589 1.00 84.38 O
ATOM 17 N3 C A 12 13.441 -66.685 56.555 1.00 84.22 N
ATOM 18 C4 C A 12 13.023 -66.690 55.287 1.00 84.23 C
ATOM 19 N4 C A 12 13.458 -67.674 54.494 1.00 84.45 N
ATOM 20 C5 C A 12 12.137 -65.690 54.781 1.00 84.16 C
ATOM 21 C6 C A 12 11.739 -64.736 55.631 1.00 84.32 C
ATOM 22 P U A 13 12.247 -58.706 56.850 1.00 87.90 P
ATOM 23 OP1 U A 13 10.967 -58.367 56.190 1.00 87.99 O
ATOM 24 OP2 U A 13 13.459 -58.923 56.027 1.00 87.79 O
ATOM 25 O5' U A 13 12.550 -57.563 57.932 1.00 88.63 O
TER

ATOM 1 O3' C B 12 12.023 -60.015 57.754 1.00 87.01 O
ATOM 2 P U B 13 12.247 -58.706 56.850 1.00 87.90 P
ATOM 3 OP1 U B 13 10.967 -58.367 56.190 1.00 87.99 O
ATOM 4 OP2 U B 13 13.459 -58.923 56.027 1.00 87.79 O
ATOM 5 O5' U B 13 12.550 -57.563 57.932 1.00 88.63 O
ATOM 6 C5' U B 13 11.725 -57.403 59.092 1.00 89.71 C
ATOM 7 C4' U B 13 11.080 -56.026 59.157 1.00 90.49 C
ATOM 8 O4' U B 13 12.088 -54.999 58.964 1.00 90.78 O
ATOM 9 C3' U B 13 10.011 -55.751 58.105 1.00 90.90 C
ATOM 10 O3' U B 13 8.727 -56.154 58.584 1.00 91.32 O
ATOM 11 C2' U B 13 10.102 -54.236 57.927 1.00 91.08 C
ATOM 12 O2' U B 13 9.353 -53.508 58.886 1.00 90.99 O
ATOM 13 C1' U B 13 11.601 -53.974 58.111 1.00 91.12 C
ATOM 14 N1 U B 13 12.432 -53.928 56.834 1.00 91.33 N
ATOM 15 C2 U B 13 12.073 -53.107 55.767 1.00 91.34 C
ATOM 16 O2 U B 13 11.093 -52.380 55.749 1.00 91.22 O
ATOM 17 N3 U B 13 12.919 -53.165 54.681 1.00 91.42 N
ATOM 18 C4 U B 13 14.065 -53.933 54.546 1.00 91.36 C
ATOM 19 O4 U B 13 14.719 -53.875 53.509 1.00 91.29 O
ATOM 20 C5 U B 13 14.381 -54.754 55.688 1.00 91.34 C
ATOM 21 C6 U B 13 13.573 -54.716 56.758 1.00 91.35 C
ATOM 22 P C B 14 7.990 -57.456 58.005 1.00 91.60 P
ATOM 23 OP1 C B 14 8.704 -58.646 58.519 1.00 91.47 O
ATOM 24 OP2 C B 14 7.820 -57.289 56.541 1.00 91.51 O
ATOM 25 O5' C B 14 6.567 -57.391 58.742 1.00 91.50 O
TER

Atoms:
C2: (13.032,-65.714,57.412)
OP1: (8.144,-60.674,53.550)
OP2: (9.538,-62.617,52.637)
C4: (13.023,-66.690,55.287)
O5': (9.881,-61.772,54.974)
C3': (11.823,-61.307,57.173)
C1': (11.685,-63.618,57.856)
O4': (10.403,-63.180,57.451)
C5': (9.428,-61.316,56.253)
P: (8.844,-61.960,53.769)
O2: (13.418,-65.707,58.589)
C4': (10.375,-61.734,57.365)
C2': (12.612,-62.401,57.896)
O2': (12.917,-62.074,59.239)
N1: (12.159,-64.715,56.936)
N3: (13.441,-66.685,56.555)
N4: (13.458,-67.674,54.494)
C6: (11.739,-64.736,55.631)
C5: (12.137,-65.690,54.781)
O3': (12.023,-60.015,57.754)
C4: (14.065,-53.933,54.546)
N3: (12.919,-53.165,54.681)
OP1: (10.967,-58.367,56.190)
OP2: (13.459,-58.923,56.027)
C2: (12.073,-53.107,55.767)
C1': (11.601,-53.974,58.111)
C3': (10.011,-55.751,58.105)
O5': (12.550,-57.563,57.932)
O4': (12.088,-54.999,58.964)
C5': (11.725,-57.403,59.092)
P: (12.247,-58.706,56.850)
C4': (11.080,-56.026,59.157)
C2': (10.102,-54.236,57.927)
O2': (9.353,-53.508,58.886)
N1: (12.432,-53.928,56.834)
O4: (14.719,-53.875,53.509)
O2: (11.093,-52.380,55.749)
C6: (13.573,-54.716,56.758)
C5: (14.381,-54.754,55.688)
O3': (8.727,-56.154,58.584)
Image (generated by PyMOL):
PyMOL image
show in jmol