Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0234:0235
Extra
PDB:
ATOM 1 O3' C A 233 92.383 111.708 -9.729 1.00 63.84 O
ATOM 2 P G A 234 93.869 112.303 -9.811 1.00 64.30 P
ATOM 3 OP1 G A 234 94.146 112.638 -11.239 1.00 64.91 O
ATOM 4 OP2 G A 234 94.766 111.357 -9.084 1.00 63.06 O
ATOM 5 O5' G A 234 93.740 113.652 -8.979 1.00 63.89 O
ATOM 6 C5' G A 234 92.542 114.450 -9.078 1.00 64.21 C
ATOM 7 C4' G A 234 92.625 115.628 -8.146 1.00 64.37 C
ATOM 8 O4' G A 234 92.443 115.171 -6.779 1.00 65.08 O
ATOM 9 C3' G A 234 93.968 116.344 -8.182 1.00 64.28 C
ATOM 10 O3' G A 234 93.784 117.732 -7.963 1.00 63.54 O
ATOM 11 C2' G A 234 94.721 115.696 -7.029 1.00 64.44 C
ATOM 12 O2' G A 234 95.740 116.512 -6.490 1.00 63.29 O
ATOM 13 C1' G A 234 93.595 115.475 -6.024 1.00 65.24 C
ATOM 14 N9 G A 234 93.873 114.359 -5.128 1.00 65.43 N
ATOM 15 C8 G A 234 94.487 113.171 -5.444 1.00 65.88 C
ATOM 16 N7 G A 234 94.688 112.407 -4.406 1.00 66.57 N
ATOM 17 C5 G A 234 94.158 113.129 -3.342 1.00 66.38 C
ATOM 18 C6 G A 234 94.112 112.830 -1.952 1.00 66.08 C
ATOM 19 O6 G A 234 94.569 111.848 -1.355 1.00 65.87 O
ATOM 20 N1 G A 234 93.465 113.833 -1.238 1.00 66.35 N
ATOM 21 C2 G A 234 92.940 114.980 -1.781 1.00 65.77 C
ATOM 22 N2 G A 234 92.338 115.820 -0.927 1.00 65.49 N
ATOM 23 N3 G A 234 92.998 115.281 -3.064 1.00 65.75 N
ATOM 24 C4 G A 234 93.619 114.319 -3.780 1.00 66.07 C
ATOM 25 P A A 235 94.319 118.777 -9.058 1.00 62.67 P
ATOM 26 OP1 A A 235 93.916 118.261 -10.395 1.00 63.17 O
ATOM 27 OP2 A A 235 95.755 119.027 -8.764 1.00 61.57 O
ATOM 28 O5' A A 235 93.482 120.098 -8.776 1.00 60.95 O
TER
ATOM 1 O3' G B 234 93.784 117.732 -7.963 1.00 63.54 O
ATOM 2 P A B 235 94.319 118.777 -9.058 1.00 62.67 P
ATOM 3 OP1 A B 235 93.916 118.261 -10.395 1.00 63.17 O
ATOM 4 OP2 A B 235 95.755 119.027 -8.764 1.00 61.57 O
ATOM 5 O5' A B 235 93.482 120.098 -8.776 1.00 60.95 O
ATOM 6 C5' A B 235 92.083 120.172 -9.105 1.00 60.13 C
ATOM 7 C4' A B 235 91.468 121.351 -8.400 1.00 60.19 C
ATOM 8 O4' A B 235 91.360 121.062 -6.976 1.00 59.66 O
ATOM 9 C3' A B 235 92.324 122.608 -8.505 1.00 59.48 C
ATOM 10 O3' A B 235 91.485 123.741 -8.413 1.00 60.40 O
ATOM 11 C2' A B 235 93.186 122.512 -7.255 1.00 59.44 C
ATOM 12 O2' A B 235 93.731 123.748 -6.840 1.00 57.35 O
ATOM 13 C1' A B 235 92.166 121.972 -6.253 1.00 59.37 C
ATOM 14 N9 A B 235 92.768 121.269 -5.124 1.00 58.73 N
ATOM 15 C8 A B 235 93.518 120.115 -5.120 1.00 58.20 C
ATOM 16 N7 A B 235 93.945 119.768 -3.931 1.00 57.96 N
ATOM 17 C5 A B 235 93.437 120.756 -3.095 1.00 57.95 C
ATOM 18 C6 A B 235 93.545 120.975 -1.715 1.00 56.90 C
ATOM 19 N6 A B 235 94.233 120.184 -0.894 1.00 56.89 N
ATOM 20 N1 A B 235 92.919 122.054 -1.201 1.00 56.31 N
ATOM 21 C2 A B 235 92.235 122.855 -2.024 1.00 56.72 C
ATOM 22 N3 A B 235 92.063 122.760 -3.335 1.00 57.17 N
ATOM 23 C4 A B 235 92.700 121.678 -3.816 1.00 58.11 C
ATOM 24 P A B 236 90.936 124.418 -9.750 1.00 60.84 P
ATOM 25 OP1 A B 236 92.020 124.291 -10.761 1.00 60.74 O
ATOM 26 OP2 A B 236 90.385 125.759 -9.406 1.00 60.72 O
ATOM 27 O5' A B 236 89.712 123.497 -10.173 1.00 60.60 O
TER
ATOM 2 P G A 234 93.869 112.303 -9.811 1.00 64.30 P
ATOM 3 OP1 G A 234 94.146 112.638 -11.239 1.00 64.91 O
ATOM 4 OP2 G A 234 94.766 111.357 -9.084 1.00 63.06 O
ATOM 5 O5' G A 234 93.740 113.652 -8.979 1.00 63.89 O
ATOM 6 C5' G A 234 92.542 114.450 -9.078 1.00 64.21 C
ATOM 7 C4' G A 234 92.625 115.628 -8.146 1.00 64.37 C
ATOM 8 O4' G A 234 92.443 115.171 -6.779 1.00 65.08 O
ATOM 9 C3' G A 234 93.968 116.344 -8.182 1.00 64.28 C
ATOM 10 O3' G A 234 93.784 117.732 -7.963 1.00 63.54 O
ATOM 11 C2' G A 234 94.721 115.696 -7.029 1.00 64.44 C
ATOM 12 O2' G A 234 95.740 116.512 -6.490 1.00 63.29 O
ATOM 13 C1' G A 234 93.595 115.475 -6.024 1.00 65.24 C
ATOM 14 N9 G A 234 93.873 114.359 -5.128 1.00 65.43 N
ATOM 15 C8 G A 234 94.487 113.171 -5.444 1.00 65.88 C
ATOM 16 N7 G A 234 94.688 112.407 -4.406 1.00 66.57 N
ATOM 17 C5 G A 234 94.158 113.129 -3.342 1.00 66.38 C
ATOM 18 C6 G A 234 94.112 112.830 -1.952 1.00 66.08 C
ATOM 19 O6 G A 234 94.569 111.848 -1.355 1.00 65.87 O
ATOM 20 N1 G A 234 93.465 113.833 -1.238 1.00 66.35 N
ATOM 21 C2 G A 234 92.940 114.980 -1.781 1.00 65.77 C
ATOM 22 N2 G A 234 92.338 115.820 -0.927 1.00 65.49 N
ATOM 23 N3 G A 234 92.998 115.281 -3.064 1.00 65.75 N
ATOM 24 C4 G A 234 93.619 114.319 -3.780 1.00 66.07 C
ATOM 25 P A A 235 94.319 118.777 -9.058 1.00 62.67 P
ATOM 26 OP1 A A 235 93.916 118.261 -10.395 1.00 63.17 O
ATOM 27 OP2 A A 235 95.755 119.027 -8.764 1.00 61.57 O
ATOM 28 O5' A A 235 93.482 120.098 -8.776 1.00 60.95 O
TER
ATOM 1 O3' G B 234 93.784 117.732 -7.963 1.00 63.54 O
ATOM 2 P A B 235 94.319 118.777 -9.058 1.00 62.67 P
ATOM 3 OP1 A B 235 93.916 118.261 -10.395 1.00 63.17 O
ATOM 4 OP2 A B 235 95.755 119.027 -8.764 1.00 61.57 O
ATOM 5 O5' A B 235 93.482 120.098 -8.776 1.00 60.95 O
ATOM 6 C5' A B 235 92.083 120.172 -9.105 1.00 60.13 C
ATOM 7 C4' A B 235 91.468 121.351 -8.400 1.00 60.19 C
ATOM 8 O4' A B 235 91.360 121.062 -6.976 1.00 59.66 O
ATOM 9 C3' A B 235 92.324 122.608 -8.505 1.00 59.48 C
ATOM 10 O3' A B 235 91.485 123.741 -8.413 1.00 60.40 O
ATOM 11 C2' A B 235 93.186 122.512 -7.255 1.00 59.44 C
ATOM 12 O2' A B 235 93.731 123.748 -6.840 1.00 57.35 O
ATOM 13 C1' A B 235 92.166 121.972 -6.253 1.00 59.37 C
ATOM 14 N9 A B 235 92.768 121.269 -5.124 1.00 58.73 N
ATOM 15 C8 A B 235 93.518 120.115 -5.120 1.00 58.20 C
ATOM 16 N7 A B 235 93.945 119.768 -3.931 1.00 57.96 N
ATOM 17 C5 A B 235 93.437 120.756 -3.095 1.00 57.95 C
ATOM 18 C6 A B 235 93.545 120.975 -1.715 1.00 56.90 C
ATOM 19 N6 A B 235 94.233 120.184 -0.894 1.00 56.89 N
ATOM 20 N1 A B 235 92.919 122.054 -1.201 1.00 56.31 N
ATOM 21 C2 A B 235 92.235 122.855 -2.024 1.00 56.72 C
ATOM 22 N3 A B 235 92.063 122.760 -3.335 1.00 57.17 N
ATOM 23 C4 A B 235 92.700 121.678 -3.816 1.00 58.11 C
ATOM 24 P A B 236 90.936 124.418 -9.750 1.00 60.84 P
ATOM 25 OP1 A B 236 92.020 124.291 -10.761 1.00 60.74 O
ATOM 26 OP2 A B 236 90.385 125.759 -9.406 1.00 60.72 O
ATOM 27 O5' A B 236 89.712 123.497 -10.173 1.00 60.60 O
TER
Atoms:
OP1: (94.146,112.638,-11.239)
OP2: (94.766,111.357,-9.084)
C3': (93.968,116.344,-8.182)
C1': (93.595,115.475,-6.024)
C5': (92.542,114.450,-9.078)
O6: (94.569,111.848,-1.355)
O4': (92.443,115.171,-6.779)
C8: (94.487,113.171,-5.444)
C2: (92.940,114.980,-1.781)
C6: (94.112,112.830,-1.952)
C5: (94.158,113.129,-3.342)
C4: (93.619,114.319,-3.780)
P: (93.869,112.303,-9.811)
C4': (92.625,115.628,-8.146)
C2': (94.721,115.696,-7.029)
O2': (95.740,116.512,-6.490)
N1: (93.465,113.833,-1.238)
N2: (92.338,115.820,-0.927)
N3: (92.998,115.281,-3.064)
N7: (94.688,112.407,-4.406)
N9: (93.873,114.359,-5.128)
O5': (93.740,113.652,-8.979)
O3': (93.784,117.732,-7.963)
OP2: (94.766,111.357,-9.084)
C3': (93.968,116.344,-8.182)
C1': (93.595,115.475,-6.024)
C5': (92.542,114.450,-9.078)
O6: (94.569,111.848,-1.355)
O4': (92.443,115.171,-6.779)
C8: (94.487,113.171,-5.444)
C2: (92.940,114.980,-1.781)
C6: (94.112,112.830,-1.952)
C5: (94.158,113.129,-3.342)
C4: (93.619,114.319,-3.780)
P: (93.869,112.303,-9.811)
C4': (92.625,115.628,-8.146)
C2': (94.721,115.696,-7.029)
O2': (95.740,116.512,-6.490)
N1: (93.465,113.833,-1.238)
N2: (92.338,115.820,-0.927)
N3: (92.998,115.281,-3.064)
N7: (94.688,112.407,-4.406)
N9: (93.873,114.359,-5.128)
O5': (93.740,113.652,-8.979)
O3': (93.784,117.732,-7.963)
OP1: (93.916,118.261,-10.395)
OP2: (95.755,119.027,-8.764)
C3': (92.324,122.608,-8.505)
C1': (92.166,121.972,-6.253)
C5': (92.083,120.172,-9.105)
O4': (91.360,121.062,-6.976)
C8: (93.518,120.115,-5.120)
O2': (93.731,123.748,-6.840)
C6: (93.545,120.975,-1.715)
C5: (93.437,120.756,-3.095)
C4: (92.700,121.678,-3.816)
P: (94.319,118.777,-9.058)
C4': (91.468,121.351,-8.400)
C2': (93.186,122.512,-7.255)
C2: (92.235,122.855,-2.024)
N1: (92.919,122.054,-1.201)
N3: (92.063,122.760,-3.335)
N6: (94.233,120.184,-0.894)
N7: (93.945,119.768,-3.931)
N9: (92.768,121.269,-5.124)
O5': (93.482,120.098,-8.776)
O3': (91.485,123.741,-8.413)
OP2: (95.755,119.027,-8.764)
C3': (92.324,122.608,-8.505)
C1': (92.166,121.972,-6.253)
C5': (92.083,120.172,-9.105)
O4': (91.360,121.062,-6.976)
C8: (93.518,120.115,-5.120)
O2': (93.731,123.748,-6.840)
C6: (93.545,120.975,-1.715)
C5: (93.437,120.756,-3.095)
C4: (92.700,121.678,-3.816)
P: (94.319,118.777,-9.058)
C4': (91.468,121.351,-8.400)
C2': (93.186,122.512,-7.255)
C2: (92.235,122.855,-2.024)
N1: (92.919,122.054,-1.201)
N3: (92.063,122.760,-3.335)
N6: (94.233,120.184,-0.894)
N7: (93.945,119.768,-3.931)
N9: (92.768,121.269,-5.124)
O5': (93.482,120.098,-8.776)
O3': (91.485,123.741,-8.413)
Image (generated by PyMOL):