Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW6:A7:A19
Extra
PDB:
ATOM 1 O3' U A 6 -1.553 55.041 -14.501 1.00 8.05 O
ATOM 2 P A A 7 -0.689 53.698 -14.421 1.00 9.09 P
ATOM 3 OP1 A A 7 -1.276 52.823 -13.384 1.00 9.69 O
ATOM 4 OP2 A A 7 0.733 54.115 -14.343 1.00 10.01 O
ATOM 5 O5' A A 7 -0.984 53.036 -15.846 1.00 8.69 O
ATOM 6 C5' A A 7 -0.259 51.879 -16.254 1.00 9.28 C
ATOM 7 C4' A A 7 -1.176 50.850 -16.892 1.00 9.17 C
ATOM 8 O4' A A 7 -2.018 50.259 -15.869 1.00 8.97 O
ATOM 9 C3' A A 7 -2.126 51.373 -17.967 1.00 9.85 C
ATOM 10 C2' A A 7 -3.421 51.558 -17.190 1.00 8.99 C
ATOM 11 O2' A A 7 -4.571 51.521 -18.016 1.00 9.85 O
ATOM 12 C1' A A 7 -3.360 50.331 -16.286 1.00 8.58 C
ATOM 13 N9 A A 7 -4.196 50.451 -15.102 1.00 8.37 N
ATOM 14 C8 A A 7 -3.968 51.241 -14.011 1.00 8.57 C
ATOM 15 N7 A A 7 -4.902 51.155 -13.097 1.00 8.17 N
ATOM 16 C5 A A 7 -5.803 50.250 -13.631 1.00 8.39 C
ATOM 17 C6 A A 7 -7.016 49.731 -13.144 1.00 9.16 C
ATOM 18 N6 A A 7 -7.538 50.085 -11.964 1.00 9.64 N
ATOM 19 N1 A A 7 -7.669 48.844 -13.924 1.00 9.42 N
ATOM 20 C2 A A 7 -7.140 48.506 -15.105 1.00 9.67 C
ATOM 21 N3 A A 7 -6.008 48.925 -15.667 1.00 9.08 N
ATOM 22 C4 A A 7 -5.384 49.804 -14.868 1.00 8.45 C
ATOM 23 O3' A A 7 -2.319 50.397 -18.977 0.55 11.46 O
ATOM 24 P G A 8 -1.350 50.238 -20.237 1.00 11.44 P
ATOM 25 OP1 G A 8 0.043 50.519 -19.826 1.00 15.48 O
ATOM 26 OP2 G A 8 -1.961 50.939 -21.380 1.00 14.36 O
ATOM 27 O5' G A 8 -1.574 48.691 -20.602 1.00 14.95 O
TER
ATOM 1 O3' A B 18 -11.275 47.490 -10.794 1.00 9.47 O
ATOM 2 P C B 19 -11.508 49.060 -10.594 1.00 9.42 P
ATOM 3 OP1 C B 19 -12.862 49.367 -11.099 1.00 11.05 O
ATOM 4 OP2 C B 19 -10.343 49.791 -11.136 1.00 9.36 O
ATOM 5 O5' C B 19 -11.479 49.237 -9.006 1.00 9.49 O
ATOM 6 C5' C B 19 -12.387 48.522 -8.181 1.00 10.40 C
ATOM 7 C4' C B 19 -11.991 48.703 -6.730 1.00 11.39 C
ATOM 8 O4' C B 19 -10.600 48.329 -6.575 1.00 11.29 O
ATOM 9 C3' C B 19 -12.039 50.137 -6.225 1.00 11.42 C
ATOM 10 O3' C B 19 -13.353 50.495 -5.826 1.00 12.02 O
ATOM 11 C2' C B 19 -11.110 50.039 -5.025 1.00 12.01 C
ATOM 12 O2' C B 19 -11.734 49.385 -3.939 1.00 13.85 O
ATOM 13 C1' C B 19 -10.003 49.162 -5.600 1.00 11.13 C
ATOM 14 N1 C B 19 -8.897 49.948 -6.220 1.00 10.54 N
ATOM 15 C2 C B 19 -8.019 50.616 -5.367 1.00 11.58 C
ATOM 16 O2 C B 19 -8.204 50.525 -4.146 1.00 12.87 O
ATOM 17 N3 C B 19 -7.001 51.337 -5.899 1.00 11.56 N
ATOM 18 C4 C B 19 -6.847 51.399 -7.223 1.00 10.76 C
ATOM 19 N4 C B 19 -5.825 52.122 -7.697 1.00 10.76 N
ATOM 20 C5 C B 19 -7.733 50.721 -8.112 1.00 10.11 C
ATOM 21 C6 C B 19 -8.735 50.014 -7.576 1.00 9.90 C
ATOM 22 P C B 20 -13.979 51.897 -6.280 1.00 12.32 P
ATOM 23 OP1 C B 20 -15.378 51.909 -5.800 1.00 14.41 O
ATOM 24 OP2 C B 20 -13.686 52.110 -7.712 1.00 12.62 O
ATOM 25 O5' C B 20 -13.114 52.977 -5.484 1.00 12.19 O
TER
ATOM 2 P A A 7 -0.689 53.698 -14.421 1.00 9.09 P
ATOM 3 OP1 A A 7 -1.276 52.823 -13.384 1.00 9.69 O
ATOM 4 OP2 A A 7 0.733 54.115 -14.343 1.00 10.01 O
ATOM 5 O5' A A 7 -0.984 53.036 -15.846 1.00 8.69 O
ATOM 6 C5' A A 7 -0.259 51.879 -16.254 1.00 9.28 C
ATOM 7 C4' A A 7 -1.176 50.850 -16.892 1.00 9.17 C
ATOM 8 O4' A A 7 -2.018 50.259 -15.869 1.00 8.97 O
ATOM 9 C3' A A 7 -2.126 51.373 -17.967 1.00 9.85 C
ATOM 10 C2' A A 7 -3.421 51.558 -17.190 1.00 8.99 C
ATOM 11 O2' A A 7 -4.571 51.521 -18.016 1.00 9.85 O
ATOM 12 C1' A A 7 -3.360 50.331 -16.286 1.00 8.58 C
ATOM 13 N9 A A 7 -4.196 50.451 -15.102 1.00 8.37 N
ATOM 14 C8 A A 7 -3.968 51.241 -14.011 1.00 8.57 C
ATOM 15 N7 A A 7 -4.902 51.155 -13.097 1.00 8.17 N
ATOM 16 C5 A A 7 -5.803 50.250 -13.631 1.00 8.39 C
ATOM 17 C6 A A 7 -7.016 49.731 -13.144 1.00 9.16 C
ATOM 18 N6 A A 7 -7.538 50.085 -11.964 1.00 9.64 N
ATOM 19 N1 A A 7 -7.669 48.844 -13.924 1.00 9.42 N
ATOM 20 C2 A A 7 -7.140 48.506 -15.105 1.00 9.67 C
ATOM 21 N3 A A 7 -6.008 48.925 -15.667 1.00 9.08 N
ATOM 22 C4 A A 7 -5.384 49.804 -14.868 1.00 8.45 C
ATOM 23 O3' A A 7 -2.319 50.397 -18.977 0.55 11.46 O
ATOM 24 P G A 8 -1.350 50.238 -20.237 1.00 11.44 P
ATOM 25 OP1 G A 8 0.043 50.519 -19.826 1.00 15.48 O
ATOM 26 OP2 G A 8 -1.961 50.939 -21.380 1.00 14.36 O
ATOM 27 O5' G A 8 -1.574 48.691 -20.602 1.00 14.95 O
TER
ATOM 1 O3' A B 18 -11.275 47.490 -10.794 1.00 9.47 O
ATOM 2 P C B 19 -11.508 49.060 -10.594 1.00 9.42 P
ATOM 3 OP1 C B 19 -12.862 49.367 -11.099 1.00 11.05 O
ATOM 4 OP2 C B 19 -10.343 49.791 -11.136 1.00 9.36 O
ATOM 5 O5' C B 19 -11.479 49.237 -9.006 1.00 9.49 O
ATOM 6 C5' C B 19 -12.387 48.522 -8.181 1.00 10.40 C
ATOM 7 C4' C B 19 -11.991 48.703 -6.730 1.00 11.39 C
ATOM 8 O4' C B 19 -10.600 48.329 -6.575 1.00 11.29 O
ATOM 9 C3' C B 19 -12.039 50.137 -6.225 1.00 11.42 C
ATOM 10 O3' C B 19 -13.353 50.495 -5.826 1.00 12.02 O
ATOM 11 C2' C B 19 -11.110 50.039 -5.025 1.00 12.01 C
ATOM 12 O2' C B 19 -11.734 49.385 -3.939 1.00 13.85 O
ATOM 13 C1' C B 19 -10.003 49.162 -5.600 1.00 11.13 C
ATOM 14 N1 C B 19 -8.897 49.948 -6.220 1.00 10.54 N
ATOM 15 C2 C B 19 -8.019 50.616 -5.367 1.00 11.58 C
ATOM 16 O2 C B 19 -8.204 50.525 -4.146 1.00 12.87 O
ATOM 17 N3 C B 19 -7.001 51.337 -5.899 1.00 11.56 N
ATOM 18 C4 C B 19 -6.847 51.399 -7.223 1.00 10.76 C
ATOM 19 N4 C B 19 -5.825 52.122 -7.697 1.00 10.76 N
ATOM 20 C5 C B 19 -7.733 50.721 -8.112 1.00 10.11 C
ATOM 21 C6 C B 19 -8.735 50.014 -7.576 1.00 9.90 C
ATOM 22 P C B 20 -13.979 51.897 -6.280 1.00 12.32 P
ATOM 23 OP1 C B 20 -15.378 51.909 -5.800 1.00 14.41 O
ATOM 24 OP2 C B 20 -13.686 52.110 -7.712 1.00 12.62 O
ATOM 25 O5' C B 20 -13.114 52.977 -5.484 1.00 12.19 O
TER
Atoms:
OP1: (-1.276,52.823,-13.384)
OP2: (0.733,54.115,-14.343)
C3': (-2.126,51.373,-17.967)
C1': (-3.360,50.331,-16.286)
C5': (-0.259,51.879,-16.254)
O4': (-2.018,50.259,-15.869)
C8: (-3.968,51.241,-14.011)
O2': (-4.571,51.521,-18.016)
C6: (-7.016,49.731,-13.144)
C5: (-5.803,50.250,-13.631)
C4: (-5.384,49.804,-14.868)
P: (-0.689,53.698,-14.421)
C4': (-1.176,50.850,-16.892)
C2': (-3.421,51.558,-17.190)
C2: (-7.140,48.506,-15.105)
N1: (-7.669,48.844,-13.924)
N3: (-6.008,48.925,-15.667)
N6: (-7.538,50.085,-11.964)
N7: (-4.902,51.155,-13.097)
N9: (-4.196,50.451,-15.102)
O5': (-0.984,53.036,-15.846)
O3': (-2.319,50.397,-18.977)
OP2: (0.733,54.115,-14.343)
C3': (-2.126,51.373,-17.967)
C1': (-3.360,50.331,-16.286)
C5': (-0.259,51.879,-16.254)
O4': (-2.018,50.259,-15.869)
C8: (-3.968,51.241,-14.011)
O2': (-4.571,51.521,-18.016)
C6: (-7.016,49.731,-13.144)
C5: (-5.803,50.250,-13.631)
C4: (-5.384,49.804,-14.868)
P: (-0.689,53.698,-14.421)
C4': (-1.176,50.850,-16.892)
C2': (-3.421,51.558,-17.190)
C2: (-7.140,48.506,-15.105)
N1: (-7.669,48.844,-13.924)
N3: (-6.008,48.925,-15.667)
N6: (-7.538,50.085,-11.964)
N7: (-4.902,51.155,-13.097)
N9: (-4.196,50.451,-15.102)
O5': (-0.984,53.036,-15.846)
O3': (-2.319,50.397,-18.977)
C2: (-8.019,50.616,-5.367)
OP1: (-12.862,49.367,-11.099)
OP2: (-10.343,49.791,-11.136)
C4: (-6.847,51.399,-7.223)
O5': (-11.479,49.237,-9.006)
C3': (-12.039,50.137,-6.225)
C1': (-10.003,49.162,-5.600)
O4': (-10.600,48.329,-6.575)
C5': (-12.387,48.522,-8.181)
P: (-11.508,49.060,-10.594)
O2: (-8.204,50.525,-4.146)
C4': (-11.991,48.703,-6.730)
C2': (-11.110,50.039,-5.025)
O2': (-11.734,49.385,-3.939)
N1: (-8.897,49.948,-6.220)
N3: (-7.001,51.337,-5.899)
N4: (-5.825,52.122,-7.697)
C6: (-8.735,50.014,-7.576)
C5: (-7.733,50.721,-8.112)
O3': (-13.353,50.495,-5.826)
OP1: (-12.862,49.367,-11.099)
OP2: (-10.343,49.791,-11.136)
C4: (-6.847,51.399,-7.223)
O5': (-11.479,49.237,-9.006)
C3': (-12.039,50.137,-6.225)
C1': (-10.003,49.162,-5.600)
O4': (-10.600,48.329,-6.575)
C5': (-12.387,48.522,-8.181)
P: (-11.508,49.060,-10.594)
O2: (-8.204,50.525,-4.146)
C4': (-11.991,48.703,-6.730)
C2': (-11.110,50.039,-5.025)
O2': (-11.734,49.385,-3.939)
N1: (-8.897,49.948,-6.220)
N3: (-7.001,51.337,-5.899)
N4: (-5.825,52.122,-7.697)
C6: (-8.735,50.014,-7.576)
C5: (-7.733,50.721,-8.112)
O3': (-13.353,50.495,-5.826)
Image (generated by PyMOL):