Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.771 89.649 114.541 1.00 68.33 O
ATOM 2 P A A 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 3 OP1 A A 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 4 OP2 A A 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 5 O5' A A 575 -12.302 89.329 112.526 1.00 68.86 O
ATOM 6 C5' A A 575 -12.111 89.165 111.118 1.00 69.53 C
ATOM 7 C4' A A 575 -10.659 88.913 110.799 1.00 68.85 C
ATOM 8 O4' A A 575 -9.852 90.027 111.268 1.00 69.09 O
ATOM 9 C3' A A 575 -10.029 87.658 111.381 1.00 68.32 C
ATOM 10 O3' A A 575 -9.132 87.153 110.413 1.00 68.72 O
ATOM 11 C2' A A 575 -9.257 88.186 112.586 1.00 68.20 C
ATOM 12 O2' A A 575 -8.134 87.384 112.896 1.00 68.35 O
ATOM 13 C1' A A 575 -8.797 89.543 112.070 1.00 67.99 C
ATOM 14 N9 A A 575 -8.513 90.534 113.109 1.00 67.59 N
ATOM 15 C8 A A 575 -9.400 91.270 113.860 1.00 67.03 C
ATOM 16 N7 A A 575 -8.822 92.111 114.686 1.00 66.65 N
ATOM 17 C5 A A 575 -7.464 91.909 114.472 1.00 66.38 C
ATOM 18 C6 A A 575 -6.316 92.498 115.035 1.00 65.80 C
ATOM 19 N6 A A 575 -6.350 93.458 115.964 1.00 65.67 N
ATOM 20 N1 A A 575 -5.113 92.064 114.602 1.00 64.94 N
ATOM 21 C2 A A 575 -5.074 91.108 113.667 1.00 64.57 C
ATOM 22 N3 A A 575 -6.076 90.481 113.061 1.00 65.15 N
ATOM 23 C4 A A 575 -7.260 90.933 113.512 1.00 66.65 C
ATOM 24 P G A 576 -9.436 85.741 109.720 1.00 70.70 P
ATOM 25 OP1 G A 576 -10.914 85.579 109.673 1.00 70.82 O
ATOM 26 OP2 G A 576 -8.600 84.719 110.405 1.00 70.22 O
ATOM 27 O5' G A 576 -8.910 85.923 108.228 1.00 69.18 O
TER
ATOM 1 O3' A B 557 -2.268 95.722 117.349 1.00 53.99 O
ATOM 2 P C B 558 -3.135 95.406 118.662 1.00 56.21 P
ATOM 3 OP1 C B 558 -2.186 95.060 119.754 1.00 56.70 O
ATOM 4 OP2 C B 558 -4.213 94.449 118.291 1.00 54.90 O
ATOM 5 O5' C B 558 -3.785 96.813 119.015 1.00 56.26 O
ATOM 6 C5' C B 558 -2.952 97.950 119.264 1.00 60.20 C
ATOM 7 C4' C B 558 -3.797 99.161 119.551 1.00 64.38 C
ATOM 8 O4' C B 558 -4.576 99.496 118.374 1.00 64.94 O
ATOM 9 C3' C B 558 -4.844 98.986 120.635 1.00 66.53 C
ATOM 10 O3' C B 558 -4.296 99.113 121.939 1.00 70.54 O
ATOM 11 C2' C B 558 -5.826 100.093 120.295 1.00 65.56 C
ATOM 12 O2' C B 558 -5.338 101.364 120.683 1.00 64.44 O
ATOM 13 C1' C B 558 -5.845 99.996 118.769 1.00 64.53 C
ATOM 14 N1 C B 558 -6.875 99.064 118.274 1.00 64.49 N
ATOM 15 C2 C B 558 -8.157 99.553 117.989 1.00 65.14 C
ATOM 16 O2 C B 558 -8.398 100.764 118.155 1.00 66.39 O
ATOM 17 N3 C B 558 -9.102 98.694 117.543 1.00 64.55 N
ATOM 18 C4 C B 558 -8.810 97.400 117.385 1.00 63.63 C
ATOM 19 N4 C B 558 -9.778 96.587 116.959 1.00 64.44 N
ATOM 20 C5 C B 558 -7.516 96.881 117.662 1.00 63.37 C
ATOM 21 C6 C B 558 -6.589 97.738 118.099 1.00 63.88 C
ATOM 22 P C B 559 -4.848 98.175 123.118 1.00 72.54 P
ATOM 23 OP1 C B 559 -4.243 98.670 124.383 1.00 73.45 O
ATOM 24 OP2 C B 559 -4.676 96.746 122.730 1.00 70.72 O
ATOM 25 O5' C B 559 -6.405 98.499 123.141 1.00 72.37 O
TER
ATOM 2 P A A 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 3 OP1 A A 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 4 OP2 A A 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 5 O5' A A 575 -12.302 89.329 112.526 1.00 68.86 O
ATOM 6 C5' A A 575 -12.111 89.165 111.118 1.00 69.53 C
ATOM 7 C4' A A 575 -10.659 88.913 110.799 1.00 68.85 C
ATOM 8 O4' A A 575 -9.852 90.027 111.268 1.00 69.09 O
ATOM 9 C3' A A 575 -10.029 87.658 111.381 1.00 68.32 C
ATOM 10 O3' A A 575 -9.132 87.153 110.413 1.00 68.72 O
ATOM 11 C2' A A 575 -9.257 88.186 112.586 1.00 68.20 C
ATOM 12 O2' A A 575 -8.134 87.384 112.896 1.00 68.35 O
ATOM 13 C1' A A 575 -8.797 89.543 112.070 1.00 67.99 C
ATOM 14 N9 A A 575 -8.513 90.534 113.109 1.00 67.59 N
ATOM 15 C8 A A 575 -9.400 91.270 113.860 1.00 67.03 C
ATOM 16 N7 A A 575 -8.822 92.111 114.686 1.00 66.65 N
ATOM 17 C5 A A 575 -7.464 91.909 114.472 1.00 66.38 C
ATOM 18 C6 A A 575 -6.316 92.498 115.035 1.00 65.80 C
ATOM 19 N6 A A 575 -6.350 93.458 115.964 1.00 65.67 N
ATOM 20 N1 A A 575 -5.113 92.064 114.602 1.00 64.94 N
ATOM 21 C2 A A 575 -5.074 91.108 113.667 1.00 64.57 C
ATOM 22 N3 A A 575 -6.076 90.481 113.061 1.00 65.15 N
ATOM 23 C4 A A 575 -7.260 90.933 113.512 1.00 66.65 C
ATOM 24 P G A 576 -9.436 85.741 109.720 1.00 70.70 P
ATOM 25 OP1 G A 576 -10.914 85.579 109.673 1.00 70.82 O
ATOM 26 OP2 G A 576 -8.600 84.719 110.405 1.00 70.22 O
ATOM 27 O5' G A 576 -8.910 85.923 108.228 1.00 69.18 O
TER
ATOM 1 O3' A B 557 -2.268 95.722 117.349 1.00 53.99 O
ATOM 2 P C B 558 -3.135 95.406 118.662 1.00 56.21 P
ATOM 3 OP1 C B 558 -2.186 95.060 119.754 1.00 56.70 O
ATOM 4 OP2 C B 558 -4.213 94.449 118.291 1.00 54.90 O
ATOM 5 O5' C B 558 -3.785 96.813 119.015 1.00 56.26 O
ATOM 6 C5' C B 558 -2.952 97.950 119.264 1.00 60.20 C
ATOM 7 C4' C B 558 -3.797 99.161 119.551 1.00 64.38 C
ATOM 8 O4' C B 558 -4.576 99.496 118.374 1.00 64.94 O
ATOM 9 C3' C B 558 -4.844 98.986 120.635 1.00 66.53 C
ATOM 10 O3' C B 558 -4.296 99.113 121.939 1.00 70.54 O
ATOM 11 C2' C B 558 -5.826 100.093 120.295 1.00 65.56 C
ATOM 12 O2' C B 558 -5.338 101.364 120.683 1.00 64.44 O
ATOM 13 C1' C B 558 -5.845 99.996 118.769 1.00 64.53 C
ATOM 14 N1 C B 558 -6.875 99.064 118.274 1.00 64.49 N
ATOM 15 C2 C B 558 -8.157 99.553 117.989 1.00 65.14 C
ATOM 16 O2 C B 558 -8.398 100.764 118.155 1.00 66.39 O
ATOM 17 N3 C B 558 -9.102 98.694 117.543 1.00 64.55 N
ATOM 18 C4 C B 558 -8.810 97.400 117.385 1.00 63.63 C
ATOM 19 N4 C B 558 -9.778 96.587 116.959 1.00 64.44 N
ATOM 20 C5 C B 558 -7.516 96.881 117.662 1.00 63.37 C
ATOM 21 C6 C B 558 -6.589 97.738 118.099 1.00 63.88 C
ATOM 22 P C B 559 -4.848 98.175 123.118 1.00 72.54 P
ATOM 23 OP1 C B 559 -4.243 98.670 124.383 1.00 73.45 O
ATOM 24 OP2 C B 559 -4.676 96.746 122.730 1.00 70.72 O
ATOM 25 O5' C B 559 -6.405 98.499 123.141 1.00 72.37 O
TER
Atoms:
OP1: (-13.035,91.632,113.210)
OP2: (-14.697,89.927,112.238)
C3': (-10.029,87.658,111.381)
C1': (-8.797,89.543,112.070)
C5': (-12.111,89.165,111.118)
O4': (-9.852,90.027,111.268)
C8: (-9.400,91.270,113.860)
O2': (-8.134,87.384,112.896)
C6: (-6.316,92.498,115.035)
C5: (-7.464,91.909,114.472)
C4: (-7.260,90.933,113.512)
P: (-13.502,90.224,113.069)
C4': (-10.659,88.913,110.799)
C2': (-9.257,88.186,112.586)
C2: (-5.074,91.108,113.667)
N1: (-5.113,92.064,114.602)
N3: (-6.076,90.481,113.061)
N6: (-6.350,93.458,115.964)
N7: (-8.822,92.111,114.686)
N9: (-8.513,90.534,113.109)
O5': (-12.302,89.329,112.526)
O3': (-9.132,87.153,110.413)
OP2: (-14.697,89.927,112.238)
C3': (-10.029,87.658,111.381)
C1': (-8.797,89.543,112.070)
C5': (-12.111,89.165,111.118)
O4': (-9.852,90.027,111.268)
C8: (-9.400,91.270,113.860)
O2': (-8.134,87.384,112.896)
C6: (-6.316,92.498,115.035)
C5: (-7.464,91.909,114.472)
C4: (-7.260,90.933,113.512)
P: (-13.502,90.224,113.069)
C4': (-10.659,88.913,110.799)
C2': (-9.257,88.186,112.586)
C2: (-5.074,91.108,113.667)
N1: (-5.113,92.064,114.602)
N3: (-6.076,90.481,113.061)
N6: (-6.350,93.458,115.964)
N7: (-8.822,92.111,114.686)
N9: (-8.513,90.534,113.109)
O5': (-12.302,89.329,112.526)
O3': (-9.132,87.153,110.413)
C2: (-8.157,99.553,117.989)
OP1: (-2.186,95.060,119.754)
OP2: (-4.213,94.449,118.291)
C4: (-8.810,97.400,117.385)
O5': (-3.785,96.813,119.015)
C3': (-4.844,98.986,120.635)
C1': (-5.845,99.996,118.769)
O4': (-4.576,99.496,118.374)
C5': (-2.952,97.950,119.264)
P: (-3.135,95.406,118.662)
O2: (-8.398,100.764,118.155)
C4': (-3.797,99.161,119.551)
C2': (-5.826,100.093,120.295)
O2': (-5.338,101.364,120.683)
N1: (-6.875,99.064,118.274)
N3: (-9.102,98.694,117.543)
N4: (-9.778,96.587,116.959)
C6: (-6.589,97.738,118.099)
C5: (-7.516,96.881,117.662)
O3': (-4.296,99.113,121.939)
OP1: (-2.186,95.060,119.754)
OP2: (-4.213,94.449,118.291)
C4: (-8.810,97.400,117.385)
O5': (-3.785,96.813,119.015)
C3': (-4.844,98.986,120.635)
C1': (-5.845,99.996,118.769)
O4': (-4.576,99.496,118.374)
C5': (-2.952,97.950,119.264)
P: (-3.135,95.406,118.662)
O2: (-8.398,100.764,118.155)
C4': (-3.797,99.161,119.551)
C2': (-5.826,100.093,120.295)
O2': (-5.338,101.364,120.683)
N1: (-6.875,99.064,118.274)
N3: (-9.102,98.694,117.543)
N4: (-9.778,96.587,116.959)
C6: (-6.589,97.738,118.099)
C5: (-7.516,96.881,117.662)
O3': (-4.296,99.113,121.939)
Image (generated by PyMOL):