Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.373 103.034 106.192 1.00 53.36 O
ATOM 2 P G A 580 -6.317 103.540 104.668 1.00 52.48 P
ATOM 3 OP1 G A 580 -5.940 104.975 104.726 1.00 52.33 O
ATOM 4 OP2 G A 580 -7.561 103.133 103.966 1.00 53.91 O
ATOM 5 O5' G A 580 -5.127 102.696 104.026 1.00 52.34 O
ATOM 6 C5' G A 580 -3.755 102.909 104.428 1.00 48.34 C
ATOM 7 C4' G A 580 -2.851 101.922 103.728 1.00 46.84 C
ATOM 8 O4' G A 580 -3.168 100.577 104.168 1.00 45.89 O
ATOM 9 C3' G A 580 -2.996 101.866 102.216 1.00 45.54 C
ATOM 10 O3' G A 580 -2.182 102.844 101.592 1.00 46.74 O
ATOM 11 C2' G A 580 -2.477 100.470 101.891 1.00 45.07 C
ATOM 12 O2' G A 580 -1.073 100.390 101.831 1.00 45.30 O
ATOM 13 C1' G A 580 -2.974 99.668 103.096 1.00 45.21 C
ATOM 14 N9 G A 580 -4.242 99.015 102.809 1.00 45.33 N
ATOM 15 C8 G A 580 -5.505 99.510 103.041 1.00 45.93 C
ATOM 16 N7 G A 580 -6.449 98.714 102.622 1.00 46.22 N
ATOM 17 C5 G A 580 -5.771 97.626 102.095 1.00 44.37 C
ATOM 18 C6 G A 580 -6.263 96.456 101.487 1.00 44.38 C
ATOM 19 O6 G A 580 -7.436 96.133 101.281 1.00 49.36 O
ATOM 20 N1 G A 580 -5.233 95.611 101.097 1.00 44.79 N
ATOM 21 C2 G A 580 -3.896 95.860 101.275 1.00 44.64 C
ATOM 22 N2 G A 580 -3.056 94.906 100.851 1.00 42.92 N
ATOM 23 N3 G A 580 -3.421 96.960 101.835 1.00 44.67 N
ATOM 24 C4 G A 580 -4.408 97.792 102.217 1.00 44.42 C
ATOM 25 P A A 581 -2.804 104.253 101.141 1.00 47.60 P
ATOM 26 OP1 A A 581 -2.667 105.179 102.294 1.00 46.99 O
ATOM 27 OP2 A A 581 -4.136 104.055 100.519 1.00 48.53 O
ATOM 28 O5' A A 581 -1.802 104.727 99.996 1.00 50.21 O
TER
ATOM 1 O3' G B 580 -2.182 102.844 101.592 1.00 46.74 O
ATOM 2 P A B 581 -2.804 104.253 101.141 1.00 47.60 P
ATOM 3 OP1 A B 581 -2.667 105.179 102.294 1.00 46.99 O
ATOM 4 OP2 A B 581 -4.136 104.055 100.519 1.00 48.53 O
ATOM 5 O5' A B 581 -1.802 104.727 99.996 1.00 50.21 O
ATOM 6 C5' A B 581 -0.421 105.050 100.289 1.00 48.77 C
ATOM 7 C4' A B 581 0.455 104.774 99.082 1.00 49.59 C
ATOM 8 O4' A B 581 0.665 103.348 98.925 1.00 50.52 O
ATOM 9 C3' A B 581 -0.102 105.224 97.741 1.00 48.39 C
ATOM 10 O3' A B 581 0.138 106.606 97.520 1.00 44.58 O
ATOM 11 C2' A B 581 0.657 104.335 96.766 1.00 50.06 C
ATOM 12 O2' A B 581 1.973 104.792 96.538 1.00 50.59 O
ATOM 13 C1' A B 581 0.717 103.019 97.545 1.00 52.57 C
ATOM 14 N9 A B 581 -0.410 102.133 97.249 1.00 57.47 N
ATOM 15 C8 A B 581 -1.475 101.839 98.063 1.00 59.01 C
ATOM 16 N7 A B 581 -2.361 101.046 97.512 1.00 61.37 N
ATOM 17 C5 A B 581 -1.843 100.794 96.250 1.00 62.20 C
ATOM 18 C6 A B 581 -2.320 100.030 95.165 1.00 63.60 C
ATOM 19 N6 A B 581 -3.477 99.360 95.175 1.00 63.05 N
ATOM 20 N1 A B 581 -1.558 99.981 94.052 1.00 64.52 N
ATOM 21 C2 A B 581 -0.401 100.656 94.039 1.00 65.16 C
ATOM 22 N3 A B 581 0.151 101.411 94.991 1.00 64.18 N
ATOM 23 C4 A B 581 -0.632 101.442 96.081 1.00 60.93 C
ATOM 24 P C B 582 -0.925 107.476 96.691 1.00 44.18 P
ATOM 25 OP1 C B 582 -0.330 108.824 96.505 1.00 43.55 O
ATOM 26 OP2 C B 582 -2.243 107.350 97.348 1.00 46.37 O
ATOM 27 O5' C B 582 -1.016 106.741 95.280 1.00 42.10 O
TER
ATOM 2 P G A 580 -6.317 103.540 104.668 1.00 52.48 P
ATOM 3 OP1 G A 580 -5.940 104.975 104.726 1.00 52.33 O
ATOM 4 OP2 G A 580 -7.561 103.133 103.966 1.00 53.91 O
ATOM 5 O5' G A 580 -5.127 102.696 104.026 1.00 52.34 O
ATOM 6 C5' G A 580 -3.755 102.909 104.428 1.00 48.34 C
ATOM 7 C4' G A 580 -2.851 101.922 103.728 1.00 46.84 C
ATOM 8 O4' G A 580 -3.168 100.577 104.168 1.00 45.89 O
ATOM 9 C3' G A 580 -2.996 101.866 102.216 1.00 45.54 C
ATOM 10 O3' G A 580 -2.182 102.844 101.592 1.00 46.74 O
ATOM 11 C2' G A 580 -2.477 100.470 101.891 1.00 45.07 C
ATOM 12 O2' G A 580 -1.073 100.390 101.831 1.00 45.30 O
ATOM 13 C1' G A 580 -2.974 99.668 103.096 1.00 45.21 C
ATOM 14 N9 G A 580 -4.242 99.015 102.809 1.00 45.33 N
ATOM 15 C8 G A 580 -5.505 99.510 103.041 1.00 45.93 C
ATOM 16 N7 G A 580 -6.449 98.714 102.622 1.00 46.22 N
ATOM 17 C5 G A 580 -5.771 97.626 102.095 1.00 44.37 C
ATOM 18 C6 G A 580 -6.263 96.456 101.487 1.00 44.38 C
ATOM 19 O6 G A 580 -7.436 96.133 101.281 1.00 49.36 O
ATOM 20 N1 G A 580 -5.233 95.611 101.097 1.00 44.79 N
ATOM 21 C2 G A 580 -3.896 95.860 101.275 1.00 44.64 C
ATOM 22 N2 G A 580 -3.056 94.906 100.851 1.00 42.92 N
ATOM 23 N3 G A 580 -3.421 96.960 101.835 1.00 44.67 N
ATOM 24 C4 G A 580 -4.408 97.792 102.217 1.00 44.42 C
ATOM 25 P A A 581 -2.804 104.253 101.141 1.00 47.60 P
ATOM 26 OP1 A A 581 -2.667 105.179 102.294 1.00 46.99 O
ATOM 27 OP2 A A 581 -4.136 104.055 100.519 1.00 48.53 O
ATOM 28 O5' A A 581 -1.802 104.727 99.996 1.00 50.21 O
TER
ATOM 1 O3' G B 580 -2.182 102.844 101.592 1.00 46.74 O
ATOM 2 P A B 581 -2.804 104.253 101.141 1.00 47.60 P
ATOM 3 OP1 A B 581 -2.667 105.179 102.294 1.00 46.99 O
ATOM 4 OP2 A B 581 -4.136 104.055 100.519 1.00 48.53 O
ATOM 5 O5' A B 581 -1.802 104.727 99.996 1.00 50.21 O
ATOM 6 C5' A B 581 -0.421 105.050 100.289 1.00 48.77 C
ATOM 7 C4' A B 581 0.455 104.774 99.082 1.00 49.59 C
ATOM 8 O4' A B 581 0.665 103.348 98.925 1.00 50.52 O
ATOM 9 C3' A B 581 -0.102 105.224 97.741 1.00 48.39 C
ATOM 10 O3' A B 581 0.138 106.606 97.520 1.00 44.58 O
ATOM 11 C2' A B 581 0.657 104.335 96.766 1.00 50.06 C
ATOM 12 O2' A B 581 1.973 104.792 96.538 1.00 50.59 O
ATOM 13 C1' A B 581 0.717 103.019 97.545 1.00 52.57 C
ATOM 14 N9 A B 581 -0.410 102.133 97.249 1.00 57.47 N
ATOM 15 C8 A B 581 -1.475 101.839 98.063 1.00 59.01 C
ATOM 16 N7 A B 581 -2.361 101.046 97.512 1.00 61.37 N
ATOM 17 C5 A B 581 -1.843 100.794 96.250 1.00 62.20 C
ATOM 18 C6 A B 581 -2.320 100.030 95.165 1.00 63.60 C
ATOM 19 N6 A B 581 -3.477 99.360 95.175 1.00 63.05 N
ATOM 20 N1 A B 581 -1.558 99.981 94.052 1.00 64.52 N
ATOM 21 C2 A B 581 -0.401 100.656 94.039 1.00 65.16 C
ATOM 22 N3 A B 581 0.151 101.411 94.991 1.00 64.18 N
ATOM 23 C4 A B 581 -0.632 101.442 96.081 1.00 60.93 C
ATOM 24 P C B 582 -0.925 107.476 96.691 1.00 44.18 P
ATOM 25 OP1 C B 582 -0.330 108.824 96.505 1.00 43.55 O
ATOM 26 OP2 C B 582 -2.243 107.350 97.348 1.00 46.37 O
ATOM 27 O5' C B 582 -1.016 106.741 95.280 1.00 42.10 O
TER
Atoms:
OP1: (-5.940,104.975,104.726)
OP2: (-7.561,103.133,103.966)
C3': (-2.996,101.866,102.216)
C1': (-2.974,99.668,103.096)
C5': (-3.755,102.909,104.428)
O6: (-7.436,96.133,101.281)
O4': (-3.168,100.577,104.168)
C8: (-5.505,99.510,103.041)
C2: (-3.896,95.860,101.275)
C6: (-6.263,96.456,101.487)
C5: (-5.771,97.626,102.095)
C4: (-4.408,97.792,102.217)
P: (-6.317,103.540,104.668)
C4': (-2.851,101.922,103.728)
C2': (-2.477,100.470,101.891)
O2': (-1.073,100.390,101.831)
N1: (-5.233,95.611,101.097)
N2: (-3.056,94.906,100.851)
N3: (-3.421,96.960,101.835)
N7: (-6.449,98.714,102.622)
N9: (-4.242,99.015,102.809)
O5': (-5.127,102.696,104.026)
O3': (-2.182,102.844,101.592)
OP2: (-7.561,103.133,103.966)
C3': (-2.996,101.866,102.216)
C1': (-2.974,99.668,103.096)
C5': (-3.755,102.909,104.428)
O6: (-7.436,96.133,101.281)
O4': (-3.168,100.577,104.168)
C8: (-5.505,99.510,103.041)
C2: (-3.896,95.860,101.275)
C6: (-6.263,96.456,101.487)
C5: (-5.771,97.626,102.095)
C4: (-4.408,97.792,102.217)
P: (-6.317,103.540,104.668)
C4': (-2.851,101.922,103.728)
C2': (-2.477,100.470,101.891)
O2': (-1.073,100.390,101.831)
N1: (-5.233,95.611,101.097)
N2: (-3.056,94.906,100.851)
N3: (-3.421,96.960,101.835)
N7: (-6.449,98.714,102.622)
N9: (-4.242,99.015,102.809)
O5': (-5.127,102.696,104.026)
O3': (-2.182,102.844,101.592)
OP1: (-2.667,105.179,102.294)
OP2: (-4.136,104.055,100.519)
C3': (-0.102,105.224,97.741)
C1': (0.717,103.019,97.545)
C5': (-0.421,105.050,100.289)
O4': (0.665,103.348,98.925)
C8: (-1.475,101.839,98.063)
O2': (1.973,104.792,96.538)
C6: (-2.320,100.030,95.165)
C5: (-1.843,100.794,96.250)
C4: (-0.632,101.442,96.081)
P: (-2.804,104.253,101.141)
C4': (0.455,104.774,99.082)
C2': (0.657,104.335,96.766)
C2: (-0.401,100.656,94.039)
N1: (-1.558,99.981,94.052)
N3: (0.151,101.411,94.991)
N6: (-3.477,99.360,95.175)
N7: (-2.361,101.046,97.512)
N9: (-0.410,102.133,97.249)
O5': (-1.802,104.727,99.996)
O3': (0.138,106.606,97.520)
OP2: (-4.136,104.055,100.519)
C3': (-0.102,105.224,97.741)
C1': (0.717,103.019,97.545)
C5': (-0.421,105.050,100.289)
O4': (0.665,103.348,98.925)
C8: (-1.475,101.839,98.063)
O2': (1.973,104.792,96.538)
C6: (-2.320,100.030,95.165)
C5: (-1.843,100.794,96.250)
C4: (-0.632,101.442,96.081)
P: (-2.804,104.253,101.141)
C4': (0.455,104.774,99.082)
C2': (0.657,104.335,96.766)
C2: (-0.401,100.656,94.039)
N1: (-1.558,99.981,94.052)
N3: (0.151,101.411,94.991)
N6: (-3.477,99.360,95.175)
N7: (-2.361,101.046,97.512)
N9: (-0.410,102.133,97.249)
O5': (-1.802,104.727,99.996)
O3': (0.138,106.606,97.520)
Image (generated by PyMOL):