Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A580:A581
Extra
PDB:
ATOM 1 O3' A A 579 -6.014 103.705 106.685 1.00 60.28 O
ATOM 2 P G A 580 -5.874 104.200 105.154 1.00 59.98 P
ATOM 3 OP1 G A 580 -5.417 105.615 105.095 1.00 57.70 O
ATOM 4 OP2 G A 580 -7.104 103.797 104.434 1.00 60.03 O
ATOM 5 O5' G A 580 -4.698 103.305 104.576 1.00 59.79 O
ATOM 6 C5' G A 580 -3.336 103.506 104.980 1.00 57.77 C
ATOM 7 C4' G A 580 -2.464 102.487 104.300 1.00 56.12 C
ATOM 8 O4' G A 580 -2.879 101.150 104.697 1.00 57.22 O
ATOM 9 C3' G A 580 -2.613 102.471 102.791 1.00 55.88 C
ATOM 10 O3' G A 580 -1.761 103.429 102.189 1.00 54.42 O
ATOM 11 C2' G A 580 -2.129 101.075 102.445 1.00 56.41 C
ATOM 12 O2' G A 580 -0.719 101.058 102.472 1.00 58.39 O
ATOM 13 C1' G A 580 -2.696 100.253 103.608 1.00 57.07 C
ATOM 14 N9 G A 580 -3.971 99.598 103.296 1.00 58.23 N
ATOM 15 C8 G A 580 -5.237 100.101 103.514 1.00 59.70 C
ATOM 16 N7 G A 580 -6.190 99.300 103.106 1.00 60.15 N
ATOM 17 C5 G A 580 -5.520 98.196 102.591 1.00 58.91 C
ATOM 18 C6 G A 580 -6.026 96.997 102.002 1.00 59.23 C
ATOM 19 O6 G A 580 -7.209 96.652 101.823 1.00 61.06 O
ATOM 20 N1 G A 580 -4.995 96.151 101.610 1.00 57.90 N
ATOM 21 C2 G A 580 -3.659 96.404 101.770 1.00 57.65 C
ATOM 22 N2 G A 580 -2.833 95.459 101.320 1.00 56.57 N
ATOM 23 N3 G A 580 -3.170 97.502 102.327 1.00 58.27 N
ATOM 24 C4 G A 580 -4.149 98.355 102.707 1.00 58.45 C
ATOM 25 P A A 581 -2.365 104.794 101.611 1.00 55.40 P
ATOM 26 OP1 A A 581 -2.220 105.830 102.662 1.00 53.68 O
ATOM 27 OP2 A A 581 -3.683 104.574 100.978 1.00 55.59 O
ATOM 28 O5' A A 581 -1.355 105.159 100.448 1.00 55.63 O
TER
ATOM 1 O3' G B 580 -1.761 103.429 102.189 1.00 54.42 O
ATOM 2 P A B 581 -2.365 104.794 101.611 1.00 55.40 P
ATOM 3 OP1 A B 581 -2.220 105.830 102.662 1.00 53.68 O
ATOM 4 OP2 A B 581 -3.683 104.574 100.978 1.00 55.59 O
ATOM 5 O5' A B 581 -1.355 105.159 100.448 1.00 55.63 O
ATOM 6 C5' A B 581 -0.055 105.690 100.730 1.00 55.28 C
ATOM 7 C4' A B 581 0.853 105.360 99.590 1.00 55.77 C
ATOM 8 O4' A B 581 0.901 103.916 99.469 1.00 58.58 O
ATOM 9 C3' A B 581 0.303 105.803 98.249 1.00 55.28 C
ATOM 10 O3' A B 581 0.600 107.167 97.974 1.00 50.95 O
ATOM 11 C2' A B 581 0.993 104.848 97.292 1.00 58.18 C
ATOM 12 O2' A B 581 2.319 105.247 97.073 1.00 60.04 O
ATOM 13 C1' A B 581 1.005 103.551 98.105 1.00 60.71 C
ATOM 14 N9 A B 581 -0.095 102.644 97.789 1.00 64.78 N
ATOM 15 C8 A B 581 -1.151 102.320 98.594 1.00 66.61 C
ATOM 16 N7 A B 581 -2.036 101.541 98.020 1.00 69.51 N
ATOM 17 C5 A B 581 -1.519 101.327 96.753 1.00 69.48 C
ATOM 18 C6 A B 581 -2.007 100.614 95.648 1.00 70.78 C
ATOM 19 N6 A B 581 -3.194 100.008 95.630 1.00 71.68 N
ATOM 20 N1 A B 581 -1.236 100.565 94.543 1.00 71.96 N
ATOM 21 C2 A B 581 -0.072 101.229 94.548 1.00 71.90 C
ATOM 22 N3 A B 581 0.479 101.967 95.515 1.00 69.89 N
ATOM 23 C4 A B 581 -0.305 101.973 96.607 1.00 67.93 C
ATOM 24 P C B 582 -0.478 108.058 97.194 1.00 50.05 P
ATOM 25 OP1 C B 582 0.066 109.421 96.971 1.00 48.69 O
ATOM 26 OP2 C B 582 -1.734 107.901 97.959 1.00 49.82 O
ATOM 27 O5' C B 582 -0.620 107.321 95.783 1.00 48.64 O
TER
ATOM 2 P G A 580 -5.874 104.200 105.154 1.00 59.98 P
ATOM 3 OP1 G A 580 -5.417 105.615 105.095 1.00 57.70 O
ATOM 4 OP2 G A 580 -7.104 103.797 104.434 1.00 60.03 O
ATOM 5 O5' G A 580 -4.698 103.305 104.576 1.00 59.79 O
ATOM 6 C5' G A 580 -3.336 103.506 104.980 1.00 57.77 C
ATOM 7 C4' G A 580 -2.464 102.487 104.300 1.00 56.12 C
ATOM 8 O4' G A 580 -2.879 101.150 104.697 1.00 57.22 O
ATOM 9 C3' G A 580 -2.613 102.471 102.791 1.00 55.88 C
ATOM 10 O3' G A 580 -1.761 103.429 102.189 1.00 54.42 O
ATOM 11 C2' G A 580 -2.129 101.075 102.445 1.00 56.41 C
ATOM 12 O2' G A 580 -0.719 101.058 102.472 1.00 58.39 O
ATOM 13 C1' G A 580 -2.696 100.253 103.608 1.00 57.07 C
ATOM 14 N9 G A 580 -3.971 99.598 103.296 1.00 58.23 N
ATOM 15 C8 G A 580 -5.237 100.101 103.514 1.00 59.70 C
ATOM 16 N7 G A 580 -6.190 99.300 103.106 1.00 60.15 N
ATOM 17 C5 G A 580 -5.520 98.196 102.591 1.00 58.91 C
ATOM 18 C6 G A 580 -6.026 96.997 102.002 1.00 59.23 C
ATOM 19 O6 G A 580 -7.209 96.652 101.823 1.00 61.06 O
ATOM 20 N1 G A 580 -4.995 96.151 101.610 1.00 57.90 N
ATOM 21 C2 G A 580 -3.659 96.404 101.770 1.00 57.65 C
ATOM 22 N2 G A 580 -2.833 95.459 101.320 1.00 56.57 N
ATOM 23 N3 G A 580 -3.170 97.502 102.327 1.00 58.27 N
ATOM 24 C4 G A 580 -4.149 98.355 102.707 1.00 58.45 C
ATOM 25 P A A 581 -2.365 104.794 101.611 1.00 55.40 P
ATOM 26 OP1 A A 581 -2.220 105.830 102.662 1.00 53.68 O
ATOM 27 OP2 A A 581 -3.683 104.574 100.978 1.00 55.59 O
ATOM 28 O5' A A 581 -1.355 105.159 100.448 1.00 55.63 O
TER
ATOM 1 O3' G B 580 -1.761 103.429 102.189 1.00 54.42 O
ATOM 2 P A B 581 -2.365 104.794 101.611 1.00 55.40 P
ATOM 3 OP1 A B 581 -2.220 105.830 102.662 1.00 53.68 O
ATOM 4 OP2 A B 581 -3.683 104.574 100.978 1.00 55.59 O
ATOM 5 O5' A B 581 -1.355 105.159 100.448 1.00 55.63 O
ATOM 6 C5' A B 581 -0.055 105.690 100.730 1.00 55.28 C
ATOM 7 C4' A B 581 0.853 105.360 99.590 1.00 55.77 C
ATOM 8 O4' A B 581 0.901 103.916 99.469 1.00 58.58 O
ATOM 9 C3' A B 581 0.303 105.803 98.249 1.00 55.28 C
ATOM 10 O3' A B 581 0.600 107.167 97.974 1.00 50.95 O
ATOM 11 C2' A B 581 0.993 104.848 97.292 1.00 58.18 C
ATOM 12 O2' A B 581 2.319 105.247 97.073 1.00 60.04 O
ATOM 13 C1' A B 581 1.005 103.551 98.105 1.00 60.71 C
ATOM 14 N9 A B 581 -0.095 102.644 97.789 1.00 64.78 N
ATOM 15 C8 A B 581 -1.151 102.320 98.594 1.00 66.61 C
ATOM 16 N7 A B 581 -2.036 101.541 98.020 1.00 69.51 N
ATOM 17 C5 A B 581 -1.519 101.327 96.753 1.00 69.48 C
ATOM 18 C6 A B 581 -2.007 100.614 95.648 1.00 70.78 C
ATOM 19 N6 A B 581 -3.194 100.008 95.630 1.00 71.68 N
ATOM 20 N1 A B 581 -1.236 100.565 94.543 1.00 71.96 N
ATOM 21 C2 A B 581 -0.072 101.229 94.548 1.00 71.90 C
ATOM 22 N3 A B 581 0.479 101.967 95.515 1.00 69.89 N
ATOM 23 C4 A B 581 -0.305 101.973 96.607 1.00 67.93 C
ATOM 24 P C B 582 -0.478 108.058 97.194 1.00 50.05 P
ATOM 25 OP1 C B 582 0.066 109.421 96.971 1.00 48.69 O
ATOM 26 OP2 C B 582 -1.734 107.901 97.959 1.00 49.82 O
ATOM 27 O5' C B 582 -0.620 107.321 95.783 1.00 48.64 O
TER
Atoms:
OP1: (-5.417,105.615,105.095)
OP2: (-7.104,103.797,104.434)
C3': (-2.613,102.471,102.791)
C1': (-2.696,100.253,103.608)
C5': (-3.336,103.506,104.980)
O6: (-7.209,96.652,101.823)
O4': (-2.879,101.150,104.697)
C8: (-5.237,100.101,103.514)
C2: (-3.659,96.404,101.770)
C6: (-6.026,96.997,102.002)
C5: (-5.520,98.196,102.591)
C4: (-4.149,98.355,102.707)
P: (-5.874,104.200,105.154)
C4': (-2.464,102.487,104.300)
C2': (-2.129,101.075,102.445)
O2': (-0.719,101.058,102.472)
N1: (-4.995,96.151,101.610)
N2: (-2.833,95.459,101.320)
N3: (-3.170,97.502,102.327)
N7: (-6.190,99.300,103.106)
N9: (-3.971,99.598,103.296)
O5': (-4.698,103.305,104.576)
O3': (-1.761,103.429,102.189)
OP2: (-7.104,103.797,104.434)
C3': (-2.613,102.471,102.791)
C1': (-2.696,100.253,103.608)
C5': (-3.336,103.506,104.980)
O6: (-7.209,96.652,101.823)
O4': (-2.879,101.150,104.697)
C8: (-5.237,100.101,103.514)
C2: (-3.659,96.404,101.770)
C6: (-6.026,96.997,102.002)
C5: (-5.520,98.196,102.591)
C4: (-4.149,98.355,102.707)
P: (-5.874,104.200,105.154)
C4': (-2.464,102.487,104.300)
C2': (-2.129,101.075,102.445)
O2': (-0.719,101.058,102.472)
N1: (-4.995,96.151,101.610)
N2: (-2.833,95.459,101.320)
N3: (-3.170,97.502,102.327)
N7: (-6.190,99.300,103.106)
N9: (-3.971,99.598,103.296)
O5': (-4.698,103.305,104.576)
O3': (-1.761,103.429,102.189)
OP1: (-2.220,105.830,102.662)
OP2: (-3.683,104.574,100.978)
C3': (0.303,105.803,98.249)
C1': (1.005,103.551,98.105)
C5': (-0.055,105.690,100.730)
O4': (0.901,103.916,99.469)
C8: (-1.151,102.320,98.594)
O2': (2.319,105.247,97.073)
C6: (-2.007,100.614,95.648)
C5: (-1.519,101.327,96.753)
C4: (-0.305,101.973,96.607)
P: (-2.365,104.794,101.611)
C4': (0.853,105.360,99.590)
C2': (0.993,104.848,97.292)
C2: (-0.072,101.229,94.548)
N1: (-1.236,100.565,94.543)
N3: (0.479,101.967,95.515)
N6: (-3.194,100.008,95.630)
N7: (-2.036,101.541,98.020)
N9: (-0.095,102.644,97.789)
O5': (-1.355,105.159,100.448)
O3': (0.600,107.167,97.974)
OP2: (-3.683,104.574,100.978)
C3': (0.303,105.803,98.249)
C1': (1.005,103.551,98.105)
C5': (-0.055,105.690,100.730)
O4': (0.901,103.916,99.469)
C8: (-1.151,102.320,98.594)
O2': (2.319,105.247,97.073)
C6: (-2.007,100.614,95.648)
C5: (-1.519,101.327,96.753)
C4: (-0.305,101.973,96.607)
P: (-2.365,104.794,101.611)
C4': (0.853,105.360,99.590)
C2': (0.993,104.848,97.292)
C2: (-0.072,101.229,94.548)
N1: (-1.236,100.565,94.543)
N3: (0.479,101.967,95.515)
N6: (-3.194,100.008,95.630)
N7: (-2.036,101.541,98.020)
N9: (-0.095,102.644,97.789)
O5': (-1.355,105.159,100.448)
O3': (0.600,107.167,97.974)
Image (generated by PyMOL):