Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q81:A580:A581
Extra
PDB:
ATOM 1 O3' A A 579 -6.171 103.189 106.682 1.00 70.99 O
ATOM 2 P G A 580 -6.037 103.719 105.171 1.00 72.00 P
ATOM 3 OP1 G A 580 -5.531 105.121 105.263 1.00 71.17 O
ATOM 4 OP2 G A 580 -7.293 103.431 104.424 1.00 71.67 O
ATOM 5 O5' G A 580 -4.910 102.795 104.529 1.00 71.76 O
ATOM 6 C5' G A 580 -3.515 103.023 104.799 1.00 70.34 C
ATOM 7 C4' G A 580 -2.669 102.006 104.066 1.00 70.26 C
ATOM 8 O4' G A 580 -3.023 100.670 104.513 1.00 70.70 O
ATOM 9 C3' G A 580 -2.851 101.947 102.560 1.00 69.65 C
ATOM 10 O3' G A 580 -2.034 102.903 101.913 1.00 69.12 O
ATOM 11 C2' G A 580 -2.364 100.541 102.233 1.00 69.76 C
ATOM 12 O2' G A 580 -0.957 100.440 102.194 1.00 70.14 O
ATOM 13 C1' G A 580 -2.871 99.755 103.443 1.00 70.10 C
ATOM 14 N9 G A 580 -4.158 99.127 103.187 1.00 70.87 N
ATOM 15 C8 G A 580 -5.402 99.631 103.475 1.00 72.22 C
ATOM 16 N7 G A 580 -6.372 98.843 103.097 1.00 73.63 N
ATOM 17 C5 G A 580 -5.728 97.752 102.529 1.00 72.20 C
ATOM 18 C6 G A 580 -6.256 96.575 101.945 1.00 72.52 C
ATOM 19 O6 G A 580 -7.446 96.238 101.816 1.00 72.95 O
ATOM 20 N1 G A 580 -5.240 95.740 101.489 1.00 72.54 N
ATOM 21 C2 G A 580 -3.895 95.999 101.587 1.00 71.62 C
ATOM 22 N2 G A 580 -3.075 95.070 101.071 1.00 72.41 N
ATOM 23 N3 G A 580 -3.394 97.084 102.141 1.00 70.64 N
ATOM 24 C4 G A 580 -4.359 97.911 102.584 1.00 71.09 C
ATOM 25 P A A 581 -2.651 104.313 101.477 1.00 69.94 P
ATOM 26 OP1 A A 581 -2.495 105.234 102.640 1.00 68.58 O
ATOM 27 OP2 A A 581 -3.992 104.106 100.872 1.00 69.87 O
ATOM 28 O5' A A 581 -1.670 104.805 100.324 1.00 71.03 O
TER
ATOM 1 O3' G B 580 -2.034 102.903 101.913 1.00 69.12 O
ATOM 2 P A B 581 -2.651 104.313 101.477 1.00 69.94 P
ATOM 3 OP1 A B 581 -2.495 105.234 102.640 1.00 68.58 O
ATOM 4 OP2 A B 581 -3.992 104.106 100.872 1.00 69.87 O
ATOM 5 O5' A B 581 -1.670 104.805 100.324 1.00 71.03 O
ATOM 6 C5' A B 581 -0.314 105.221 100.616 1.00 70.29 C
ATOM 7 C4' A B 581 0.589 104.918 99.442 1.00 69.38 C
ATOM 8 O4' A B 581 0.752 103.481 99.295 1.00 71.27 O
ATOM 9 C3' A B 581 0.063 105.361 98.091 1.00 68.08 C
ATOM 10 O3' A B 581 0.296 106.737 97.861 1.00 63.21 O
ATOM 11 C2' A B 581 0.833 104.463 97.136 1.00 70.47 C
ATOM 12 O2' A B 581 2.166 104.888 96.948 1.00 72.88 O
ATOM 13 C1' A B 581 0.856 103.150 97.920 1.00 72.71 C
ATOM 14 N9 A B 581 -0.277 102.298 97.571 1.00 76.22 N
ATOM 15 C8 A B 581 -1.417 102.067 98.298 1.00 78.03 C
ATOM 16 N7 A B 581 -2.276 101.276 97.699 1.00 81.14 N
ATOM 17 C5 A B 581 -1.658 100.960 96.497 1.00 81.42 C
ATOM 18 C6 A B 581 -2.060 100.165 95.398 1.00 82.68 C
ATOM 19 N6 A B 581 -3.234 99.528 95.328 1.00 81.97 N
ATOM 20 N1 A B 581 -1.202 100.055 94.358 1.00 84.37 N
ATOM 21 C2 A B 581 -0.030 100.707 94.422 1.00 83.53 C
ATOM 22 N3 A B 581 0.453 101.487 95.391 1.00 81.81 N
ATOM 23 C4 A B 581 -0.419 101.574 96.411 1.00 79.84 C
ATOM 24 P C B 582 -0.813 107.602 97.091 1.00 59.83 P
ATOM 25 OP1 C B 582 -0.290 108.987 96.951 1.00 59.54 O
ATOM 26 OP2 C B 582 -2.102 107.380 97.784 1.00 61.43 O
ATOM 27 O5' C B 582 -0.889 106.913 95.656 1.00 58.67 O
TER
ATOM 2 P G A 580 -6.037 103.719 105.171 1.00 72.00 P
ATOM 3 OP1 G A 580 -5.531 105.121 105.263 1.00 71.17 O
ATOM 4 OP2 G A 580 -7.293 103.431 104.424 1.00 71.67 O
ATOM 5 O5' G A 580 -4.910 102.795 104.529 1.00 71.76 O
ATOM 6 C5' G A 580 -3.515 103.023 104.799 1.00 70.34 C
ATOM 7 C4' G A 580 -2.669 102.006 104.066 1.00 70.26 C
ATOM 8 O4' G A 580 -3.023 100.670 104.513 1.00 70.70 O
ATOM 9 C3' G A 580 -2.851 101.947 102.560 1.00 69.65 C
ATOM 10 O3' G A 580 -2.034 102.903 101.913 1.00 69.12 O
ATOM 11 C2' G A 580 -2.364 100.541 102.233 1.00 69.76 C
ATOM 12 O2' G A 580 -0.957 100.440 102.194 1.00 70.14 O
ATOM 13 C1' G A 580 -2.871 99.755 103.443 1.00 70.10 C
ATOM 14 N9 G A 580 -4.158 99.127 103.187 1.00 70.87 N
ATOM 15 C8 G A 580 -5.402 99.631 103.475 1.00 72.22 C
ATOM 16 N7 G A 580 -6.372 98.843 103.097 1.00 73.63 N
ATOM 17 C5 G A 580 -5.728 97.752 102.529 1.00 72.20 C
ATOM 18 C6 G A 580 -6.256 96.575 101.945 1.00 72.52 C
ATOM 19 O6 G A 580 -7.446 96.238 101.816 1.00 72.95 O
ATOM 20 N1 G A 580 -5.240 95.740 101.489 1.00 72.54 N
ATOM 21 C2 G A 580 -3.895 95.999 101.587 1.00 71.62 C
ATOM 22 N2 G A 580 -3.075 95.070 101.071 1.00 72.41 N
ATOM 23 N3 G A 580 -3.394 97.084 102.141 1.00 70.64 N
ATOM 24 C4 G A 580 -4.359 97.911 102.584 1.00 71.09 C
ATOM 25 P A A 581 -2.651 104.313 101.477 1.00 69.94 P
ATOM 26 OP1 A A 581 -2.495 105.234 102.640 1.00 68.58 O
ATOM 27 OP2 A A 581 -3.992 104.106 100.872 1.00 69.87 O
ATOM 28 O5' A A 581 -1.670 104.805 100.324 1.00 71.03 O
TER
ATOM 1 O3' G B 580 -2.034 102.903 101.913 1.00 69.12 O
ATOM 2 P A B 581 -2.651 104.313 101.477 1.00 69.94 P
ATOM 3 OP1 A B 581 -2.495 105.234 102.640 1.00 68.58 O
ATOM 4 OP2 A B 581 -3.992 104.106 100.872 1.00 69.87 O
ATOM 5 O5' A B 581 -1.670 104.805 100.324 1.00 71.03 O
ATOM 6 C5' A B 581 -0.314 105.221 100.616 1.00 70.29 C
ATOM 7 C4' A B 581 0.589 104.918 99.442 1.00 69.38 C
ATOM 8 O4' A B 581 0.752 103.481 99.295 1.00 71.27 O
ATOM 9 C3' A B 581 0.063 105.361 98.091 1.00 68.08 C
ATOM 10 O3' A B 581 0.296 106.737 97.861 1.00 63.21 O
ATOM 11 C2' A B 581 0.833 104.463 97.136 1.00 70.47 C
ATOM 12 O2' A B 581 2.166 104.888 96.948 1.00 72.88 O
ATOM 13 C1' A B 581 0.856 103.150 97.920 1.00 72.71 C
ATOM 14 N9 A B 581 -0.277 102.298 97.571 1.00 76.22 N
ATOM 15 C8 A B 581 -1.417 102.067 98.298 1.00 78.03 C
ATOM 16 N7 A B 581 -2.276 101.276 97.699 1.00 81.14 N
ATOM 17 C5 A B 581 -1.658 100.960 96.497 1.00 81.42 C
ATOM 18 C6 A B 581 -2.060 100.165 95.398 1.00 82.68 C
ATOM 19 N6 A B 581 -3.234 99.528 95.328 1.00 81.97 N
ATOM 20 N1 A B 581 -1.202 100.055 94.358 1.00 84.37 N
ATOM 21 C2 A B 581 -0.030 100.707 94.422 1.00 83.53 C
ATOM 22 N3 A B 581 0.453 101.487 95.391 1.00 81.81 N
ATOM 23 C4 A B 581 -0.419 101.574 96.411 1.00 79.84 C
ATOM 24 P C B 582 -0.813 107.602 97.091 1.00 59.83 P
ATOM 25 OP1 C B 582 -0.290 108.987 96.951 1.00 59.54 O
ATOM 26 OP2 C B 582 -2.102 107.380 97.784 1.00 61.43 O
ATOM 27 O5' C B 582 -0.889 106.913 95.656 1.00 58.67 O
TER
Atoms:
OP1: (-5.531,105.121,105.263)
OP2: (-7.293,103.431,104.424)
C3': (-2.851,101.947,102.560)
C1': (-2.871,99.755,103.443)
C5': (-3.515,103.023,104.799)
O6: (-7.446,96.238,101.816)
O4': (-3.023,100.670,104.513)
C8: (-5.402,99.631,103.475)
C2: (-3.895,95.999,101.587)
C6: (-6.256,96.575,101.945)
C5: (-5.728,97.752,102.529)
C4: (-4.359,97.911,102.584)
P: (-6.037,103.719,105.171)
C4': (-2.669,102.006,104.066)
C2': (-2.364,100.541,102.233)
O2': (-0.957,100.440,102.194)
N1: (-5.240,95.740,101.489)
N2: (-3.075,95.070,101.071)
N3: (-3.394,97.084,102.141)
N7: (-6.372,98.843,103.097)
N9: (-4.158,99.127,103.187)
O5': (-4.910,102.795,104.529)
O3': (-2.034,102.903,101.913)
OP2: (-7.293,103.431,104.424)
C3': (-2.851,101.947,102.560)
C1': (-2.871,99.755,103.443)
C5': (-3.515,103.023,104.799)
O6: (-7.446,96.238,101.816)
O4': (-3.023,100.670,104.513)
C8: (-5.402,99.631,103.475)
C2: (-3.895,95.999,101.587)
C6: (-6.256,96.575,101.945)
C5: (-5.728,97.752,102.529)
C4: (-4.359,97.911,102.584)
P: (-6.037,103.719,105.171)
C4': (-2.669,102.006,104.066)
C2': (-2.364,100.541,102.233)
O2': (-0.957,100.440,102.194)
N1: (-5.240,95.740,101.489)
N2: (-3.075,95.070,101.071)
N3: (-3.394,97.084,102.141)
N7: (-6.372,98.843,103.097)
N9: (-4.158,99.127,103.187)
O5': (-4.910,102.795,104.529)
O3': (-2.034,102.903,101.913)
OP1: (-2.495,105.234,102.640)
OP2: (-3.992,104.106,100.872)
C3': (0.063,105.361,98.091)
C1': (0.856,103.150,97.920)
C5': (-0.314,105.221,100.616)
O4': (0.752,103.481,99.295)
C8: (-1.417,102.067,98.298)
O2': (2.166,104.888,96.948)
C6: (-2.060,100.165,95.398)
C5: (-1.658,100.960,96.497)
C4: (-0.419,101.574,96.411)
P: (-2.651,104.313,101.477)
C4': (0.589,104.918,99.442)
C2': (0.833,104.463,97.136)
C2: (-0.030,100.707,94.422)
N1: (-1.202,100.055,94.358)
N3: (0.453,101.487,95.391)
N6: (-3.234,99.528,95.328)
N7: (-2.276,101.276,97.699)
N9: (-0.277,102.298,97.571)
O5': (-1.670,104.805,100.324)
O3': (0.296,106.737,97.861)
OP2: (-3.992,104.106,100.872)
C3': (0.063,105.361,98.091)
C1': (0.856,103.150,97.920)
C5': (-0.314,105.221,100.616)
O4': (0.752,103.481,99.295)
C8: (-1.417,102.067,98.298)
O2': (2.166,104.888,96.948)
C6: (-2.060,100.165,95.398)
C5: (-1.658,100.960,96.497)
C4: (-0.419,101.574,96.411)
P: (-2.651,104.313,101.477)
C4': (0.589,104.918,99.442)
C2': (0.833,104.463,97.136)
C2: (-0.030,100.707,94.422)
N1: (-1.202,100.055,94.358)
N3: (0.453,101.487,95.391)
N6: (-3.234,99.528,95.328)
N7: (-2.276,101.276,97.699)
N9: (-0.277,102.298,97.571)
O5': (-1.670,104.805,100.324)
O3': (0.296,106.737,97.861)
Image (generated by PyMOL):