Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.004 103.963 106.554 1.00 65.89 O
ATOM 2 P G A 580 -6.009 104.424 105.013 1.00 66.63 P
ATOM 3 OP1 G A 580 -5.699 105.874 104.983 1.00 64.55 O
ATOM 4 OP2 G A 580 -7.246 103.919 104.357 1.00 67.88 O
ATOM 5 O5' G A 580 -4.806 103.610 104.361 1.00 66.71 O
ATOM 6 C5' G A 580 -3.441 103.850 104.746 1.00 62.71 C
ATOM 7 C4' G A 580 -2.536 102.853 104.066 1.00 60.70 C
ATOM 8 O4' G A 580 -2.851 101.516 104.532 1.00 59.81 O
ATOM 9 C3' G A 580 -2.684 102.762 102.556 1.00 59.35 C
ATOM 10 O3' G A 580 -1.894 103.740 101.909 1.00 58.90 O
ATOM 11 C2' G A 580 -2.137 101.371 102.264 1.00 60.38 C
ATOM 12 O2' G A 580 -0.724 101.326 102.212 1.00 62.26 O
ATOM 13 C1' G A 580 -2.628 100.587 103.484 1.00 60.12 C
ATOM 14 N9 G A 580 -3.872 99.886 103.205 1.00 59.75 N
ATOM 15 C8 G A 580 -5.150 100.324 103.453 1.00 61.77 C
ATOM 16 N7 G A 580 -6.064 99.489 103.040 1.00 62.60 N
ATOM 17 C5 G A 580 -5.345 98.436 102.498 1.00 60.98 C
ATOM 18 C6 G A 580 -5.793 97.246 101.886 1.00 61.75 C
ATOM 19 O6 G A 580 -6.953 96.874 101.689 1.00 64.84 O
ATOM 20 N1 G A 580 -4.728 96.449 101.480 1.00 62.01 N
ATOM 21 C2 G A 580 -3.401 96.764 101.642 1.00 61.69 C
ATOM 22 N2 G A 580 -2.521 95.867 101.186 1.00 60.88 N
ATOM 23 N3 G A 580 -2.972 97.877 102.209 1.00 60.48 N
ATOM 24 C4 G A 580 -3.990 98.661 102.608 1.00 60.27 C
ATOM 25 P A A 581 -2.575 105.064 101.312 1.00 61.89 P
ATOM 26 OP1 A A 581 -2.548 106.084 102.400 1.00 60.91 O
ATOM 27 OP2 A A 581 -3.862 104.731 100.654 1.00 60.88 O
ATOM 28 O5' A A 581 -1.554 105.523 100.179 1.00 62.35 O
TER
ATOM 1 O3' G B 580 -1.894 103.740 101.909 1.00 58.90 O
ATOM 2 P A B 581 -2.575 105.064 101.312 1.00 61.89 P
ATOM 3 OP1 A B 581 -2.548 106.084 102.400 1.00 60.91 O
ATOM 4 OP2 A B 581 -3.862 104.731 100.654 1.00 60.88 O
ATOM 5 O5' A B 581 -1.554 105.523 100.179 1.00 62.35 O
ATOM 6 C5' A B 581 -0.242 106.031 100.519 1.00 60.99 C
ATOM 7 C4' A B 581 0.747 105.695 99.427 1.00 60.80 C
ATOM 8 O4' A B 581 0.929 104.258 99.359 1.00 62.53 O
ATOM 9 C3' A B 581 0.310 106.084 98.026 1.00 60.20 C
ATOM 10 O3' A B 581 0.606 107.439 97.753 1.00 57.19 O
ATOM 11 C2' A B 581 1.103 105.128 97.155 1.00 61.86 C
ATOM 12 O2' A B 581 2.433 105.559 96.979 1.00 63.74 O
ATOM 13 C1' A B 581 1.069 103.856 98.006 1.00 64.21 C
ATOM 14 N9 A B 581 -0.073 103.006 97.679 1.00 67.83 N
ATOM 15 C8 A B 581 -1.201 102.796 98.429 1.00 69.25 C
ATOM 16 N7 A B 581 -2.077 102.010 97.855 1.00 71.94 N
ATOM 17 C5 A B 581 -1.484 101.675 96.649 1.00 72.23 C
ATOM 18 C6 A B 581 -1.914 100.879 95.573 1.00 73.46 C
ATOM 19 N6 A B 581 -3.090 100.254 95.538 1.00 74.50 N
ATOM 20 N1 A B 581 -1.085 100.748 94.518 1.00 74.11 N
ATOM 21 C2 A B 581 0.097 101.382 94.551 1.00 75.36 C
ATOM 22 N3 A B 581 0.611 102.161 95.503 1.00 74.18 N
ATOM 23 C4 A B 581 -0.242 102.270 96.534 1.00 71.18 C
ATOM 24 P C B 582 -0.497 108.350 97.038 1.00 55.71 P
ATOM 25 OP1 C B 582 0.039 109.726 96.907 1.00 55.28 O
ATOM 26 OP2 C B 582 -1.773 108.131 97.748 1.00 56.98 O
ATOM 27 O5' C B 582 -0.624 107.702 95.590 1.00 54.57 O
TER
ATOM 2 P G A 580 -6.009 104.424 105.013 1.00 66.63 P
ATOM 3 OP1 G A 580 -5.699 105.874 104.983 1.00 64.55 O
ATOM 4 OP2 G A 580 -7.246 103.919 104.357 1.00 67.88 O
ATOM 5 O5' G A 580 -4.806 103.610 104.361 1.00 66.71 O
ATOM 6 C5' G A 580 -3.441 103.850 104.746 1.00 62.71 C
ATOM 7 C4' G A 580 -2.536 102.853 104.066 1.00 60.70 C
ATOM 8 O4' G A 580 -2.851 101.516 104.532 1.00 59.81 O
ATOM 9 C3' G A 580 -2.684 102.762 102.556 1.00 59.35 C
ATOM 10 O3' G A 580 -1.894 103.740 101.909 1.00 58.90 O
ATOM 11 C2' G A 580 -2.137 101.371 102.264 1.00 60.38 C
ATOM 12 O2' G A 580 -0.724 101.326 102.212 1.00 62.26 O
ATOM 13 C1' G A 580 -2.628 100.587 103.484 1.00 60.12 C
ATOM 14 N9 G A 580 -3.872 99.886 103.205 1.00 59.75 N
ATOM 15 C8 G A 580 -5.150 100.324 103.453 1.00 61.77 C
ATOM 16 N7 G A 580 -6.064 99.489 103.040 1.00 62.60 N
ATOM 17 C5 G A 580 -5.345 98.436 102.498 1.00 60.98 C
ATOM 18 C6 G A 580 -5.793 97.246 101.886 1.00 61.75 C
ATOM 19 O6 G A 580 -6.953 96.874 101.689 1.00 64.84 O
ATOM 20 N1 G A 580 -4.728 96.449 101.480 1.00 62.01 N
ATOM 21 C2 G A 580 -3.401 96.764 101.642 1.00 61.69 C
ATOM 22 N2 G A 580 -2.521 95.867 101.186 1.00 60.88 N
ATOM 23 N3 G A 580 -2.972 97.877 102.209 1.00 60.48 N
ATOM 24 C4 G A 580 -3.990 98.661 102.608 1.00 60.27 C
ATOM 25 P A A 581 -2.575 105.064 101.312 1.00 61.89 P
ATOM 26 OP1 A A 581 -2.548 106.084 102.400 1.00 60.91 O
ATOM 27 OP2 A A 581 -3.862 104.731 100.654 1.00 60.88 O
ATOM 28 O5' A A 581 -1.554 105.523 100.179 1.00 62.35 O
TER
ATOM 1 O3' G B 580 -1.894 103.740 101.909 1.00 58.90 O
ATOM 2 P A B 581 -2.575 105.064 101.312 1.00 61.89 P
ATOM 3 OP1 A B 581 -2.548 106.084 102.400 1.00 60.91 O
ATOM 4 OP2 A B 581 -3.862 104.731 100.654 1.00 60.88 O
ATOM 5 O5' A B 581 -1.554 105.523 100.179 1.00 62.35 O
ATOM 6 C5' A B 581 -0.242 106.031 100.519 1.00 60.99 C
ATOM 7 C4' A B 581 0.747 105.695 99.427 1.00 60.80 C
ATOM 8 O4' A B 581 0.929 104.258 99.359 1.00 62.53 O
ATOM 9 C3' A B 581 0.310 106.084 98.026 1.00 60.20 C
ATOM 10 O3' A B 581 0.606 107.439 97.753 1.00 57.19 O
ATOM 11 C2' A B 581 1.103 105.128 97.155 1.00 61.86 C
ATOM 12 O2' A B 581 2.433 105.559 96.979 1.00 63.74 O
ATOM 13 C1' A B 581 1.069 103.856 98.006 1.00 64.21 C
ATOM 14 N9 A B 581 -0.073 103.006 97.679 1.00 67.83 N
ATOM 15 C8 A B 581 -1.201 102.796 98.429 1.00 69.25 C
ATOM 16 N7 A B 581 -2.077 102.010 97.855 1.00 71.94 N
ATOM 17 C5 A B 581 -1.484 101.675 96.649 1.00 72.23 C
ATOM 18 C6 A B 581 -1.914 100.879 95.573 1.00 73.46 C
ATOM 19 N6 A B 581 -3.090 100.254 95.538 1.00 74.50 N
ATOM 20 N1 A B 581 -1.085 100.748 94.518 1.00 74.11 N
ATOM 21 C2 A B 581 0.097 101.382 94.551 1.00 75.36 C
ATOM 22 N3 A B 581 0.611 102.161 95.503 1.00 74.18 N
ATOM 23 C4 A B 581 -0.242 102.270 96.534 1.00 71.18 C
ATOM 24 P C B 582 -0.497 108.350 97.038 1.00 55.71 P
ATOM 25 OP1 C B 582 0.039 109.726 96.907 1.00 55.28 O
ATOM 26 OP2 C B 582 -1.773 108.131 97.748 1.00 56.98 O
ATOM 27 O5' C B 582 -0.624 107.702 95.590 1.00 54.57 O
TER
Atoms:
OP1: (-5.699,105.874,104.983)
OP2: (-7.246,103.919,104.357)
C3': (-2.684,102.762,102.556)
C1': (-2.628,100.587,103.484)
C5': (-3.441,103.850,104.746)
O6: (-6.953,96.874,101.689)
O4': (-2.851,101.516,104.532)
C8: (-5.150,100.324,103.453)
C2: (-3.401,96.764,101.642)
C6: (-5.793,97.246,101.886)
C5: (-5.345,98.436,102.498)
C4: (-3.990,98.661,102.608)
P: (-6.009,104.424,105.013)
C4': (-2.536,102.853,104.066)
C2': (-2.137,101.371,102.264)
O2': (-0.724,101.326,102.212)
N1: (-4.728,96.449,101.480)
N2: (-2.521,95.867,101.186)
N3: (-2.972,97.877,102.209)
N7: (-6.064,99.489,103.040)
N9: (-3.872,99.886,103.205)
O5': (-4.806,103.610,104.361)
O3': (-1.894,103.740,101.909)
OP2: (-7.246,103.919,104.357)
C3': (-2.684,102.762,102.556)
C1': (-2.628,100.587,103.484)
C5': (-3.441,103.850,104.746)
O6: (-6.953,96.874,101.689)
O4': (-2.851,101.516,104.532)
C8: (-5.150,100.324,103.453)
C2: (-3.401,96.764,101.642)
C6: (-5.793,97.246,101.886)
C5: (-5.345,98.436,102.498)
C4: (-3.990,98.661,102.608)
P: (-6.009,104.424,105.013)
C4': (-2.536,102.853,104.066)
C2': (-2.137,101.371,102.264)
O2': (-0.724,101.326,102.212)
N1: (-4.728,96.449,101.480)
N2: (-2.521,95.867,101.186)
N3: (-2.972,97.877,102.209)
N7: (-6.064,99.489,103.040)
N9: (-3.872,99.886,103.205)
O5': (-4.806,103.610,104.361)
O3': (-1.894,103.740,101.909)
OP1: (-2.548,106.084,102.400)
OP2: (-3.862,104.731,100.654)
C3': (0.310,106.084,98.026)
C1': (1.069,103.856,98.006)
C5': (-0.242,106.031,100.519)
O4': (0.929,104.258,99.359)
C8: (-1.201,102.796,98.429)
O2': (2.433,105.559,96.979)
C6: (-1.914,100.879,95.573)
C5: (-1.484,101.675,96.649)
C4: (-0.242,102.270,96.534)
P: (-2.575,105.064,101.312)
C4': (0.747,105.695,99.427)
C2': (1.103,105.128,97.155)
C2: (0.097,101.382,94.551)
N1: (-1.085,100.748,94.518)
N3: (0.611,102.161,95.503)
N6: (-3.090,100.254,95.538)
N7: (-2.077,102.010,97.855)
N9: (-0.073,103.006,97.679)
O5': (-1.554,105.523,100.179)
O3': (0.606,107.439,97.753)
OP2: (-3.862,104.731,100.654)
C3': (0.310,106.084,98.026)
C1': (1.069,103.856,98.006)
C5': (-0.242,106.031,100.519)
O4': (0.929,104.258,99.359)
C8: (-1.201,102.796,98.429)
O2': (2.433,105.559,96.979)
C6: (-1.914,100.879,95.573)
C5: (-1.484,101.675,96.649)
C4: (-0.242,102.270,96.534)
P: (-2.575,105.064,101.312)
C4': (0.747,105.695,99.427)
C2': (1.103,105.128,97.155)
C2: (0.097,101.382,94.551)
N1: (-1.085,100.748,94.518)
N3: (0.611,102.161,95.503)
N6: (-3.090,100.254,95.538)
N7: (-2.077,102.010,97.855)
N9: (-0.073,103.006,97.679)
O5': (-1.554,105.523,100.179)
O3': (0.606,107.439,97.753)
Image (generated by PyMOL):