ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01076:01204

Extra

PDB:
ATOM 1 O3' U A1075 35.277 98.886 142.267 1.00 39.62 O
ATOM 2 P A A1076 35.320 99.639 143.688 1.00 39.82 P
ATOM 3 OP1 A A1076 36.665 99.345 144.245 1.00 38.99 O
ATOM 4 OP2 A A1076 34.109 99.294 144.468 1.00 39.34 O
ATOM 5 O5' A A1076 35.230 101.191 143.336 1.00 37.53 O
ATOM 6 C5' A A1076 36.375 101.897 142.826 1.00 37.94 C
ATOM 7 C4' A A1076 36.113 103.386 142.798 1.00 37.11 C
ATOM 8 O4' A A1076 34.945 103.637 141.971 1.00 38.30 O
ATOM 9 C3' A A1076 35.833 104.046 144.142 1.00 36.93 C
ATOM 10 O3' A A1076 36.333 105.373 144.126 1.00 38.57 O
ATOM 11 C2' A A1076 34.313 104.077 144.187 1.00 37.78 C
ATOM 12 O2' A A1076 33.797 105.120 144.983 1.00 38.76 O
ATOM 13 C1' A A1076 33.967 104.323 142.722 1.00 37.44 C
ATOM 14 N9 A A1076 32.655 103.777 142.381 1.00 37.09 N
ATOM 15 C8 A A1076 32.281 102.457 142.295 1.00 37.70 C
ATOM 16 N7 A A1076 31.011 102.285 142.022 1.00 37.23 N
ATOM 17 C5 A A1076 30.518 103.576 141.909 1.00 35.24 C
ATOM 18 C6 A A1076 29.237 104.074 141.645 1.00 34.83 C
ATOM 19 N6 A A1076 28.169 103.298 141.432 1.00 37.40 N
ATOM 20 N1 A A1076 29.080 105.411 141.608 1.00 33.54 N
ATOM 21 C2 A A1076 30.146 106.186 141.821 1.00 34.42 C
ATOM 22 N3 A A1076 31.402 105.839 142.079 1.00 34.75 N
ATOM 23 C4 A A1076 31.522 104.503 142.113 1.00 35.43 C
ATOM 24 P A A1077 37.840 105.660 144.605 1.00 42.91 P
ATOM 25 OP1 A A1077 38.228 104.619 145.596 1.00 42.45 O
ATOM 26 OP2 A A1077 37.935 107.095 144.967 1.00 43.01 O
ATOM 27 O5' A A1077 38.717 105.401 143.299 1.00 43.16 O
TER

ATOM 1 O3' U B1203 25.357 105.085 139.813 1.00 42.81 O
ATOM 2 P C B1204 24.560 104.796 141.182 1.00 43.92 P
ATOM 3 OP1 C B1204 23.744 105.989 141.545 1.00 41.53 O
ATOM 4 OP2 C B1204 25.549 104.267 142.156 1.00 42.34 O
ATOM 5 O5' C B1204 23.564 103.619 140.788 1.00 40.32 O
ATOM 6 C5' C B1204 24.052 102.365 140.300 1.00 42.55 C
ATOM 7 C4' C B1204 22.995 101.311 140.475 1.00 46.86 C
ATOM 8 O4' C B1204 22.743 101.146 141.895 1.00 49.34 O
ATOM 9 C3' C B1204 21.643 101.679 139.884 1.00 48.44 C
ATOM 10 O3' C B1204 21.585 101.340 138.499 1.00 48.53 O
ATOM 11 C2' C B1204 20.678 100.876 140.747 1.00 48.91 C
ATOM 12 O2' C B1204 20.606 99.515 140.372 1.00 49.27 O
ATOM 13 C1' C B1204 21.355 100.967 142.117 1.00 50.93 C
ATOM 14 N1 C B1204 20.875 102.074 142.968 1.00 53.54 N
ATOM 15 C2 C B1204 19.912 101.807 143.953 1.00 55.48 C
ATOM 16 O2 C B1204 19.485 100.649 144.082 1.00 57.15 O
ATOM 17 N3 C B1204 19.470 102.816 144.740 1.00 56.76 N
ATOM 18 C4 C B1204 19.948 104.051 144.572 1.00 57.19 C
ATOM 19 N4 C B1204 19.481 105.022 145.371 1.00 55.50 N
ATOM 20 C5 C B1204 20.927 104.351 143.578 1.00 56.69 C
ATOM 21 C6 C B1204 21.357 103.343 142.807 1.00 54.61 C
ATOM 22 P A B1205 20.503 102.052 137.541 1.00 48.10 P
ATOM 23 OP1 A B1205 19.230 102.158 138.293 1.00 50.87 O
ATOM 24 OP2 A B1205 20.521 101.355 136.236 1.00 49.16 O
ATOM 25 O5' A B1205 21.040 103.535 137.326 1.00 46.99 O
TER

Atoms:
OP1: (36.665,99.345,144.245)
OP2: (34.109,99.294,144.468)
C3': (35.833,104.046,144.142)
C1': (33.967,104.323,142.722)
C5': (36.375,101.897,142.826)
O4': (34.945,103.637,141.971)
C8: (32.281,102.457,142.295)
O2': (33.797,105.120,144.983)
C6: (29.237,104.074,141.645)
C5: (30.518,103.576,141.909)
C4: (31.522,104.503,142.113)
P: (35.320,99.639,143.688)
C4': (36.113,103.386,142.798)
C2': (34.313,104.077,144.187)
C2: (30.146,106.186,141.821)
N1: (29.080,105.411,141.608)
N3: (31.402,105.839,142.079)
N6: (28.169,103.298,141.432)
N7: (31.011,102.285,142.022)
N9: (32.655,103.777,142.381)
O5': (35.230,101.191,143.336)
O3': (36.333,105.373,144.126)
C2: (19.912,101.807,143.953)
OP1: (23.744,105.989,141.545)
OP2: (25.549,104.267,142.156)
C4: (19.948,104.051,144.572)
O5': (23.564,103.619,140.788)
C3': (21.643,101.679,139.884)
C1': (21.355,100.967,142.117)
O4': (22.743,101.146,141.895)
C5': (24.052,102.365,140.300)
P: (24.560,104.796,141.182)
O2: (19.485,100.649,144.082)
C4': (22.995,101.311,140.475)
C2': (20.678,100.876,140.747)
O2': (20.606,99.515,140.372)
N1: (20.875,102.074,142.968)
N3: (19.470,102.816,144.740)
N4: (19.481,105.022,145.371)
C6: (21.357,103.343,142.807)
C5: (20.927,104.351,143.578)
O3': (21.585,101.340,138.499)
Image (generated by PyMOL):
PyMOL image
show in jmol