ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HVY:E26:E27

Extra

PDB:
ATOM 1 P A A 26 -34.163 -44.121 32.834 1.00 54.28 P
ATOM 2 OP1 A A 26 -32.910 -43.880 33.587 1.00 54.33 O
ATOM 3 OP2 A A 26 -34.851 -42.996 32.162 1.00 54.51 O
ATOM 4 O5' A A 26 -33.938 -45.279 31.749 1.00 53.96 O
ATOM 5 C5' A A 26 -32.708 -45.394 31.036 1.00 53.55 C
ATOM 6 C4' A A 26 -32.888 -45.116 29.550 1.00 53.19 C
ATOM 7 O4' A A 26 -34.151 -45.657 29.080 1.00 52.91 O
ATOM 8 C3' A A 26 -32.872 -43.639 29.162 1.00 52.92 C
ATOM 9 O3' A A 26 -31.993 -43.446 28.052 1.00 52.72 O
ATOM 10 C2' A A 26 -34.327 -43.329 28.806 1.00 52.87 C
ATOM 11 O2' A A 26 -34.450 -42.357 27.785 1.00 52.82 O
ATOM 12 C1' A A 26 -34.841 -44.684 28.322 1.00 52.75 C
ATOM 13 N9 A A 26 -36.278 -44.874 28.517 1.00 52.67 N
ATOM 14 C8 A A 26 -36.941 -44.960 29.712 1.00 52.65 C
ATOM 15 N7 A A 26 -38.236 -45.131 29.594 1.00 52.67 N
ATOM 16 C5 A A 26 -38.442 -45.162 28.226 1.00 52.63 C
ATOM 17 C6 A A 26 -39.606 -45.318 27.442 1.00 52.66 C
ATOM 18 N6 A A 26 -40.825 -45.476 27.967 1.00 52.70 N
ATOM 19 N1 A A 26 -39.471 -45.302 26.095 1.00 52.69 N
ATOM 20 C2 A A 26 -38.247 -45.142 25.570 1.00 52.67 C
ATOM 21 N3 A A 26 -37.082 -44.987 26.206 1.00 52.63 N
ATOM 22 C4 A A 26 -37.245 -45.007 27.543 1.00 52.64 C
ATOM 23 P A A 27 -30.490 -42.920 28.239 1.00 52.56 P
ATOM 24 OP1 A A 27 -29.615 -43.789 27.421 1.00 52.48 O
ATOM 25 OP2 A A 27 -30.212 -42.743 29.684 1.00 52.53 O
ATOM 26 O5' A A 27 -30.532 -41.461 27.580 1.00 52.36 O
TER

ATOM 1 O3' A B 26 -31.993 -43.446 28.052 1.00 52.72 O
ATOM 2 P A B 27 -30.490 -42.920 28.239 1.00 52.56 P
ATOM 3 OP1 A B 27 -29.615 -43.789 27.421 1.00 52.48 O
ATOM 4 OP2 A B 27 -30.212 -42.743 29.684 1.00 52.53 O
ATOM 5 O5' A B 27 -30.532 -41.461 27.580 1.00 52.36 O
ATOM 6 C5' A B 27 -31.124 -41.260 26.296 1.00 51.92 C
ATOM 7 C4' A B 27 -30.558 -40.038 25.585 1.00 51.50 C
ATOM 8 O4' A B 27 -31.411 -39.691 24.464 1.00 51.26 O
ATOM 9 C3' A B 27 -30.429 -38.765 26.417 1.00 51.32 C
ATOM 10 O3' A B 27 -29.231 -38.073 26.051 1.00 51.39 O
ATOM 11 C2' A B 27 -31.692 -37.968 26.080 1.00 51.17 C
ATOM 12 O2' A B 27 -31.482 -36.568 26.079 1.00 51.21 O
ATOM 13 C1' A B 27 -32.048 -38.443 24.671 1.00 50.83 C
ATOM 14 N9 A B 27 -33.483 -38.625 24.426 1.00 50.71 N
ATOM 15 C8 A B 27 -34.472 -38.804 25.357 1.00 50.60 C
ATOM 16 N7 A B 27 -35.672 -38.944 24.845 1.00 50.57 N
ATOM 17 C5 A B 27 -35.460 -38.855 23.480 1.00 50.59 C
ATOM 18 C6 A B 27 -36.336 -38.925 22.374 1.00 50.56 C
ATOM 19 N6 A B 27 -37.654 -39.109 22.495 1.00 50.59 N
ATOM 20 N1 A B 27 -35.807 -38.796 21.136 1.00 50.59 N
ATOM 21 C2 A B 27 -34.484 -38.610 21.016 1.00 50.57 C
ATOM 22 N3 A B 27 -33.563 -38.529 21.980 1.00 50.56 N
ATOM 23 C4 A B 27 -34.117 -38.659 23.202 1.00 50.63 C
ATOM 24 P G B 28 -28.312 -37.345 27.145 1.00 51.44 P
ATOM 25 OP1 G B 28 -27.131 -36.797 26.441 1.00 51.61 O
ATOM 26 OP2 G B 28 -28.112 -38.269 28.285 1.00 51.51 O
ATOM 27 O5' G B 28 -29.225 -36.121 27.621 1.00 51.52 O
TER

Atoms:
OP1: (-32.910,-43.880,33.587)
OP2: (-34.851,-42.996,32.162)
C3': (-32.872,-43.639,29.162)
C1': (-34.841,-44.684,28.322)
C5': (-32.708,-45.394,31.036)
O4': (-34.151,-45.657,29.080)
C8: (-36.941,-44.960,29.712)
O2': (-34.450,-42.357,27.785)
C6: (-39.606,-45.318,27.442)
C5: (-38.442,-45.162,28.226)
C4: (-37.245,-45.007,27.543)
P: (-34.163,-44.121,32.834)
C4': (-32.888,-45.116,29.550)
C2': (-34.327,-43.329,28.806)
C2: (-38.247,-45.142,25.570)
N1: (-39.471,-45.302,26.095)
N3: (-37.082,-44.987,26.206)
N6: (-40.825,-45.476,27.967)
N7: (-38.236,-45.131,29.594)
N9: (-36.278,-44.874,28.517)
O5': (-33.938,-45.279,31.749)
O3': (-31.993,-43.446,28.052)
OP1: (-29.615,-43.789,27.421)
OP2: (-30.212,-42.743,29.684)
C3': (-30.429,-38.765,26.417)
C1': (-32.048,-38.443,24.671)
C5': (-31.124,-41.260,26.296)
O4': (-31.411,-39.691,24.464)
C8: (-34.472,-38.804,25.357)
O2': (-31.482,-36.568,26.079)
C6: (-36.336,-38.925,22.374)
C5: (-35.460,-38.855,23.480)
C4: (-34.117,-38.659,23.202)
P: (-30.490,-42.920,28.239)
C4': (-30.558,-40.038,25.585)
C2': (-31.692,-37.968,26.080)
C2: (-34.484,-38.610,21.016)
N1: (-35.807,-38.796,21.136)
N3: (-33.563,-38.529,21.980)
N6: (-37.654,-39.109,22.495)
N7: (-35.672,-38.944,24.845)
N9: (-33.483,-38.625,24.426)
O5': (-30.532,-41.461,27.580)
O3': (-29.231,-38.073,26.051)
Image (generated by PyMOL):
PyMOL image
show in jmol