Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.289 88.258 114.560 1.00 65.33 O
ATOM 2 P A A 575 -12.963 88.835 113.095 1.00 66.22 P
ATOM 3 OP1 A A 575 -12.451 90.222 113.256 1.00 66.43 O
ATOM 4 OP2 A A 575 -14.152 88.585 112.240 1.00 67.01 O
ATOM 5 O5' A A 575 -11.797 87.900 112.547 1.00 65.20 O
ATOM 6 C5' A A 575 -11.574 87.757 111.126 1.00 64.12 C
ATOM 7 C4' A A 575 -10.124 87.433 110.848 1.00 62.02 C
ATOM 8 O4' A A 575 -9.296 88.532 111.319 1.00 60.85 O
ATOM 9 C3' A A 575 -9.574 86.180 111.515 1.00 61.34 C
ATOM 10 O3' A A 575 -8.607 85.606 110.650 1.00 61.74 O
ATOM 11 C2' A A 575 -8.913 86.734 112.775 1.00 61.69 C
ATOM 12 O2' A A 575 -7.871 85.914 113.271 1.00 62.37 O
ATOM 13 C1' A A 575 -8.356 88.057 112.258 1.00 60.04 C
ATOM 14 N9 A A 575 -8.158 89.096 113.270 1.00 58.82 N
ATOM 15 C8 A A 575 -9.117 89.830 113.923 1.00 59.01 C
ATOM 16 N7 A A 575 -8.629 90.726 114.747 1.00 58.98 N
ATOM 17 C5 A A 575 -7.254 90.566 114.638 1.00 57.84 C
ATOM 18 C6 A A 575 -6.171 91.228 115.251 1.00 57.79 C
ATOM 19 N6 A A 575 -6.313 92.218 116.138 1.00 58.20 N
ATOM 20 N1 A A 575 -4.922 90.834 114.917 1.00 55.97 N
ATOM 21 C2 A A 575 -4.782 89.838 114.032 1.00 57.59 C
ATOM 22 N3 A A 575 -5.720 89.137 113.391 1.00 57.38 N
ATOM 23 C4 A A 575 -6.950 89.557 113.741 1.00 58.52 C
ATOM 24 P G A 576 -8.975 84.291 109.808 1.00 64.01 P
ATOM 25 OP1 G A 576 -10.434 84.072 109.950 1.00 68.80 O
ATOM 26 OP2 G A 576 -8.035 83.206 110.177 1.00 65.51 O
ATOM 27 O5' G A 576 -8.728 84.707 108.288 1.00 64.88 O
TER
ATOM 1 O3' A B 557 -2.368 94.567 117.626 1.00 57.86 O
ATOM 2 P C B 558 -3.276 94.091 118.859 1.00 59.56 P
ATOM 3 OP1 C B 558 -2.364 93.543 119.900 1.00 60.57 O
ATOM 4 OP2 C B 558 -4.375 93.238 118.323 1.00 59.76 O
ATOM 5 O5' C B 558 -3.897 95.457 119.383 1.00 58.01 O
ATOM 6 C5' C B 558 -3.055 96.591 119.616 1.00 59.42 C
ATOM 7 C4' C B 558 -3.885 97.841 119.715 1.00 62.17 C
ATOM 8 O4' C B 558 -4.651 97.990 118.492 1.00 62.36 O
ATOM 9 C3' C B 558 -4.939 97.830 120.808 1.00 63.75 C
ATOM 10 O3' C B 558 -4.390 98.196 122.069 1.00 67.18 O
ATOM 11 C2' C B 558 -5.938 98.852 120.291 1.00 63.03 C
ATOM 12 O2' C B 558 -5.486 100.176 120.484 1.00 62.95 O
ATOM 13 C1' C B 558 -5.929 98.532 118.795 1.00 62.56 C
ATOM 14 N1 C B 558 -6.962 97.550 118.397 1.00 61.82 N
ATOM 15 C2 C B 558 -8.297 97.968 118.306 1.00 61.45 C
ATOM 16 O2 C B 558 -8.582 99.147 118.575 1.00 64.07 O
ATOM 17 N3 C B 558 -9.244 97.079 117.933 1.00 60.28 N
ATOM 18 C4 C B 558 -8.907 95.818 117.662 1.00 59.95 C
ATOM 19 N4 C B 558 -9.879 94.974 117.308 1.00 59.15 N
ATOM 20 C5 C B 558 -7.559 95.364 117.746 1.00 61.27 C
ATOM 21 C6 C B 558 -6.628 96.254 118.117 1.00 61.67 C
ATOM 22 P C B 559 -4.693 97.288 123.364 1.00 69.09 P
ATOM 23 OP1 C B 559 -4.057 97.956 124.529 1.00 68.49 O
ATOM 24 OP2 C B 559 -4.364 95.869 123.053 1.00 66.84 O
ATOM 25 O5' C B 559 -6.269 97.394 123.540 1.00 69.96 O
TER
ATOM 2 P A A 575 -12.963 88.835 113.095 1.00 66.22 P
ATOM 3 OP1 A A 575 -12.451 90.222 113.256 1.00 66.43 O
ATOM 4 OP2 A A 575 -14.152 88.585 112.240 1.00 67.01 O
ATOM 5 O5' A A 575 -11.797 87.900 112.547 1.00 65.20 O
ATOM 6 C5' A A 575 -11.574 87.757 111.126 1.00 64.12 C
ATOM 7 C4' A A 575 -10.124 87.433 110.848 1.00 62.02 C
ATOM 8 O4' A A 575 -9.296 88.532 111.319 1.00 60.85 O
ATOM 9 C3' A A 575 -9.574 86.180 111.515 1.00 61.34 C
ATOM 10 O3' A A 575 -8.607 85.606 110.650 1.00 61.74 O
ATOM 11 C2' A A 575 -8.913 86.734 112.775 1.00 61.69 C
ATOM 12 O2' A A 575 -7.871 85.914 113.271 1.00 62.37 O
ATOM 13 C1' A A 575 -8.356 88.057 112.258 1.00 60.04 C
ATOM 14 N9 A A 575 -8.158 89.096 113.270 1.00 58.82 N
ATOM 15 C8 A A 575 -9.117 89.830 113.923 1.00 59.01 C
ATOM 16 N7 A A 575 -8.629 90.726 114.747 1.00 58.98 N
ATOM 17 C5 A A 575 -7.254 90.566 114.638 1.00 57.84 C
ATOM 18 C6 A A 575 -6.171 91.228 115.251 1.00 57.79 C
ATOM 19 N6 A A 575 -6.313 92.218 116.138 1.00 58.20 N
ATOM 20 N1 A A 575 -4.922 90.834 114.917 1.00 55.97 N
ATOM 21 C2 A A 575 -4.782 89.838 114.032 1.00 57.59 C
ATOM 22 N3 A A 575 -5.720 89.137 113.391 1.00 57.38 N
ATOM 23 C4 A A 575 -6.950 89.557 113.741 1.00 58.52 C
ATOM 24 P G A 576 -8.975 84.291 109.808 1.00 64.01 P
ATOM 25 OP1 G A 576 -10.434 84.072 109.950 1.00 68.80 O
ATOM 26 OP2 G A 576 -8.035 83.206 110.177 1.00 65.51 O
ATOM 27 O5' G A 576 -8.728 84.707 108.288 1.00 64.88 O
TER
ATOM 1 O3' A B 557 -2.368 94.567 117.626 1.00 57.86 O
ATOM 2 P C B 558 -3.276 94.091 118.859 1.00 59.56 P
ATOM 3 OP1 C B 558 -2.364 93.543 119.900 1.00 60.57 O
ATOM 4 OP2 C B 558 -4.375 93.238 118.323 1.00 59.76 O
ATOM 5 O5' C B 558 -3.897 95.457 119.383 1.00 58.01 O
ATOM 6 C5' C B 558 -3.055 96.591 119.616 1.00 59.42 C
ATOM 7 C4' C B 558 -3.885 97.841 119.715 1.00 62.17 C
ATOM 8 O4' C B 558 -4.651 97.990 118.492 1.00 62.36 O
ATOM 9 C3' C B 558 -4.939 97.830 120.808 1.00 63.75 C
ATOM 10 O3' C B 558 -4.390 98.196 122.069 1.00 67.18 O
ATOM 11 C2' C B 558 -5.938 98.852 120.291 1.00 63.03 C
ATOM 12 O2' C B 558 -5.486 100.176 120.484 1.00 62.95 O
ATOM 13 C1' C B 558 -5.929 98.532 118.795 1.00 62.56 C
ATOM 14 N1 C B 558 -6.962 97.550 118.397 1.00 61.82 N
ATOM 15 C2 C B 558 -8.297 97.968 118.306 1.00 61.45 C
ATOM 16 O2 C B 558 -8.582 99.147 118.575 1.00 64.07 O
ATOM 17 N3 C B 558 -9.244 97.079 117.933 1.00 60.28 N
ATOM 18 C4 C B 558 -8.907 95.818 117.662 1.00 59.95 C
ATOM 19 N4 C B 558 -9.879 94.974 117.308 1.00 59.15 N
ATOM 20 C5 C B 558 -7.559 95.364 117.746 1.00 61.27 C
ATOM 21 C6 C B 558 -6.628 96.254 118.117 1.00 61.67 C
ATOM 22 P C B 559 -4.693 97.288 123.364 1.00 69.09 P
ATOM 23 OP1 C B 559 -4.057 97.956 124.529 1.00 68.49 O
ATOM 24 OP2 C B 559 -4.364 95.869 123.053 1.00 66.84 O
ATOM 25 O5' C B 559 -6.269 97.394 123.540 1.00 69.96 O
TER
Atoms:
OP1: (-12.451,90.222,113.256)
OP2: (-14.152,88.585,112.240)
C3': (-9.574,86.180,111.515)
C1': (-8.356,88.057,112.258)
C5': (-11.574,87.757,111.126)
O4': (-9.296,88.532,111.319)
C8: (-9.117,89.830,113.923)
O2': (-7.871,85.914,113.271)
C6: (-6.171,91.228,115.251)
C5: (-7.254,90.566,114.638)
C4: (-6.950,89.557,113.741)
P: (-12.963,88.835,113.095)
C4': (-10.124,87.433,110.848)
C2': (-8.913,86.734,112.775)
C2: (-4.782,89.838,114.032)
N1: (-4.922,90.834,114.917)
N3: (-5.720,89.137,113.391)
N6: (-6.313,92.218,116.138)
N7: (-8.629,90.726,114.747)
N9: (-8.158,89.096,113.270)
O5': (-11.797,87.900,112.547)
O3': (-8.607,85.606,110.650)
OP2: (-14.152,88.585,112.240)
C3': (-9.574,86.180,111.515)
C1': (-8.356,88.057,112.258)
C5': (-11.574,87.757,111.126)
O4': (-9.296,88.532,111.319)
C8: (-9.117,89.830,113.923)
O2': (-7.871,85.914,113.271)
C6: (-6.171,91.228,115.251)
C5: (-7.254,90.566,114.638)
C4: (-6.950,89.557,113.741)
P: (-12.963,88.835,113.095)
C4': (-10.124,87.433,110.848)
C2': (-8.913,86.734,112.775)
C2: (-4.782,89.838,114.032)
N1: (-4.922,90.834,114.917)
N3: (-5.720,89.137,113.391)
N6: (-6.313,92.218,116.138)
N7: (-8.629,90.726,114.747)
N9: (-8.158,89.096,113.270)
O5': (-11.797,87.900,112.547)
O3': (-8.607,85.606,110.650)
C2: (-8.297,97.968,118.306)
OP1: (-2.364,93.543,119.900)
OP2: (-4.375,93.238,118.323)
C4: (-8.907,95.818,117.662)
O5': (-3.897,95.457,119.383)
C3': (-4.939,97.830,120.808)
C1': (-5.929,98.532,118.795)
O4': (-4.651,97.990,118.492)
C5': (-3.055,96.591,119.616)
P: (-3.276,94.091,118.859)
O2: (-8.582,99.147,118.575)
C4': (-3.885,97.841,119.715)
C2': (-5.938,98.852,120.291)
O2': (-5.486,100.176,120.484)
N1: (-6.962,97.550,118.397)
N3: (-9.244,97.079,117.933)
N4: (-9.879,94.974,117.308)
C6: (-6.628,96.254,118.117)
C5: (-7.559,95.364,117.746)
O3': (-4.390,98.196,122.069)
OP1: (-2.364,93.543,119.900)
OP2: (-4.375,93.238,118.323)
C4: (-8.907,95.818,117.662)
O5': (-3.897,95.457,119.383)
C3': (-4.939,97.830,120.808)
C1': (-5.929,98.532,118.795)
O4': (-4.651,97.990,118.492)
C5': (-3.055,96.591,119.616)
P: (-3.276,94.091,118.859)
O2: (-8.582,99.147,118.575)
C4': (-3.885,97.841,119.715)
C2': (-5.938,98.852,120.291)
O2': (-5.486,100.176,120.484)
N1: (-6.962,97.550,118.397)
N3: (-9.244,97.079,117.933)
N4: (-9.879,94.974,117.308)
C6: (-6.628,96.254,118.117)
C5: (-7.559,95.364,117.746)
O3': (-4.390,98.196,122.069)
Image (generated by PyMOL):