Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.434 102.801 105.892 1.00 64.09 O
ATOM 2 P G A 580 -6.385 103.289 104.364 1.00 64.44 P
ATOM 3 OP1 G A 580 -6.067 104.739 104.385 1.00 62.61 O
ATOM 4 OP2 G A 580 -7.613 102.811 103.672 1.00 63.54 O
ATOM 5 O5' G A 580 -5.167 102.476 103.736 1.00 63.30 O
ATOM 6 C5' G A 580 -3.806 102.752 104.113 1.00 61.80 C
ATOM 7 C4' G A 580 -2.877 101.760 103.455 1.00 60.74 C
ATOM 8 O4' G A 580 -3.189 100.425 103.929 1.00 61.18 O
ATOM 9 C3' G A 580 -2.997 101.651 101.945 1.00 60.11 C
ATOM 10 O3' G A 580 -2.213 102.634 101.291 1.00 59.65 O
ATOM 11 C2' G A 580 -2.440 100.259 101.680 1.00 60.51 C
ATOM 12 O2' G A 580 -1.032 100.218 101.704 1.00 60.78 O
ATOM 13 C1' G A 580 -2.968 99.486 102.889 1.00 60.92 C
ATOM 14 N9 G A 580 -4.230 98.818 102.600 1.00 61.40 N
ATOM 15 C8 G A 580 -5.496 99.302 102.833 1.00 62.15 C
ATOM 16 N7 G A 580 -6.435 98.485 102.442 1.00 62.51 N
ATOM 17 C5 G A 580 -5.749 97.394 101.930 1.00 61.89 C
ATOM 18 C6 G A 580 -6.234 96.201 101.362 1.00 61.77 C
ATOM 19 O6 G A 580 -7.408 95.843 101.212 1.00 61.84 O
ATOM 20 N1 G A 580 -5.196 95.373 100.951 1.00 62.31 N
ATOM 21 C2 G A 580 -3.860 95.656 101.087 1.00 62.55 C
ATOM 22 N2 G A 580 -3.012 94.729 100.630 1.00 63.21 N
ATOM 23 N3 G A 580 -3.394 96.764 101.630 1.00 62.35 N
ATOM 24 C4 G A 580 -4.387 97.584 102.023 1.00 61.83 C
ATOM 25 P A A 581 -2.867 104.042 100.877 1.00 59.86 P
ATOM 26 OP1 A A 581 -2.733 104.941 102.051 1.00 59.76 O
ATOM 27 OP2 A A 581 -4.201 103.828 100.271 1.00 60.19 O
ATOM 28 O5' A A 581 -1.899 104.574 99.729 1.00 59.76 O
TER
ATOM 1 O3' G B 580 -2.213 102.634 101.291 1.00 59.65 O
ATOM 2 P A B 581 -2.867 104.042 100.877 1.00 59.86 P
ATOM 3 OP1 A B 581 -2.733 104.941 102.051 1.00 59.76 O
ATOM 4 OP2 A B 581 -4.201 103.828 100.271 1.00 60.19 O
ATOM 5 O5' A B 581 -1.899 104.574 99.729 1.00 59.76 O
ATOM 6 C5' A B 581 -0.545 104.970 100.019 1.00 58.80 C
ATOM 7 C4' A B 581 0.364 104.607 98.868 1.00 58.77 C
ATOM 8 O4' A B 581 0.484 103.166 98.778 1.00 59.76 O
ATOM 9 C3' A B 581 -0.114 105.024 97.491 1.00 58.31 C
ATOM 10 O3' A B 581 0.212 106.371 97.212 1.00 56.86 O
ATOM 11 C2' A B 581 0.636 104.062 96.588 1.00 59.73 C
ATOM 12 O2' A B 581 1.976 104.460 96.404 1.00 60.17 O
ATOM 13 C1' A B 581 0.593 102.780 97.421 1.00 60.95 C
ATOM 14 N9 A B 581 -0.557 101.935 97.107 1.00 63.36 N
ATOM 15 C8 A B 581 -1.628 101.652 97.914 1.00 64.12 C
ATOM 16 N7 A B 581 -2.523 100.880 97.352 1.00 65.24 N
ATOM 17 C5 A B 581 -2.007 100.635 96.091 1.00 65.49 C
ATOM 18 C6 A B 581 -2.487 99.887 95.005 1.00 66.38 C
ATOM 19 N6 A B 581 -3.647 99.227 95.015 1.00 67.18 N
ATOM 20 N1 A B 581 -1.726 99.840 93.890 1.00 66.64 N
ATOM 21 C2 A B 581 -0.562 100.504 93.881 1.00 66.81 C
ATOM 22 N3 A B 581 -0.005 101.244 94.840 1.00 66.19 N
ATOM 23 C4 A B 581 -0.790 101.270 95.930 1.00 65.05 C
ATOM 24 P C B 582 -0.842 107.288 96.432 1.00 55.95 P
ATOM 25 OP1 C B 582 -0.250 108.630 96.249 1.00 56.73 O
ATOM 26 OP2 C B 582 -2.137 107.162 97.127 1.00 58.20 O
ATOM 27 O5' C B 582 -0.978 106.580 95.013 1.00 55.84 O
TER
ATOM 2 P G A 580 -6.385 103.289 104.364 1.00 64.44 P
ATOM 3 OP1 G A 580 -6.067 104.739 104.385 1.00 62.61 O
ATOM 4 OP2 G A 580 -7.613 102.811 103.672 1.00 63.54 O
ATOM 5 O5' G A 580 -5.167 102.476 103.736 1.00 63.30 O
ATOM 6 C5' G A 580 -3.806 102.752 104.113 1.00 61.80 C
ATOM 7 C4' G A 580 -2.877 101.760 103.455 1.00 60.74 C
ATOM 8 O4' G A 580 -3.189 100.425 103.929 1.00 61.18 O
ATOM 9 C3' G A 580 -2.997 101.651 101.945 1.00 60.11 C
ATOM 10 O3' G A 580 -2.213 102.634 101.291 1.00 59.65 O
ATOM 11 C2' G A 580 -2.440 100.259 101.680 1.00 60.51 C
ATOM 12 O2' G A 580 -1.032 100.218 101.704 1.00 60.78 O
ATOM 13 C1' G A 580 -2.968 99.486 102.889 1.00 60.92 C
ATOM 14 N9 G A 580 -4.230 98.818 102.600 1.00 61.40 N
ATOM 15 C8 G A 580 -5.496 99.302 102.833 1.00 62.15 C
ATOM 16 N7 G A 580 -6.435 98.485 102.442 1.00 62.51 N
ATOM 17 C5 G A 580 -5.749 97.394 101.930 1.00 61.89 C
ATOM 18 C6 G A 580 -6.234 96.201 101.362 1.00 61.77 C
ATOM 19 O6 G A 580 -7.408 95.843 101.212 1.00 61.84 O
ATOM 20 N1 G A 580 -5.196 95.373 100.951 1.00 62.31 N
ATOM 21 C2 G A 580 -3.860 95.656 101.087 1.00 62.55 C
ATOM 22 N2 G A 580 -3.012 94.729 100.630 1.00 63.21 N
ATOM 23 N3 G A 580 -3.394 96.764 101.630 1.00 62.35 N
ATOM 24 C4 G A 580 -4.387 97.584 102.023 1.00 61.83 C
ATOM 25 P A A 581 -2.867 104.042 100.877 1.00 59.86 P
ATOM 26 OP1 A A 581 -2.733 104.941 102.051 1.00 59.76 O
ATOM 27 OP2 A A 581 -4.201 103.828 100.271 1.00 60.19 O
ATOM 28 O5' A A 581 -1.899 104.574 99.729 1.00 59.76 O
TER
ATOM 1 O3' G B 580 -2.213 102.634 101.291 1.00 59.65 O
ATOM 2 P A B 581 -2.867 104.042 100.877 1.00 59.86 P
ATOM 3 OP1 A B 581 -2.733 104.941 102.051 1.00 59.76 O
ATOM 4 OP2 A B 581 -4.201 103.828 100.271 1.00 60.19 O
ATOM 5 O5' A B 581 -1.899 104.574 99.729 1.00 59.76 O
ATOM 6 C5' A B 581 -0.545 104.970 100.019 1.00 58.80 C
ATOM 7 C4' A B 581 0.364 104.607 98.868 1.00 58.77 C
ATOM 8 O4' A B 581 0.484 103.166 98.778 1.00 59.76 O
ATOM 9 C3' A B 581 -0.114 105.024 97.491 1.00 58.31 C
ATOM 10 O3' A B 581 0.212 106.371 97.212 1.00 56.86 O
ATOM 11 C2' A B 581 0.636 104.062 96.588 1.00 59.73 C
ATOM 12 O2' A B 581 1.976 104.460 96.404 1.00 60.17 O
ATOM 13 C1' A B 581 0.593 102.780 97.421 1.00 60.95 C
ATOM 14 N9 A B 581 -0.557 101.935 97.107 1.00 63.36 N
ATOM 15 C8 A B 581 -1.628 101.652 97.914 1.00 64.12 C
ATOM 16 N7 A B 581 -2.523 100.880 97.352 1.00 65.24 N
ATOM 17 C5 A B 581 -2.007 100.635 96.091 1.00 65.49 C
ATOM 18 C6 A B 581 -2.487 99.887 95.005 1.00 66.38 C
ATOM 19 N6 A B 581 -3.647 99.227 95.015 1.00 67.18 N
ATOM 20 N1 A B 581 -1.726 99.840 93.890 1.00 66.64 N
ATOM 21 C2 A B 581 -0.562 100.504 93.881 1.00 66.81 C
ATOM 22 N3 A B 581 -0.005 101.244 94.840 1.00 66.19 N
ATOM 23 C4 A B 581 -0.790 101.270 95.930 1.00 65.05 C
ATOM 24 P C B 582 -0.842 107.288 96.432 1.00 55.95 P
ATOM 25 OP1 C B 582 -0.250 108.630 96.249 1.00 56.73 O
ATOM 26 OP2 C B 582 -2.137 107.162 97.127 1.00 58.20 O
ATOM 27 O5' C B 582 -0.978 106.580 95.013 1.00 55.84 O
TER
Atoms:
OP1: (-6.067,104.739,104.385)
OP2: (-7.613,102.811,103.672)
C3': (-2.997,101.651,101.945)
C1': (-2.968,99.486,102.889)
C5': (-3.806,102.752,104.113)
O6: (-7.408,95.843,101.212)
O4': (-3.189,100.425,103.929)
C8: (-5.496,99.302,102.833)
C2: (-3.860,95.656,101.087)
C6: (-6.234,96.201,101.362)
C5: (-5.749,97.394,101.930)
C4: (-4.387,97.584,102.023)
P: (-6.385,103.289,104.364)
C4': (-2.877,101.760,103.455)
C2': (-2.440,100.259,101.680)
O2': (-1.032,100.218,101.704)
N1: (-5.196,95.373,100.951)
N2: (-3.012,94.729,100.630)
N3: (-3.394,96.764,101.630)
N7: (-6.435,98.485,102.442)
N9: (-4.230,98.818,102.600)
O5': (-5.167,102.476,103.736)
O3': (-2.213,102.634,101.291)
OP2: (-7.613,102.811,103.672)
C3': (-2.997,101.651,101.945)
C1': (-2.968,99.486,102.889)
C5': (-3.806,102.752,104.113)
O6: (-7.408,95.843,101.212)
O4': (-3.189,100.425,103.929)
C8: (-5.496,99.302,102.833)
C2: (-3.860,95.656,101.087)
C6: (-6.234,96.201,101.362)
C5: (-5.749,97.394,101.930)
C4: (-4.387,97.584,102.023)
P: (-6.385,103.289,104.364)
C4': (-2.877,101.760,103.455)
C2': (-2.440,100.259,101.680)
O2': (-1.032,100.218,101.704)
N1: (-5.196,95.373,100.951)
N2: (-3.012,94.729,100.630)
N3: (-3.394,96.764,101.630)
N7: (-6.435,98.485,102.442)
N9: (-4.230,98.818,102.600)
O5': (-5.167,102.476,103.736)
O3': (-2.213,102.634,101.291)
OP1: (-2.733,104.941,102.051)
OP2: (-4.201,103.828,100.271)
C3': (-0.114,105.024,97.491)
C1': (0.593,102.780,97.421)
C5': (-0.545,104.970,100.019)
O4': (0.484,103.166,98.778)
C8: (-1.628,101.652,97.914)
O2': (1.976,104.460,96.404)
C6: (-2.487,99.887,95.005)
C5: (-2.007,100.635,96.091)
C4: (-0.790,101.270,95.930)
P: (-2.867,104.042,100.877)
C4': (0.364,104.607,98.868)
C2': (0.636,104.062,96.588)
C2: (-0.562,100.504,93.881)
N1: (-1.726,99.840,93.890)
N3: (-0.005,101.244,94.840)
N6: (-3.647,99.227,95.015)
N7: (-2.523,100.880,97.352)
N9: (-0.557,101.935,97.107)
O5': (-1.899,104.574,99.729)
O3': (0.212,106.371,97.212)
OP2: (-4.201,103.828,100.271)
C3': (-0.114,105.024,97.491)
C1': (0.593,102.780,97.421)
C5': (-0.545,104.970,100.019)
O4': (0.484,103.166,98.778)
C8: (-1.628,101.652,97.914)
O2': (1.976,104.460,96.404)
C6: (-2.487,99.887,95.005)
C5: (-2.007,100.635,96.091)
C4: (-0.790,101.270,95.930)
P: (-2.867,104.042,100.877)
C4': (0.364,104.607,98.868)
C2': (0.636,104.062,96.588)
C2: (-0.562,100.504,93.881)
N1: (-1.726,99.840,93.890)
N3: (-0.005,101.244,94.840)
N6: (-3.647,99.227,95.015)
N7: (-2.523,100.880,97.352)
N9: (-0.557,101.935,97.107)
O5': (-1.899,104.574,99.729)
O3': (0.212,106.371,97.212)
Image (generated by PyMOL):