Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A140:A60
Extra
PDB:
ATOM 1 O3' A A 139 9.497 38.041 20.461 1.00 17.09 O
ATOM 2 P A A 140 8.381 37.321 21.397 1.00 16.93 P
ATOM 3 OP1 A A 140 7.684 38.328 22.220 1.00 17.14 O
ATOM 4 OP2 A A 140 9.143 36.281 22.077 1.00 17.22 O
ATOM 5 O5' A A 140 7.386 36.772 20.283 1.00 17.60 O
ATOM 6 C5' A A 140 7.176 35.393 20.014 1.00 15.78 C
ATOM 7 C4' A A 140 6.974 35.210 18.531 1.00 13.36 C
ATOM 8 O4' A A 140 5.953 36.140 18.101 1.00 15.68 O
ATOM 9 C3' A A 140 8.192 35.550 17.689 1.00 14.63 C
ATOM 10 O3' A A 140 9.006 34.404 17.532 1.00 17.12 O
ATOM 11 C2' A A 140 7.577 36.009 16.371 1.00 15.50 C
ATOM 12 O2' A A 140 7.171 34.855 15.652 1.00 19.15 O
ATOM 13 C1' A A 140 6.283 36.680 16.845 1.00 15.51 C
ATOM 14 N9 A A 140 6.302 38.141 17.011 1.00 17.17 N
ATOM 15 C8 A A 140 6.809 38.888 18.040 1.00 16.68 C
ATOM 16 N7 A A 140 6.597 40.178 17.899 1.00 17.52 N
ATOM 17 C5 A A 140 5.895 40.268 16.697 1.00 18.25 C
ATOM 18 C6 A A 140 5.372 41.366 15.988 1.00 20.39 C
ATOM 19 N6 A A 140 5.498 42.619 16.410 1.00 18.92 N
ATOM 20 N1 A A 140 4.731 41.143 14.823 1.00 18.63 N
ATOM 21 C2 A A 140 4.621 39.860 14.422 1.00 20.67 C
ATOM 22 N3 A A 140 5.060 38.738 15.007 1.00 17.78 N
ATOM 23 C4 A A 140 5.702 39.026 16.151 1.00 16.85 C
ATOM 24 P A A 141 10.539 34.300 17.997 1.00 15.75 P
ATOM 25 OP1 A A 141 10.697 34.773 19.407 1.00 16.63 O
ATOM 26 OP2 A A 141 11.299 35.062 16.966 1.00 15.76 O
ATOM 27 O5' A A 141 10.807 32.757 17.914 1.00 17.94 O
TER
ATOM 1 O3' A B 59 3.408 44.629 14.909 1.00 18.34 O
ATOM 2 P C B 60 4.044 45.955 15.593 1.00 20.88 P
ATOM 3 OP1 C B 60 5.430 45.557 15.950 1.00 22.12 O
ATOM 4 OP2 C B 60 3.098 46.451 16.607 1.00 23.79 O
ATOM 5 O5' C B 60 4.080 46.938 14.359 1.00 22.34 O
ATOM 6 C5' C B 60 4.911 46.658 13.246 1.00 22.37 C
ATOM 7 C4' C B 60 4.264 47.160 11.985 1.00 24.58 C
ATOM 8 O4' C B 60 2.930 46.598 11.885 1.00 21.40 O
ATOM 9 C3' C B 60 4.017 48.657 11.920 1.00 22.86 C
ATOM 10 O3' C B 60 5.180 49.397 11.582 1.00 29.53 O
ATOM 11 C2' C B 60 2.930 48.738 10.867 1.00 25.78 C
ATOM 12 O2' C B 60 3.501 48.538 9.584 1.00 24.27 O
ATOM 13 C1' C B 60 2.083 47.520 11.231 1.00 24.16 C
ATOM 14 N1 C B 60 0.985 47.914 12.130 1.00 22.50 N
ATOM 15 C2 C B 60 -0.131 48.509 11.548 1.00 25.45 C
ATOM 16 O2 C B 60 -0.149 48.674 10.326 1.00 26.20 O
ATOM 17 N3 C B 60 -1.162 48.909 12.314 1.00 24.69 N
ATOM 18 C4 C B 60 -1.124 48.735 13.628 1.00 25.77 C
ATOM 19 N4 C B 60 -2.190 49.161 14.328 1.00 23.99 N
ATOM 20 C5 C B 60 0.009 48.131 14.266 1.00 23.43 C
ATOM 21 C6 C B 60 1.036 47.744 13.488 1.00 21.83 C
ATOM 22 P G B 61 5.324 50.927 12.077 1.00 27.31 P
ATOM 23 OP1 G B 61 6.678 51.284 11.587 1.00 27.95 O
ATOM 24 OP2 G B 61 5.008 50.975 13.519 1.00 27.79 O
ATOM 25 O5' G B 61 4.178 51.707 11.278 1.00 25.05 O
TER
ATOM 2 P A A 140 8.381 37.321 21.397 1.00 16.93 P
ATOM 3 OP1 A A 140 7.684 38.328 22.220 1.00 17.14 O
ATOM 4 OP2 A A 140 9.143 36.281 22.077 1.00 17.22 O
ATOM 5 O5' A A 140 7.386 36.772 20.283 1.00 17.60 O
ATOM 6 C5' A A 140 7.176 35.393 20.014 1.00 15.78 C
ATOM 7 C4' A A 140 6.974 35.210 18.531 1.00 13.36 C
ATOM 8 O4' A A 140 5.953 36.140 18.101 1.00 15.68 O
ATOM 9 C3' A A 140 8.192 35.550 17.689 1.00 14.63 C
ATOM 10 O3' A A 140 9.006 34.404 17.532 1.00 17.12 O
ATOM 11 C2' A A 140 7.577 36.009 16.371 1.00 15.50 C
ATOM 12 O2' A A 140 7.171 34.855 15.652 1.00 19.15 O
ATOM 13 C1' A A 140 6.283 36.680 16.845 1.00 15.51 C
ATOM 14 N9 A A 140 6.302 38.141 17.011 1.00 17.17 N
ATOM 15 C8 A A 140 6.809 38.888 18.040 1.00 16.68 C
ATOM 16 N7 A A 140 6.597 40.178 17.899 1.00 17.52 N
ATOM 17 C5 A A 140 5.895 40.268 16.697 1.00 18.25 C
ATOM 18 C6 A A 140 5.372 41.366 15.988 1.00 20.39 C
ATOM 19 N6 A A 140 5.498 42.619 16.410 1.00 18.92 N
ATOM 20 N1 A A 140 4.731 41.143 14.823 1.00 18.63 N
ATOM 21 C2 A A 140 4.621 39.860 14.422 1.00 20.67 C
ATOM 22 N3 A A 140 5.060 38.738 15.007 1.00 17.78 N
ATOM 23 C4 A A 140 5.702 39.026 16.151 1.00 16.85 C
ATOM 24 P A A 141 10.539 34.300 17.997 1.00 15.75 P
ATOM 25 OP1 A A 141 10.697 34.773 19.407 1.00 16.63 O
ATOM 26 OP2 A A 141 11.299 35.062 16.966 1.00 15.76 O
ATOM 27 O5' A A 141 10.807 32.757 17.914 1.00 17.94 O
TER
ATOM 1 O3' A B 59 3.408 44.629 14.909 1.00 18.34 O
ATOM 2 P C B 60 4.044 45.955 15.593 1.00 20.88 P
ATOM 3 OP1 C B 60 5.430 45.557 15.950 1.00 22.12 O
ATOM 4 OP2 C B 60 3.098 46.451 16.607 1.00 23.79 O
ATOM 5 O5' C B 60 4.080 46.938 14.359 1.00 22.34 O
ATOM 6 C5' C B 60 4.911 46.658 13.246 1.00 22.37 C
ATOM 7 C4' C B 60 4.264 47.160 11.985 1.00 24.58 C
ATOM 8 O4' C B 60 2.930 46.598 11.885 1.00 21.40 O
ATOM 9 C3' C B 60 4.017 48.657 11.920 1.00 22.86 C
ATOM 10 O3' C B 60 5.180 49.397 11.582 1.00 29.53 O
ATOM 11 C2' C B 60 2.930 48.738 10.867 1.00 25.78 C
ATOM 12 O2' C B 60 3.501 48.538 9.584 1.00 24.27 O
ATOM 13 C1' C B 60 2.083 47.520 11.231 1.00 24.16 C
ATOM 14 N1 C B 60 0.985 47.914 12.130 1.00 22.50 N
ATOM 15 C2 C B 60 -0.131 48.509 11.548 1.00 25.45 C
ATOM 16 O2 C B 60 -0.149 48.674 10.326 1.00 26.20 O
ATOM 17 N3 C B 60 -1.162 48.909 12.314 1.00 24.69 N
ATOM 18 C4 C B 60 -1.124 48.735 13.628 1.00 25.77 C
ATOM 19 N4 C B 60 -2.190 49.161 14.328 1.00 23.99 N
ATOM 20 C5 C B 60 0.009 48.131 14.266 1.00 23.43 C
ATOM 21 C6 C B 60 1.036 47.744 13.488 1.00 21.83 C
ATOM 22 P G B 61 5.324 50.927 12.077 1.00 27.31 P
ATOM 23 OP1 G B 61 6.678 51.284 11.587 1.00 27.95 O
ATOM 24 OP2 G B 61 5.008 50.975 13.519 1.00 27.79 O
ATOM 25 O5' G B 61 4.178 51.707 11.278 1.00 25.05 O
TER
Atoms:
OP1: (7.684,38.328,22.220)
OP2: (9.143,36.281,22.077)
C3': (8.192,35.550,17.689)
C1': (6.283,36.680,16.845)
C5': (7.176,35.393,20.014)
O4': (5.953,36.140,18.101)
C8: (6.809,38.888,18.040)
O2': (7.171,34.855,15.652)
C6: (5.372,41.366,15.988)
C5: (5.895,40.268,16.697)
C4: (5.702,39.026,16.151)
P: (8.381,37.321,21.397)
C4': (6.974,35.210,18.531)
C2': (7.577,36.009,16.371)
C2: (4.621,39.860,14.422)
N1: (4.731,41.143,14.823)
N3: (5.060,38.738,15.007)
N6: (5.498,42.619,16.410)
N7: (6.597,40.178,17.899)
N9: (6.302,38.141,17.011)
O5': (7.386,36.772,20.283)
O3': (9.006,34.404,17.532)
OP2: (9.143,36.281,22.077)
C3': (8.192,35.550,17.689)
C1': (6.283,36.680,16.845)
C5': (7.176,35.393,20.014)
O4': (5.953,36.140,18.101)
C8: (6.809,38.888,18.040)
O2': (7.171,34.855,15.652)
C6: (5.372,41.366,15.988)
C5: (5.895,40.268,16.697)
C4: (5.702,39.026,16.151)
P: (8.381,37.321,21.397)
C4': (6.974,35.210,18.531)
C2': (7.577,36.009,16.371)
C2: (4.621,39.860,14.422)
N1: (4.731,41.143,14.823)
N3: (5.060,38.738,15.007)
N6: (5.498,42.619,16.410)
N7: (6.597,40.178,17.899)
N9: (6.302,38.141,17.011)
O5': (7.386,36.772,20.283)
O3': (9.006,34.404,17.532)
C2: (-0.131,48.509,11.548)
OP1: (5.430,45.557,15.950)
OP2: (3.098,46.451,16.607)
C4: (-1.124,48.735,13.628)
O5': (4.080,46.938,14.359)
C3': (4.017,48.657,11.920)
C1': (2.083,47.520,11.231)
O4': (2.930,46.598,11.885)
C5': (4.911,46.658,13.246)
P: (4.044,45.955,15.593)
O2: (-0.149,48.674,10.326)
C4': (4.264,47.160,11.985)
C2': (2.930,48.738,10.867)
O2': (3.501,48.538,9.584)
N1: (0.985,47.914,12.130)
N3: (-1.162,48.909,12.314)
N4: (-2.190,49.161,14.328)
C6: (1.036,47.744,13.488)
C5: (0.009,48.131,14.266)
O3': (5.180,49.397,11.582)
OP1: (5.430,45.557,15.950)
OP2: (3.098,46.451,16.607)
C4: (-1.124,48.735,13.628)
O5': (4.080,46.938,14.359)
C3': (4.017,48.657,11.920)
C1': (2.083,47.520,11.231)
O4': (2.930,46.598,11.885)
C5': (4.911,46.658,13.246)
P: (4.044,45.955,15.593)
O2: (-0.149,48.674,10.326)
C4': (4.264,47.160,11.985)
C2': (2.930,48.738,10.867)
O2': (3.501,48.538,9.584)
N1: (0.985,47.914,12.130)
N3: (-1.162,48.909,12.314)
N4: (-2.190,49.161,14.328)
C6: (1.036,47.744,13.488)
C5: (0.009,48.131,14.266)
O3': (5.180,49.397,11.582)
Image (generated by PyMOL):