Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.535 103.219 106.153 1.00 74.73 O
ATOM 2 P G A 580 -6.421 103.684 104.624 1.00 74.99 P
ATOM 3 OP1 G A 580 -6.065 105.120 104.680 1.00 75.77 O
ATOM 4 OP2 G A 580 -7.626 103.249 103.868 1.00 73.77 O
ATOM 5 O5' G A 580 -5.192 102.846 104.053 1.00 74.92 O
ATOM 6 C5' G A 580 -3.835 103.169 104.408 1.00 74.05 C
ATOM 7 C4' G A 580 -2.893 102.172 103.785 1.00 73.76 C
ATOM 8 O4' G A 580 -3.237 100.851 104.270 1.00 74.36 O
ATOM 9 C3' G A 580 -2.990 102.038 102.274 1.00 73.44 C
ATOM 10 O3' G A 580 -2.196 103.002 101.614 1.00 71.71 O
ATOM 11 C2' G A 580 -2.449 100.639 102.032 1.00 74.34 C
ATOM 12 O2' G A 580 -1.038 100.578 102.038 1.00 75.83 O
ATOM 13 C1' G A 580 -2.996 99.895 103.250 1.00 74.75 C
ATOM 14 N9 G A 580 -4.243 99.203 102.950 1.00 73.74 N
ATOM 15 C8 G A 580 -5.523 99.640 103.186 1.00 73.27 C
ATOM 16 N7 G A 580 -6.429 98.794 102.785 1.00 73.67 N
ATOM 17 C5 G A 580 -5.701 97.735 102.262 1.00 73.12 C
ATOM 18 C6 G A 580 -6.135 96.520 101.685 1.00 73.67 C
ATOM 19 O6 G A 580 -7.293 96.106 101.530 1.00 74.39 O
ATOM 20 N1 G A 580 -5.061 95.743 101.271 1.00 73.17 N
ATOM 21 C2 G A 580 -3.741 96.083 101.404 1.00 71.94 C
ATOM 22 N2 G A 580 -2.857 95.201 100.928 1.00 72.46 N
ATOM 23 N3 G A 580 -3.324 97.202 101.956 1.00 71.30 N
ATOM 24 C4 G A 580 -4.351 97.976 102.357 1.00 72.54 C
ATOM 25 P A A 581 -2.895 104.275 100.951 1.00 73.30 P
ATOM 26 OP1 A A 581 -2.937 105.338 101.991 1.00 71.88 O
ATOM 27 OP2 A A 581 -4.153 103.824 100.314 1.00 73.13 O
ATOM 28 O5' A A 581 -1.883 104.716 99.803 1.00 71.73 O
TER
ATOM 1 O3' G B 580 -2.196 103.002 101.614 1.00 71.71 O
ATOM 2 P A B 581 -2.895 104.275 100.951 1.00 73.30 P
ATOM 3 OP1 A B 581 -2.937 105.338 101.991 1.00 71.88 O
ATOM 4 OP2 A B 581 -4.153 103.824 100.314 1.00 73.13 O
ATOM 5 O5' A B 581 -1.883 104.716 99.803 1.00 71.73 O
ATOM 6 C5' A B 581 -0.562 105.188 100.115 1.00 69.26 C
ATOM 7 C4' A B 581 0.391 104.807 99.014 1.00 67.33 C
ATOM 8 O4' A B 581 0.420 103.361 98.909 1.00 68.06 O
ATOM 9 C3' A B 581 -0.003 105.270 97.623 1.00 65.52 C
ATOM 10 O3' A B 581 0.407 106.611 97.378 1.00 62.20 O
ATOM 11 C2' A B 581 0.730 104.271 96.741 1.00 67.85 C
ATOM 12 O2' A B 581 2.096 104.579 96.591 1.00 70.23 O
ATOM 13 C1' A B 581 0.585 102.984 97.558 1.00 69.96 C
ATOM 14 N9 A B 581 -0.597 102.235 97.150 1.00 73.58 N
ATOM 15 C8 A B 581 -1.879 102.375 97.615 1.00 75.81 C
ATOM 16 N7 A B 581 -2.752 101.625 96.988 1.00 76.99 N
ATOM 17 C5 A B 581 -1.989 100.931 96.062 1.00 76.76 C
ATOM 18 C6 A B 581 -2.326 99.993 95.074 1.00 77.40 C
ATOM 19 N6 A B 581 -3.575 99.593 94.829 1.00 77.45 N
ATOM 20 N1 A B 581 -1.325 99.480 94.328 1.00 78.49 N
ATOM 21 C2 A B 581 -0.076 99.899 94.560 1.00 79.38 C
ATOM 22 N3 A B 581 0.364 100.790 95.449 1.00 78.46 N
ATOM 23 C4 A B 581 -0.655 101.275 96.173 1.00 76.05 C
ATOM 24 P C B 582 -0.562 107.609 96.573 1.00 60.74 P
ATOM 25 OP1 C B 582 0.156 108.865 96.288 1.00 60.01 O
ATOM 26 OP2 C B 582 -1.850 107.662 97.280 1.00 63.58 O
ATOM 27 O5' C B 582 -0.794 106.869 95.189 1.00 60.57 O
TER
ATOM 2 P G A 580 -6.421 103.684 104.624 1.00 74.99 P
ATOM 3 OP1 G A 580 -6.065 105.120 104.680 1.00 75.77 O
ATOM 4 OP2 G A 580 -7.626 103.249 103.868 1.00 73.77 O
ATOM 5 O5' G A 580 -5.192 102.846 104.053 1.00 74.92 O
ATOM 6 C5' G A 580 -3.835 103.169 104.408 1.00 74.05 C
ATOM 7 C4' G A 580 -2.893 102.172 103.785 1.00 73.76 C
ATOM 8 O4' G A 580 -3.237 100.851 104.270 1.00 74.36 O
ATOM 9 C3' G A 580 -2.990 102.038 102.274 1.00 73.44 C
ATOM 10 O3' G A 580 -2.196 103.002 101.614 1.00 71.71 O
ATOM 11 C2' G A 580 -2.449 100.639 102.032 1.00 74.34 C
ATOM 12 O2' G A 580 -1.038 100.578 102.038 1.00 75.83 O
ATOM 13 C1' G A 580 -2.996 99.895 103.250 1.00 74.75 C
ATOM 14 N9 G A 580 -4.243 99.203 102.950 1.00 73.74 N
ATOM 15 C8 G A 580 -5.523 99.640 103.186 1.00 73.27 C
ATOM 16 N7 G A 580 -6.429 98.794 102.785 1.00 73.67 N
ATOM 17 C5 G A 580 -5.701 97.735 102.262 1.00 73.12 C
ATOM 18 C6 G A 580 -6.135 96.520 101.685 1.00 73.67 C
ATOM 19 O6 G A 580 -7.293 96.106 101.530 1.00 74.39 O
ATOM 20 N1 G A 580 -5.061 95.743 101.271 1.00 73.17 N
ATOM 21 C2 G A 580 -3.741 96.083 101.404 1.00 71.94 C
ATOM 22 N2 G A 580 -2.857 95.201 100.928 1.00 72.46 N
ATOM 23 N3 G A 580 -3.324 97.202 101.956 1.00 71.30 N
ATOM 24 C4 G A 580 -4.351 97.976 102.357 1.00 72.54 C
ATOM 25 P A A 581 -2.895 104.275 100.951 1.00 73.30 P
ATOM 26 OP1 A A 581 -2.937 105.338 101.991 1.00 71.88 O
ATOM 27 OP2 A A 581 -4.153 103.824 100.314 1.00 73.13 O
ATOM 28 O5' A A 581 -1.883 104.716 99.803 1.00 71.73 O
TER
ATOM 1 O3' G B 580 -2.196 103.002 101.614 1.00 71.71 O
ATOM 2 P A B 581 -2.895 104.275 100.951 1.00 73.30 P
ATOM 3 OP1 A B 581 -2.937 105.338 101.991 1.00 71.88 O
ATOM 4 OP2 A B 581 -4.153 103.824 100.314 1.00 73.13 O
ATOM 5 O5' A B 581 -1.883 104.716 99.803 1.00 71.73 O
ATOM 6 C5' A B 581 -0.562 105.188 100.115 1.00 69.26 C
ATOM 7 C4' A B 581 0.391 104.807 99.014 1.00 67.33 C
ATOM 8 O4' A B 581 0.420 103.361 98.909 1.00 68.06 O
ATOM 9 C3' A B 581 -0.003 105.270 97.623 1.00 65.52 C
ATOM 10 O3' A B 581 0.407 106.611 97.378 1.00 62.20 O
ATOM 11 C2' A B 581 0.730 104.271 96.741 1.00 67.85 C
ATOM 12 O2' A B 581 2.096 104.579 96.591 1.00 70.23 O
ATOM 13 C1' A B 581 0.585 102.984 97.558 1.00 69.96 C
ATOM 14 N9 A B 581 -0.597 102.235 97.150 1.00 73.58 N
ATOM 15 C8 A B 581 -1.879 102.375 97.615 1.00 75.81 C
ATOM 16 N7 A B 581 -2.752 101.625 96.988 1.00 76.99 N
ATOM 17 C5 A B 581 -1.989 100.931 96.062 1.00 76.76 C
ATOM 18 C6 A B 581 -2.326 99.993 95.074 1.00 77.40 C
ATOM 19 N6 A B 581 -3.575 99.593 94.829 1.00 77.45 N
ATOM 20 N1 A B 581 -1.325 99.480 94.328 1.00 78.49 N
ATOM 21 C2 A B 581 -0.076 99.899 94.560 1.00 79.38 C
ATOM 22 N3 A B 581 0.364 100.790 95.449 1.00 78.46 N
ATOM 23 C4 A B 581 -0.655 101.275 96.173 1.00 76.05 C
ATOM 24 P C B 582 -0.562 107.609 96.573 1.00 60.74 P
ATOM 25 OP1 C B 582 0.156 108.865 96.288 1.00 60.01 O
ATOM 26 OP2 C B 582 -1.850 107.662 97.280 1.00 63.58 O
ATOM 27 O5' C B 582 -0.794 106.869 95.189 1.00 60.57 O
TER
Atoms:
OP1: (-6.065,105.120,104.680)
OP2: (-7.626,103.249,103.868)
C3': (-2.990,102.038,102.274)
C1': (-2.996,99.895,103.250)
C5': (-3.835,103.169,104.408)
O6: (-7.293,96.106,101.530)
O4': (-3.237,100.851,104.270)
C8: (-5.523,99.640,103.186)
C2: (-3.741,96.083,101.404)
C6: (-6.135,96.520,101.685)
C5: (-5.701,97.735,102.262)
C4: (-4.351,97.976,102.357)
P: (-6.421,103.684,104.624)
C4': (-2.893,102.172,103.785)
C2': (-2.449,100.639,102.032)
O2': (-1.038,100.578,102.038)
N1: (-5.061,95.743,101.271)
N2: (-2.857,95.201,100.928)
N3: (-3.324,97.202,101.956)
N7: (-6.429,98.794,102.785)
N9: (-4.243,99.203,102.950)
O5': (-5.192,102.846,104.053)
O3': (-2.196,103.002,101.614)
OP2: (-7.626,103.249,103.868)
C3': (-2.990,102.038,102.274)
C1': (-2.996,99.895,103.250)
C5': (-3.835,103.169,104.408)
O6: (-7.293,96.106,101.530)
O4': (-3.237,100.851,104.270)
C8: (-5.523,99.640,103.186)
C2: (-3.741,96.083,101.404)
C6: (-6.135,96.520,101.685)
C5: (-5.701,97.735,102.262)
C4: (-4.351,97.976,102.357)
P: (-6.421,103.684,104.624)
C4': (-2.893,102.172,103.785)
C2': (-2.449,100.639,102.032)
O2': (-1.038,100.578,102.038)
N1: (-5.061,95.743,101.271)
N2: (-2.857,95.201,100.928)
N3: (-3.324,97.202,101.956)
N7: (-6.429,98.794,102.785)
N9: (-4.243,99.203,102.950)
O5': (-5.192,102.846,104.053)
O3': (-2.196,103.002,101.614)
OP1: (-2.937,105.338,101.991)
OP2: (-4.153,103.824,100.314)
C3': (-0.003,105.270,97.623)
C1': (0.585,102.984,97.558)
C5': (-0.562,105.188,100.115)
O4': (0.420,103.361,98.909)
C8: (-1.879,102.375,97.615)
O2': (2.096,104.579,96.591)
C6: (-2.326,99.993,95.074)
C5: (-1.989,100.931,96.062)
C4: (-0.655,101.275,96.173)
P: (-2.895,104.275,100.951)
C4': (0.391,104.807,99.014)
C2': (0.730,104.271,96.741)
C2: (-0.076,99.899,94.560)
N1: (-1.325,99.480,94.328)
N3: (0.364,100.790,95.449)
N6: (-3.575,99.593,94.829)
N7: (-2.752,101.625,96.988)
N9: (-0.597,102.235,97.150)
O5': (-1.883,104.716,99.803)
O3': (0.407,106.611,97.378)
OP2: (-4.153,103.824,100.314)
C3': (-0.003,105.270,97.623)
C1': (0.585,102.984,97.558)
C5': (-0.562,105.188,100.115)
O4': (0.420,103.361,98.909)
C8: (-1.879,102.375,97.615)
O2': (2.096,104.579,96.591)
C6: (-2.326,99.993,95.074)
C5: (-1.989,100.931,96.062)
C4: (-0.655,101.275,96.173)
P: (-2.895,104.275,100.951)
C4': (0.391,104.807,99.014)
C2': (0.730,104.271,96.741)
C2: (-0.076,99.899,94.560)
N1: (-1.325,99.480,94.328)
N3: (0.364,100.790,95.449)
N6: (-3.575,99.593,94.829)
N7: (-2.752,101.625,96.988)
N9: (-0.597,102.235,97.150)
O5': (-1.883,104.716,99.803)
O3': (0.407,106.611,97.378)
Image (generated by PyMOL):