Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01082:01197
Extra
PDB:
ATOM 1 O3' U A1081 31.764 103.419 124.797 1.00 44.80 O
ATOM 2 P A A1082 32.324 104.147 123.473 1.00 44.31 P
ATOM 3 OP1 A A1082 32.122 105.613 123.608 1.00 43.02 O
ATOM 4 OP2 A A1082 31.767 103.423 122.298 1.00 43.04 O
ATOM 5 O5' A A1082 33.891 103.882 123.512 1.00 47.82 O
ATOM 6 C5' A A1082 34.418 102.541 123.546 1.00 48.46 C
ATOM 7 C4' A A1082 35.415 102.358 122.432 1.00 48.67 C
ATOM 8 O4' A A1082 36.458 103.363 122.538 1.00 48.19 O
ATOM 9 C3' A A1082 36.123 101.012 122.386 1.00 49.73 C
ATOM 10 O3' A A1082 36.364 100.704 121.013 1.00 52.42 O
ATOM 11 C2' A A1082 37.434 101.304 123.110 1.00 47.68 C
ATOM 12 O2' A A1082 38.468 100.440 122.695 1.00 47.85 O
ATOM 13 C1' A A1082 37.720 102.730 122.641 1.00 48.50 C
ATOM 14 N9 A A1082 38.570 103.554 123.507 1.00 48.15 N
ATOM 15 C8 A A1082 38.923 103.372 124.821 1.00 47.57 C
ATOM 16 N7 A A1082 39.644 104.350 125.313 1.00 47.12 N
ATOM 17 C5 A A1082 39.787 105.227 124.249 1.00 46.79 C
ATOM 18 C6 A A1082 40.423 106.473 124.128 1.00 47.38 C
ATOM 19 N6 A A1082 41.046 107.088 125.136 1.00 47.13 N
ATOM 20 N1 A A1082 40.389 107.081 122.922 1.00 46.74 N
ATOM 21 C2 A A1082 39.753 106.474 121.919 1.00 47.04 C
ATOM 22 N3 A A1082 39.106 105.315 121.912 1.00 47.38 N
ATOM 23 C4 A A1082 39.156 104.736 123.124 1.00 47.56 C
ATOM 24 P A A1083 35.289 99.832 120.189 1.00 52.99 P
ATOM 25 OP1 A A1083 35.627 100.021 118.751 1.00 49.91 O
ATOM 26 OP2 A A1083 33.907 100.138 120.670 1.00 53.14 O
ATOM 27 O5' A A1083 35.592 98.334 120.640 1.00 51.44 O
TER
ATOM 1 O3' U B1196 39.440 111.703 126.564 1.00 48.42 O
ATOM 2 P C B1197 39.899 110.202 126.221 1.00 47.21 P
ATOM 3 OP1 C B1197 40.392 109.619 127.491 1.00 47.35 O
ATOM 4 OP2 C B1197 40.772 110.191 125.023 1.00 47.73 O
ATOM 5 O5' C B1197 38.543 109.461 125.831 1.00 49.72 O
ATOM 6 C5' C B1197 38.013 109.506 124.481 1.00 47.50 C
ATOM 7 C4' C B1197 36.916 108.476 124.329 1.00 46.42 C
ATOM 8 O4' C B1197 36.071 108.538 125.502 1.00 45.91 O
ATOM 9 C3' C B1197 35.985 108.669 123.139 1.00 46.15 C
ATOM 10 O3' C B1197 36.461 107.971 121.979 1.00 45.98 O
ATOM 11 C2' C B1197 34.671 108.064 123.634 1.00 44.63 C
ATOM 12 O2' C B1197 34.599 106.662 123.495 1.00 45.66 O
ATOM 13 C1' C B1197 34.717 108.390 125.127 1.00 43.96 C
ATOM 14 N1 C B1197 33.987 109.607 125.512 1.00 42.20 N
ATOM 15 C2 C B1197 32.617 109.517 125.712 1.00 42.24 C
ATOM 16 O2 C B1197 32.064 108.424 125.549 1.00 43.86 O
ATOM 17 N3 C B1197 31.925 110.617 126.074 1.00 42.34 N
ATOM 18 C4 C B1197 32.561 111.778 126.232 1.00 42.58 C
ATOM 19 N4 C B1197 31.835 112.843 126.597 1.00 43.75 N
ATOM 20 C5 C B1197 33.966 111.901 126.027 1.00 39.87 C
ATOM 21 C6 C B1197 34.632 110.803 125.673 1.00 40.23 C
ATOM 22 P G B1198 37.067 108.783 120.724 1.00 45.82 P
ATOM 23 OP1 G B1198 36.955 107.907 119.529 1.00 46.92 O
ATOM 24 OP2 G B1198 38.402 109.297 121.135 1.00 45.87 O
ATOM 25 O5' G B1198 36.093 110.026 120.514 1.00 44.42 O
TER
ATOM 2 P A A1082 32.324 104.147 123.473 1.00 44.31 P
ATOM 3 OP1 A A1082 32.122 105.613 123.608 1.00 43.02 O
ATOM 4 OP2 A A1082 31.767 103.423 122.298 1.00 43.04 O
ATOM 5 O5' A A1082 33.891 103.882 123.512 1.00 47.82 O
ATOM 6 C5' A A1082 34.418 102.541 123.546 1.00 48.46 C
ATOM 7 C4' A A1082 35.415 102.358 122.432 1.00 48.67 C
ATOM 8 O4' A A1082 36.458 103.363 122.538 1.00 48.19 O
ATOM 9 C3' A A1082 36.123 101.012 122.386 1.00 49.73 C
ATOM 10 O3' A A1082 36.364 100.704 121.013 1.00 52.42 O
ATOM 11 C2' A A1082 37.434 101.304 123.110 1.00 47.68 C
ATOM 12 O2' A A1082 38.468 100.440 122.695 1.00 47.85 O
ATOM 13 C1' A A1082 37.720 102.730 122.641 1.00 48.50 C
ATOM 14 N9 A A1082 38.570 103.554 123.507 1.00 48.15 N
ATOM 15 C8 A A1082 38.923 103.372 124.821 1.00 47.57 C
ATOM 16 N7 A A1082 39.644 104.350 125.313 1.00 47.12 N
ATOM 17 C5 A A1082 39.787 105.227 124.249 1.00 46.79 C
ATOM 18 C6 A A1082 40.423 106.473 124.128 1.00 47.38 C
ATOM 19 N6 A A1082 41.046 107.088 125.136 1.00 47.13 N
ATOM 20 N1 A A1082 40.389 107.081 122.922 1.00 46.74 N
ATOM 21 C2 A A1082 39.753 106.474 121.919 1.00 47.04 C
ATOM 22 N3 A A1082 39.106 105.315 121.912 1.00 47.38 N
ATOM 23 C4 A A1082 39.156 104.736 123.124 1.00 47.56 C
ATOM 24 P A A1083 35.289 99.832 120.189 1.00 52.99 P
ATOM 25 OP1 A A1083 35.627 100.021 118.751 1.00 49.91 O
ATOM 26 OP2 A A1083 33.907 100.138 120.670 1.00 53.14 O
ATOM 27 O5' A A1083 35.592 98.334 120.640 1.00 51.44 O
TER
ATOM 1 O3' U B1196 39.440 111.703 126.564 1.00 48.42 O
ATOM 2 P C B1197 39.899 110.202 126.221 1.00 47.21 P
ATOM 3 OP1 C B1197 40.392 109.619 127.491 1.00 47.35 O
ATOM 4 OP2 C B1197 40.772 110.191 125.023 1.00 47.73 O
ATOM 5 O5' C B1197 38.543 109.461 125.831 1.00 49.72 O
ATOM 6 C5' C B1197 38.013 109.506 124.481 1.00 47.50 C
ATOM 7 C4' C B1197 36.916 108.476 124.329 1.00 46.42 C
ATOM 8 O4' C B1197 36.071 108.538 125.502 1.00 45.91 O
ATOM 9 C3' C B1197 35.985 108.669 123.139 1.00 46.15 C
ATOM 10 O3' C B1197 36.461 107.971 121.979 1.00 45.98 O
ATOM 11 C2' C B1197 34.671 108.064 123.634 1.00 44.63 C
ATOM 12 O2' C B1197 34.599 106.662 123.495 1.00 45.66 O
ATOM 13 C1' C B1197 34.717 108.390 125.127 1.00 43.96 C
ATOM 14 N1 C B1197 33.987 109.607 125.512 1.00 42.20 N
ATOM 15 C2 C B1197 32.617 109.517 125.712 1.00 42.24 C
ATOM 16 O2 C B1197 32.064 108.424 125.549 1.00 43.86 O
ATOM 17 N3 C B1197 31.925 110.617 126.074 1.00 42.34 N
ATOM 18 C4 C B1197 32.561 111.778 126.232 1.00 42.58 C
ATOM 19 N4 C B1197 31.835 112.843 126.597 1.00 43.75 N
ATOM 20 C5 C B1197 33.966 111.901 126.027 1.00 39.87 C
ATOM 21 C6 C B1197 34.632 110.803 125.673 1.00 40.23 C
ATOM 22 P G B1198 37.067 108.783 120.724 1.00 45.82 P
ATOM 23 OP1 G B1198 36.955 107.907 119.529 1.00 46.92 O
ATOM 24 OP2 G B1198 38.402 109.297 121.135 1.00 45.87 O
ATOM 25 O5' G B1198 36.093 110.026 120.514 1.00 44.42 O
TER
Atoms:
OP1: (32.122,105.613,123.608)
OP2: (31.767,103.423,122.298)
C3': (36.123,101.012,122.386)
C1': (37.720,102.730,122.641)
C5': (34.418,102.541,123.546)
O4': (36.458,103.363,122.538)
C8: (38.923,103.372,124.821)
O2': (38.468,100.440,122.695)
C6: (40.423,106.473,124.128)
C5: (39.787,105.227,124.249)
C4: (39.156,104.736,123.124)
P: (32.324,104.147,123.473)
C4': (35.415,102.358,122.432)
C2': (37.434,101.304,123.110)
C2: (39.753,106.474,121.919)
N1: (40.389,107.081,122.922)
N3: (39.106,105.315,121.912)
N6: (41.046,107.088,125.136)
N7: (39.644,104.350,125.313)
N9: (38.570,103.554,123.507)
O5': (33.891,103.882,123.512)
O3': (36.364,100.704,121.013)
OP2: (31.767,103.423,122.298)
C3': (36.123,101.012,122.386)
C1': (37.720,102.730,122.641)
C5': (34.418,102.541,123.546)
O4': (36.458,103.363,122.538)
C8: (38.923,103.372,124.821)
O2': (38.468,100.440,122.695)
C6: (40.423,106.473,124.128)
C5: (39.787,105.227,124.249)
C4: (39.156,104.736,123.124)
P: (32.324,104.147,123.473)
C4': (35.415,102.358,122.432)
C2': (37.434,101.304,123.110)
C2: (39.753,106.474,121.919)
N1: (40.389,107.081,122.922)
N3: (39.106,105.315,121.912)
N6: (41.046,107.088,125.136)
N7: (39.644,104.350,125.313)
N9: (38.570,103.554,123.507)
O5': (33.891,103.882,123.512)
O3': (36.364,100.704,121.013)
C2: (32.617,109.517,125.712)
OP1: (40.392,109.619,127.491)
OP2: (40.772,110.191,125.023)
C4: (32.561,111.778,126.232)
O5': (38.543,109.461,125.831)
C3': (35.985,108.669,123.139)
C1': (34.717,108.390,125.127)
O4': (36.071,108.538,125.502)
C5': (38.013,109.506,124.481)
P: (39.899,110.202,126.221)
O2: (32.064,108.424,125.549)
C4': (36.916,108.476,124.329)
C2': (34.671,108.064,123.634)
O2': (34.599,106.662,123.495)
N1: (33.987,109.607,125.512)
N3: (31.925,110.617,126.074)
N4: (31.835,112.843,126.597)
C6: (34.632,110.803,125.673)
C5: (33.966,111.901,126.027)
O3': (36.461,107.971,121.979)
OP1: (40.392,109.619,127.491)
OP2: (40.772,110.191,125.023)
C4: (32.561,111.778,126.232)
O5': (38.543,109.461,125.831)
C3': (35.985,108.669,123.139)
C1': (34.717,108.390,125.127)
O4': (36.071,108.538,125.502)
C5': (38.013,109.506,124.481)
P: (39.899,110.202,126.221)
O2: (32.064,108.424,125.549)
C4': (36.916,108.476,124.329)
C2': (34.671,108.064,123.634)
O2': (34.599,106.662,123.495)
N1: (33.987,109.607,125.512)
N3: (31.925,110.617,126.074)
N4: (31.835,112.843,126.597)
C6: (34.632,110.803,125.673)
C5: (33.966,111.901,126.027)
O3': (36.461,107.971,121.979)
Image (generated by PyMOL):