Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.393 102.666 106.345 1.00 61.71 O
ATOM 2 P G A 580 -6.384 103.014 104.776 1.00 61.97 P
ATOM 3 OP1 G A 580 -6.229 104.487 104.646 1.00 60.74 O
ATOM 4 OP2 G A 580 -7.547 102.340 104.139 1.00 62.09 O
ATOM 5 O5' G A 580 -5.090 102.267 104.220 1.00 60.07 O
ATOM 6 C5' G A 580 -3.763 102.577 104.700 1.00 55.78 C
ATOM 7 C4' G A 580 -2.766 101.628 104.081 1.00 55.35 C
ATOM 8 O4' G A 580 -3.000 100.288 104.586 1.00 54.93 O
ATOM 9 C3' G A 580 -2.876 101.506 102.565 1.00 54.68 C
ATOM 10 O3' G A 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 11 C2' G A 580 -2.362 100.097 102.289 1.00 53.98 C
ATOM 12 O2' G A 580 -0.960 100.032 102.137 1.00 55.61 O
ATOM 13 C1' G A 580 -2.807 99.340 103.544 1.00 53.77 C
ATOM 14 N9 G A 580 -4.075 98.661 103.316 1.00 52.66 N
ATOM 15 C8 G A 580 -5.330 99.141 103.614 1.00 54.73 C
ATOM 16 N7 G A 580 -6.286 98.341 103.239 1.00 54.42 N
ATOM 17 C5 G A 580 -5.625 97.262 102.673 1.00 52.99 C
ATOM 18 C6 G A 580 -6.139 96.099 102.092 1.00 52.46 C
ATOM 19 O6 G A 580 -7.318 95.781 101.951 1.00 55.85 O
ATOM 20 N1 G A 580 -5.128 95.258 101.644 1.00 50.87 N
ATOM 21 C2 G A 580 -3.785 95.517 101.747 1.00 51.35 C
ATOM 22 N2 G A 580 -2.958 94.579 101.265 1.00 51.65 N
ATOM 23 N3 G A 580 -3.288 96.615 102.286 1.00 51.87 N
ATOM 24 C4 G A 580 -4.259 97.439 102.726 1.00 52.28 C
ATOM 25 P A A 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 26 OP1 A A 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 27 OP2 A A 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 28 O5' A A 581 -1.650 104.393 100.388 1.00 58.66 O
TER
ATOM 1 O3' G B 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 2 P A B 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 3 OP1 A B 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 4 OP2 A B 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 5 O5' A B 581 -1.650 104.393 100.388 1.00 58.66 O
ATOM 6 C5' A B 581 -0.287 104.758 100.682 1.00 57.86 C
ATOM 7 C4' A B 581 0.603 104.443 99.505 1.00 58.58 C
ATOM 8 O4' A B 581 0.747 103.009 99.382 1.00 60.21 O
ATOM 9 C3' A B 581 0.073 104.893 98.157 1.00 58.96 C
ATOM 10 O3' A B 581 0.366 106.252 97.889 1.00 56.29 O
ATOM 11 C2' A B 581 0.742 103.928 97.187 1.00 61.77 C
ATOM 12 O2' A B 581 2.052 104.303 96.814 1.00 64.91 O
ATOM 13 C1' A B 581 0.785 102.642 98.014 1.00 62.91 C
ATOM 14 N9 A B 581 -0.377 101.798 97.739 1.00 67.26 N
ATOM 15 C8 A B 581 -1.460 101.556 98.547 1.00 67.61 C
ATOM 16 N7 A B 581 -2.380 100.810 97.987 1.00 68.78 N
ATOM 17 C5 A B 581 -1.866 100.532 96.731 1.00 69.66 C
ATOM 18 C6 A B 581 -2.371 99.800 95.645 1.00 71.37 C
ATOM 19 N6 A B 581 -3.561 99.195 95.648 1.00 71.91 N
ATOM 20 N1 A B 581 -1.603 99.713 94.538 1.00 72.45 N
ATOM 21 C2 A B 581 -0.413 100.323 94.534 1.00 72.79 C
ATOM 22 N3 A B 581 0.169 101.043 95.490 1.00 71.66 N
ATOM 23 C4 A B 581 -0.621 101.113 96.573 1.00 69.56 C
ATOM 24 P C B 582 -0.705 107.140 97.097 1.00 55.20 P
ATOM 25 OP1 C B 582 -0.106 108.467 96.816 1.00 55.77 O
ATOM 26 OP2 C B 582 -1.978 107.069 97.845 1.00 57.44 O
ATOM 27 O5' C B 582 -0.860 106.354 95.723 1.00 53.65 O
TER
ATOM 2 P G A 580 -6.384 103.014 104.776 1.00 61.97 P
ATOM 3 OP1 G A 580 -6.229 104.487 104.646 1.00 60.74 O
ATOM 4 OP2 G A 580 -7.547 102.340 104.139 1.00 62.09 O
ATOM 5 O5' G A 580 -5.090 102.267 104.220 1.00 60.07 O
ATOM 6 C5' G A 580 -3.763 102.577 104.700 1.00 55.78 C
ATOM 7 C4' G A 580 -2.766 101.628 104.081 1.00 55.35 C
ATOM 8 O4' G A 580 -3.000 100.288 104.586 1.00 54.93 O
ATOM 9 C3' G A 580 -2.876 101.506 102.565 1.00 54.68 C
ATOM 10 O3' G A 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 11 C2' G A 580 -2.362 100.097 102.289 1.00 53.98 C
ATOM 12 O2' G A 580 -0.960 100.032 102.137 1.00 55.61 O
ATOM 13 C1' G A 580 -2.807 99.340 103.544 1.00 53.77 C
ATOM 14 N9 G A 580 -4.075 98.661 103.316 1.00 52.66 N
ATOM 15 C8 G A 580 -5.330 99.141 103.614 1.00 54.73 C
ATOM 16 N7 G A 580 -6.286 98.341 103.239 1.00 54.42 N
ATOM 17 C5 G A 580 -5.625 97.262 102.673 1.00 52.99 C
ATOM 18 C6 G A 580 -6.139 96.099 102.092 1.00 52.46 C
ATOM 19 O6 G A 580 -7.318 95.781 101.951 1.00 55.85 O
ATOM 20 N1 G A 580 -5.128 95.258 101.644 1.00 50.87 N
ATOM 21 C2 G A 580 -3.785 95.517 101.747 1.00 51.35 C
ATOM 22 N2 G A 580 -2.958 94.579 101.265 1.00 51.65 N
ATOM 23 N3 G A 580 -3.288 96.615 102.286 1.00 51.87 N
ATOM 24 C4 G A 580 -4.259 97.439 102.726 1.00 52.28 C
ATOM 25 P A A 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 26 OP1 A A 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 27 OP2 A A 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 28 O5' A A 581 -1.650 104.393 100.388 1.00 58.66 O
TER
ATOM 1 O3' G B 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 2 P A B 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 3 OP1 A B 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 4 OP2 A B 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 5 O5' A B 581 -1.650 104.393 100.388 1.00 58.66 O
ATOM 6 C5' A B 581 -0.287 104.758 100.682 1.00 57.86 C
ATOM 7 C4' A B 581 0.603 104.443 99.505 1.00 58.58 C
ATOM 8 O4' A B 581 0.747 103.009 99.382 1.00 60.21 O
ATOM 9 C3' A B 581 0.073 104.893 98.157 1.00 58.96 C
ATOM 10 O3' A B 581 0.366 106.252 97.889 1.00 56.29 O
ATOM 11 C2' A B 581 0.742 103.928 97.187 1.00 61.77 C
ATOM 12 O2' A B 581 2.052 104.303 96.814 1.00 64.91 O
ATOM 13 C1' A B 581 0.785 102.642 98.014 1.00 62.91 C
ATOM 14 N9 A B 581 -0.377 101.798 97.739 1.00 67.26 N
ATOM 15 C8 A B 581 -1.460 101.556 98.547 1.00 67.61 C
ATOM 16 N7 A B 581 -2.380 100.810 97.987 1.00 68.78 N
ATOM 17 C5 A B 581 -1.866 100.532 96.731 1.00 69.66 C
ATOM 18 C6 A B 581 -2.371 99.800 95.645 1.00 71.37 C
ATOM 19 N6 A B 581 -3.561 99.195 95.648 1.00 71.91 N
ATOM 20 N1 A B 581 -1.603 99.713 94.538 1.00 72.45 N
ATOM 21 C2 A B 581 -0.413 100.323 94.534 1.00 72.79 C
ATOM 22 N3 A B 581 0.169 101.043 95.490 1.00 71.66 N
ATOM 23 C4 A B 581 -0.621 101.113 96.573 1.00 69.56 C
ATOM 24 P C B 582 -0.705 107.140 97.097 1.00 55.20 P
ATOM 25 OP1 C B 582 -0.106 108.467 96.816 1.00 55.77 O
ATOM 26 OP2 C B 582 -1.978 107.069 97.845 1.00 57.44 O
ATOM 27 O5' C B 582 -0.860 106.354 95.723 1.00 53.65 O
TER
Atoms:
OP1: (-6.229,104.487,104.646)
OP2: (-7.547,102.340,104.139)
C3': (-2.876,101.506,102.565)
C1': (-2.807,99.340,103.544)
C5': (-3.763,102.577,104.700)
O6: (-7.318,95.781,101.951)
O4': (-3.000,100.288,104.586)
C8: (-5.330,99.141,103.614)
C2: (-3.785,95.517,101.747)
C6: (-6.139,96.099,102.092)
C5: (-5.625,97.262,102.673)
C4: (-4.259,97.439,102.726)
P: (-6.384,103.014,104.776)
C4': (-2.766,101.628,104.081)
C2': (-2.362,100.097,102.289)
O2': (-0.960,100.032,102.137)
N1: (-5.128,95.258,101.644)
N2: (-2.958,94.579,101.265)
N3: (-3.288,96.615,102.286)
N7: (-6.286,98.341,103.239)
N9: (-4.075,98.661,103.316)
O5': (-5.090,102.267,104.220)
O3': (-2.057,102.460,101.910)
OP2: (-7.547,102.340,104.139)
C3': (-2.876,101.506,102.565)
C1': (-2.807,99.340,103.544)
C5': (-3.763,102.577,104.700)
O6: (-7.318,95.781,101.951)
O4': (-3.000,100.288,104.586)
C8: (-5.330,99.141,103.614)
C2: (-3.785,95.517,101.747)
C6: (-6.139,96.099,102.092)
C5: (-5.625,97.262,102.673)
C4: (-4.259,97.439,102.726)
P: (-6.384,103.014,104.776)
C4': (-2.766,101.628,104.081)
C2': (-2.362,100.097,102.289)
O2': (-0.960,100.032,102.137)
N1: (-5.128,95.258,101.644)
N2: (-2.958,94.579,101.265)
N3: (-3.288,96.615,102.286)
N7: (-6.286,98.341,103.239)
N9: (-4.075,98.661,103.316)
O5': (-5.090,102.267,104.220)
O3': (-2.057,102.460,101.910)
OP1: (-2.454,104.789,102.717)
OP2: (-3.997,103.771,100.940)
C3': (0.073,104.893,98.157)
C1': (0.785,102.642,98.014)
C5': (-0.287,104.758,100.682)
O4': (0.747,103.009,99.382)
C8: (-1.460,101.556,98.547)
O2': (2.052,104.303,96.814)
C6: (-2.371,99.800,95.645)
C5: (-1.866,100.532,96.731)
C4: (-0.621,101.113,96.573)
P: (-2.644,103.906,101.534)
C4': (0.603,104.443,99.505)
C2': (0.742,103.928,97.187)
C2: (-0.413,100.323,94.534)
N1: (-1.603,99.713,94.538)
N3: (0.169,101.043,95.490)
N6: (-3.561,99.195,95.648)
N7: (-2.380,100.810,97.987)
N9: (-0.377,101.798,97.739)
O5': (-1.650,104.393,100.388)
O3': (0.366,106.252,97.889)
OP2: (-3.997,103.771,100.940)
C3': (0.073,104.893,98.157)
C1': (0.785,102.642,98.014)
C5': (-0.287,104.758,100.682)
O4': (0.747,103.009,99.382)
C8: (-1.460,101.556,98.547)
O2': (2.052,104.303,96.814)
C6: (-2.371,99.800,95.645)
C5: (-1.866,100.532,96.731)
C4: (-0.621,101.113,96.573)
P: (-2.644,103.906,101.534)
C4': (0.603,104.443,99.505)
C2': (0.742,103.928,97.187)
C2: (-0.413,100.323,94.534)
N1: (-1.603,99.713,94.538)
N3: (0.169,101.043,95.490)
N6: (-3.561,99.195,95.648)
N7: (-2.380,100.810,97.987)
N9: (-0.377,101.798,97.739)
O5': (-1.650,104.393,100.388)
O3': (0.366,106.252,97.889)
Image (generated by PyMOL):