Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CXC:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -5.947 104.120 106.625 1.00 72.04 O
ATOM 2 P G A 580 -5.907 104.591 105.090 1.00 72.89 P
ATOM 3 OP1 G A 580 -5.555 106.034 105.073 1.00 70.09 O
ATOM 4 OP2 G A 580 -7.138 104.126 104.404 1.00 72.09 O
ATOM 5 O5' G A 580 -4.713 103.747 104.461 1.00 73.43 O
ATOM 6 C5' G A 580 -3.363 103.920 104.905 1.00 70.79 C
ATOM 7 C4' G A 580 -2.460 102.979 104.161 1.00 70.16 C
ATOM 8 O4' G A 580 -2.734 101.613 104.562 1.00 69.73 O
ATOM 9 C3' G A 580 -2.620 102.981 102.653 1.00 70.46 C
ATOM 10 O3' G A 580 -1.829 103.995 102.076 1.00 71.85 O
ATOM 11 C2' G A 580 -2.088 101.602 102.273 1.00 71.18 C
ATOM 12 O2' G A 580 -0.675 101.544 102.171 1.00 72.04 O
ATOM 13 C1' G A 580 -2.543 100.746 103.460 1.00 70.22 C
ATOM 14 N9 G A 580 -3.798 100.050 103.189 1.00 70.05 N
ATOM 15 C8 G A 580 -5.069 100.498 103.452 1.00 71.43 C
ATOM 16 N7 G A 580 -5.998 99.669 103.056 1.00 71.70 N
ATOM 17 C5 G A 580 -5.298 98.605 102.509 1.00 71.27 C
ATOM 18 C6 G A 580 -5.768 97.393 101.917 1.00 72.81 C
ATOM 19 O6 G A 580 -6.936 96.994 101.767 1.00 73.76 O
ATOM 20 N1 G A 580 -4.715 96.602 101.484 1.00 72.82 N
ATOM 21 C2 G A 580 -3.389 96.915 101.610 1.00 72.16 C
ATOM 22 N2 G A 580 -2.536 96.011 101.123 1.00 72.37 N
ATOM 23 N3 G A 580 -2.937 98.029 102.170 1.00 70.56 N
ATOM 24 C4 G A 580 -3.939 98.822 102.590 1.00 70.20 C
ATOM 25 P A A 581 -2.517 105.290 101.409 1.00 75.21 P
ATOM 26 OP1 A A 581 -2.455 106.419 102.425 1.00 74.53 O
ATOM 27 OP2 A A 581 -3.813 104.967 100.710 1.00 75.41 O
ATOM 28 O5' A A 581 -1.480 105.672 100.265 1.00 76.21 O
TER
ATOM 1 O3' G B 580 -1.829 103.995 102.076 1.00 71.85 O
ATOM 2 P A B 581 -2.517 105.290 101.409 1.00 75.21 P
ATOM 3 OP1 A B 581 -2.455 106.419 102.425 1.00 74.53 O
ATOM 4 OP2 A B 581 -3.813 104.967 100.710 1.00 75.41 O
ATOM 5 O5' A B 581 -1.480 105.672 100.265 1.00 76.21 O
ATOM 6 C5' A B 581 -0.182 106.205 100.602 1.00 77.03 C
ATOM 7 C4' A B 581 0.808 105.925 99.498 1.00 75.82 C
ATOM 8 O4' A B 581 1.013 104.496 99.396 1.00 77.42 O
ATOM 9 C3' A B 581 0.376 106.354 98.109 1.00 74.73 C
ATOM 10 O3' A B 581 0.681 107.715 97.871 1.00 70.62 O
ATOM 11 C2' A B 581 1.157 105.409 97.207 1.00 77.47 C
ATOM 12 O2' A B 581 2.491 105.830 96.992 1.00 77.99 O
ATOM 13 C1' A B 581 1.154 104.124 98.036 1.00 79.53 C
ATOM 14 N9 A B 581 0.021 103.269 97.709 1.00 83.53 N
ATOM 15 C8 A B 581 -1.082 103.059 98.490 1.00 85.68 C
ATOM 16 N7 A B 581 -1.962 102.254 97.955 1.00 87.96 N
ATOM 17 C5 A B 581 -1.400 101.907 96.736 1.00 87.87 C
ATOM 18 C6 A B 581 -1.849 101.075 95.690 1.00 89.13 C
ATOM 19 N6 A B 581 -3.009 100.412 95.717 1.00 89.73 N
ATOM 20 N1 A B 581 -1.054 100.946 94.607 1.00 90.52 N
ATOM 21 C2 A B 581 0.113 101.612 94.590 1.00 90.84 C
ATOM 22 N3 A B 581 0.644 102.421 95.516 1.00 88.45 N
ATOM 23 C4 A B 581 -0.175 102.525 96.572 1.00 86.50 C
ATOM 24 P C B 582 -0.373 108.632 97.085 1.00 67.98 P
ATOM 25 OP1 C B 582 0.272 109.937 96.800 1.00 67.11 O
ATOM 26 OP2 C B 582 -1.646 108.602 97.824 1.00 68.41 O
ATOM 27 O5' C B 582 -0.542 107.871 95.698 1.00 66.16 O
TER
ATOM 2 P G A 580 -5.907 104.591 105.090 1.00 72.89 P
ATOM 3 OP1 G A 580 -5.555 106.034 105.073 1.00 70.09 O
ATOM 4 OP2 G A 580 -7.138 104.126 104.404 1.00 72.09 O
ATOM 5 O5' G A 580 -4.713 103.747 104.461 1.00 73.43 O
ATOM 6 C5' G A 580 -3.363 103.920 104.905 1.00 70.79 C
ATOM 7 C4' G A 580 -2.460 102.979 104.161 1.00 70.16 C
ATOM 8 O4' G A 580 -2.734 101.613 104.562 1.00 69.73 O
ATOM 9 C3' G A 580 -2.620 102.981 102.653 1.00 70.46 C
ATOM 10 O3' G A 580 -1.829 103.995 102.076 1.00 71.85 O
ATOM 11 C2' G A 580 -2.088 101.602 102.273 1.00 71.18 C
ATOM 12 O2' G A 580 -0.675 101.544 102.171 1.00 72.04 O
ATOM 13 C1' G A 580 -2.543 100.746 103.460 1.00 70.22 C
ATOM 14 N9 G A 580 -3.798 100.050 103.189 1.00 70.05 N
ATOM 15 C8 G A 580 -5.069 100.498 103.452 1.00 71.43 C
ATOM 16 N7 G A 580 -5.998 99.669 103.056 1.00 71.70 N
ATOM 17 C5 G A 580 -5.298 98.605 102.509 1.00 71.27 C
ATOM 18 C6 G A 580 -5.768 97.393 101.917 1.00 72.81 C
ATOM 19 O6 G A 580 -6.936 96.994 101.767 1.00 73.76 O
ATOM 20 N1 G A 580 -4.715 96.602 101.484 1.00 72.82 N
ATOM 21 C2 G A 580 -3.389 96.915 101.610 1.00 72.16 C
ATOM 22 N2 G A 580 -2.536 96.011 101.123 1.00 72.37 N
ATOM 23 N3 G A 580 -2.937 98.029 102.170 1.00 70.56 N
ATOM 24 C4 G A 580 -3.939 98.822 102.590 1.00 70.20 C
ATOM 25 P A A 581 -2.517 105.290 101.409 1.00 75.21 P
ATOM 26 OP1 A A 581 -2.455 106.419 102.425 1.00 74.53 O
ATOM 27 OP2 A A 581 -3.813 104.967 100.710 1.00 75.41 O
ATOM 28 O5' A A 581 -1.480 105.672 100.265 1.00 76.21 O
TER
ATOM 1 O3' G B 580 -1.829 103.995 102.076 1.00 71.85 O
ATOM 2 P A B 581 -2.517 105.290 101.409 1.00 75.21 P
ATOM 3 OP1 A B 581 -2.455 106.419 102.425 1.00 74.53 O
ATOM 4 OP2 A B 581 -3.813 104.967 100.710 1.00 75.41 O
ATOM 5 O5' A B 581 -1.480 105.672 100.265 1.00 76.21 O
ATOM 6 C5' A B 581 -0.182 106.205 100.602 1.00 77.03 C
ATOM 7 C4' A B 581 0.808 105.925 99.498 1.00 75.82 C
ATOM 8 O4' A B 581 1.013 104.496 99.396 1.00 77.42 O
ATOM 9 C3' A B 581 0.376 106.354 98.109 1.00 74.73 C
ATOM 10 O3' A B 581 0.681 107.715 97.871 1.00 70.62 O
ATOM 11 C2' A B 581 1.157 105.409 97.207 1.00 77.47 C
ATOM 12 O2' A B 581 2.491 105.830 96.992 1.00 77.99 O
ATOM 13 C1' A B 581 1.154 104.124 98.036 1.00 79.53 C
ATOM 14 N9 A B 581 0.021 103.269 97.709 1.00 83.53 N
ATOM 15 C8 A B 581 -1.082 103.059 98.490 1.00 85.68 C
ATOM 16 N7 A B 581 -1.962 102.254 97.955 1.00 87.96 N
ATOM 17 C5 A B 581 -1.400 101.907 96.736 1.00 87.87 C
ATOM 18 C6 A B 581 -1.849 101.075 95.690 1.00 89.13 C
ATOM 19 N6 A B 581 -3.009 100.412 95.717 1.00 89.73 N
ATOM 20 N1 A B 581 -1.054 100.946 94.607 1.00 90.52 N
ATOM 21 C2 A B 581 0.113 101.612 94.590 1.00 90.84 C
ATOM 22 N3 A B 581 0.644 102.421 95.516 1.00 88.45 N
ATOM 23 C4 A B 581 -0.175 102.525 96.572 1.00 86.50 C
ATOM 24 P C B 582 -0.373 108.632 97.085 1.00 67.98 P
ATOM 25 OP1 C B 582 0.272 109.937 96.800 1.00 67.11 O
ATOM 26 OP2 C B 582 -1.646 108.602 97.824 1.00 68.41 O
ATOM 27 O5' C B 582 -0.542 107.871 95.698 1.00 66.16 O
TER
Atoms:
OP1: (-5.555,106.034,105.073)
OP2: (-7.138,104.126,104.404)
C3': (-2.620,102.981,102.653)
C1': (-2.543,100.746,103.460)
C5': (-3.363,103.920,104.905)
O6: (-6.936,96.994,101.767)
O4': (-2.734,101.613,104.562)
C8: (-5.069,100.498,103.452)
C2: (-3.389,96.915,101.610)
C6: (-5.768,97.393,101.917)
C5: (-5.298,98.605,102.509)
C4: (-3.939,98.822,102.590)
P: (-5.907,104.591,105.090)
C4': (-2.460,102.979,104.161)
C2': (-2.088,101.602,102.273)
O2': (-0.675,101.544,102.171)
N1: (-4.715,96.602,101.484)
N2: (-2.536,96.011,101.123)
N3: (-2.937,98.029,102.170)
N7: (-5.998,99.669,103.056)
N9: (-3.798,100.050,103.189)
O5': (-4.713,103.747,104.461)
O3': (-1.829,103.995,102.076)
OP2: (-7.138,104.126,104.404)
C3': (-2.620,102.981,102.653)
C1': (-2.543,100.746,103.460)
C5': (-3.363,103.920,104.905)
O6: (-6.936,96.994,101.767)
O4': (-2.734,101.613,104.562)
C8: (-5.069,100.498,103.452)
C2: (-3.389,96.915,101.610)
C6: (-5.768,97.393,101.917)
C5: (-5.298,98.605,102.509)
C4: (-3.939,98.822,102.590)
P: (-5.907,104.591,105.090)
C4': (-2.460,102.979,104.161)
C2': (-2.088,101.602,102.273)
O2': (-0.675,101.544,102.171)
N1: (-4.715,96.602,101.484)
N2: (-2.536,96.011,101.123)
N3: (-2.937,98.029,102.170)
N7: (-5.998,99.669,103.056)
N9: (-3.798,100.050,103.189)
O5': (-4.713,103.747,104.461)
O3': (-1.829,103.995,102.076)
OP1: (-2.455,106.419,102.425)
OP2: (-3.813,104.967,100.710)
C3': (0.376,106.354,98.109)
C1': (1.154,104.124,98.036)
C5': (-0.182,106.205,100.602)
O4': (1.013,104.496,99.396)
C8: (-1.082,103.059,98.490)
O2': (2.491,105.830,96.992)
C6: (-1.849,101.075,95.690)
C5: (-1.400,101.907,96.736)
C4: (-0.175,102.525,96.572)
P: (-2.517,105.290,101.409)
C4': (0.808,105.925,99.498)
C2': (1.157,105.409,97.207)
C2: (0.113,101.612,94.590)
N1: (-1.054,100.946,94.607)
N3: (0.644,102.421,95.516)
N6: (-3.009,100.412,95.717)
N7: (-1.962,102.254,97.955)
N9: (0.021,103.269,97.709)
O5': (-1.480,105.672,100.265)
O3': (0.681,107.715,97.871)
OP2: (-3.813,104.967,100.710)
C3': (0.376,106.354,98.109)
C1': (1.154,104.124,98.036)
C5': (-0.182,106.205,100.602)
O4': (1.013,104.496,99.396)
C8: (-1.082,103.059,98.490)
O2': (2.491,105.830,96.992)
C6: (-1.849,101.075,95.690)
C5: (-1.400,101.907,96.736)
C4: (-0.175,102.525,96.572)
P: (-2.517,105.290,101.409)
C4': (0.808,105.925,99.498)
C2': (1.157,105.409,97.207)
C2: (0.113,101.612,94.590)
N1: (-1.054,100.946,94.607)
N3: (0.644,102.421,95.516)
N6: (-3.009,100.412,95.717)
N7: (-1.962,102.254,97.955)
N9: (0.021,103.269,97.709)
O5': (-1.480,105.672,100.265)
O3': (0.681,107.715,97.871)
Image (generated by PyMOL):