Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.233 103.765 106.440 1.00 52.81 O
ATOM 2 P G A 580 -6.209 104.233 104.901 1.00 52.28 P
ATOM 3 OP1 G A 580 -5.898 105.687 104.883 1.00 49.61 O
ATOM 4 OP2 G A 580 -7.442 103.735 104.235 1.00 51.46 O
ATOM 5 O5' G A 580 -4.991 103.425 104.269 1.00 52.64 O
ATOM 6 C5' G A 580 -3.625 103.746 104.595 1.00 51.65 C
ATOM 7 C4' G A 580 -2.695 102.747 103.953 1.00 51.18 C
ATOM 8 O4' G A 580 -2.992 101.427 104.472 1.00 51.90 O
ATOM 9 C3' G A 580 -2.845 102.590 102.449 1.00 50.53 C
ATOM 10 O3' G A 580 -2.082 103.554 101.751 1.00 48.58 O
ATOM 11 C2' G A 580 -2.293 101.194 102.215 1.00 51.55 C
ATOM 12 O2' G A 580 -0.882 101.161 102.202 1.00 53.13 O
ATOM 13 C1' G A 580 -2.812 100.461 103.451 1.00 52.21 C
ATOM 14 N9 G A 580 -4.101 99.838 103.191 1.00 54.23 N
ATOM 15 C8 G A 580 -5.346 100.358 103.460 1.00 55.92 C
ATOM 16 N7 G A 580 -6.318 99.572 103.088 1.00 57.81 N
ATOM 17 C5 G A 580 -5.675 98.466 102.547 1.00 56.48 C
ATOM 18 C6 G A 580 -6.206 97.288 101.981 1.00 56.62 C
ATOM 19 O6 G A 580 -7.391 96.966 101.850 1.00 58.28 O
ATOM 20 N1 G A 580 -5.202 96.432 101.546 1.00 56.20 N
ATOM 21 C2 G A 580 -3.857 96.675 101.654 1.00 56.33 C
ATOM 22 N2 G A 580 -3.045 95.723 101.181 1.00 56.51 N
ATOM 23 N3 G A 580 -3.347 97.769 102.189 1.00 56.12 N
ATOM 24 C4 G A 580 -4.307 98.616 102.608 1.00 55.48 C
ATOM 25 P A A 581 -2.785 104.888 101.218 1.00 47.97 P
ATOM 26 OP1 A A 581 -2.812 105.845 102.357 1.00 46.87 O
ATOM 27 OP2 A A 581 -4.045 104.518 100.529 1.00 47.78 O
ATOM 28 O5' A A 581 -1.774 105.437 100.121 1.00 48.97 O
TER
ATOM 1 O3' G B 580 -2.082 103.554 101.751 1.00 48.58 O
ATOM 2 P A B 581 -2.785 104.888 101.218 1.00 47.97 P
ATOM 3 OP1 A B 581 -2.812 105.845 102.357 1.00 46.87 O
ATOM 4 OP2 A B 581 -4.045 104.518 100.529 1.00 47.78 O
ATOM 5 O5' A B 581 -1.774 105.437 100.121 1.00 48.97 O
ATOM 6 C5' A B 581 -0.416 105.776 100.459 1.00 47.30 C
ATOM 7 C4' A B 581 0.512 105.364 99.344 1.00 46.70 C
ATOM 8 O4' A B 581 0.532 103.917 99.244 1.00 48.47 O
ATOM 9 C3' A B 581 0.099 105.818 97.958 1.00 45.61 C
ATOM 10 O3' A B 581 0.465 107.160 97.704 1.00 41.00 O
ATOM 11 C2' A B 581 0.813 104.816 97.064 1.00 48.80 C
ATOM 12 O2' A B 581 2.183 105.104 96.879 1.00 50.37 O
ATOM 13 C1' A B 581 0.659 103.534 97.886 1.00 51.12 C
ATOM 14 N9 A B 581 -0.552 102.817 97.508 1.00 56.11 N
ATOM 15 C8 A B 581 -1.786 102.860 98.107 1.00 58.52 C
ATOM 16 N7 A B 581 -2.698 102.152 97.489 1.00 61.46 N
ATOM 17 C5 A B 581 -2.015 101.593 96.417 1.00 61.34 C
ATOM 18 C6 A B 581 -2.425 100.751 95.363 1.00 62.47 C
ATOM 19 N6 A B 581 -3.676 100.312 95.200 1.00 63.50 N
ATOM 20 N1 A B 581 -1.492 100.378 94.463 1.00 63.50 N
ATOM 21 C2 A B 581 -0.238 100.829 94.612 1.00 63.65 C
ATOM 22 N3 A B 581 0.265 101.629 95.551 1.00 62.08 N
ATOM 23 C4 A B 581 -0.688 101.980 96.430 1.00 59.79 C
ATOM 24 P C B 582 -0.581 108.130 96.979 1.00 38.47 P
ATOM 25 OP1 C B 582 0.048 109.455 96.800 1.00 39.60 O
ATOM 26 OP2 C B 582 -1.847 108.034 97.724 1.00 41.19 O
ATOM 27 O5' C B 582 -0.771 107.457 95.549 1.00 37.04 O
TER
ATOM 2 P G A 580 -6.209 104.233 104.901 1.00 52.28 P
ATOM 3 OP1 G A 580 -5.898 105.687 104.883 1.00 49.61 O
ATOM 4 OP2 G A 580 -7.442 103.735 104.235 1.00 51.46 O
ATOM 5 O5' G A 580 -4.991 103.425 104.269 1.00 52.64 O
ATOM 6 C5' G A 580 -3.625 103.746 104.595 1.00 51.65 C
ATOM 7 C4' G A 580 -2.695 102.747 103.953 1.00 51.18 C
ATOM 8 O4' G A 580 -2.992 101.427 104.472 1.00 51.90 O
ATOM 9 C3' G A 580 -2.845 102.590 102.449 1.00 50.53 C
ATOM 10 O3' G A 580 -2.082 103.554 101.751 1.00 48.58 O
ATOM 11 C2' G A 580 -2.293 101.194 102.215 1.00 51.55 C
ATOM 12 O2' G A 580 -0.882 101.161 102.202 1.00 53.13 O
ATOM 13 C1' G A 580 -2.812 100.461 103.451 1.00 52.21 C
ATOM 14 N9 G A 580 -4.101 99.838 103.191 1.00 54.23 N
ATOM 15 C8 G A 580 -5.346 100.358 103.460 1.00 55.92 C
ATOM 16 N7 G A 580 -6.318 99.572 103.088 1.00 57.81 N
ATOM 17 C5 G A 580 -5.675 98.466 102.547 1.00 56.48 C
ATOM 18 C6 G A 580 -6.206 97.288 101.981 1.00 56.62 C
ATOM 19 O6 G A 580 -7.391 96.966 101.850 1.00 58.28 O
ATOM 20 N1 G A 580 -5.202 96.432 101.546 1.00 56.20 N
ATOM 21 C2 G A 580 -3.857 96.675 101.654 1.00 56.33 C
ATOM 22 N2 G A 580 -3.045 95.723 101.181 1.00 56.51 N
ATOM 23 N3 G A 580 -3.347 97.769 102.189 1.00 56.12 N
ATOM 24 C4 G A 580 -4.307 98.616 102.608 1.00 55.48 C
ATOM 25 P A A 581 -2.785 104.888 101.218 1.00 47.97 P
ATOM 26 OP1 A A 581 -2.812 105.845 102.357 1.00 46.87 O
ATOM 27 OP2 A A 581 -4.045 104.518 100.529 1.00 47.78 O
ATOM 28 O5' A A 581 -1.774 105.437 100.121 1.00 48.97 O
TER
ATOM 1 O3' G B 580 -2.082 103.554 101.751 1.00 48.58 O
ATOM 2 P A B 581 -2.785 104.888 101.218 1.00 47.97 P
ATOM 3 OP1 A B 581 -2.812 105.845 102.357 1.00 46.87 O
ATOM 4 OP2 A B 581 -4.045 104.518 100.529 1.00 47.78 O
ATOM 5 O5' A B 581 -1.774 105.437 100.121 1.00 48.97 O
ATOM 6 C5' A B 581 -0.416 105.776 100.459 1.00 47.30 C
ATOM 7 C4' A B 581 0.512 105.364 99.344 1.00 46.70 C
ATOM 8 O4' A B 581 0.532 103.917 99.244 1.00 48.47 O
ATOM 9 C3' A B 581 0.099 105.818 97.958 1.00 45.61 C
ATOM 10 O3' A B 581 0.465 107.160 97.704 1.00 41.00 O
ATOM 11 C2' A B 581 0.813 104.816 97.064 1.00 48.80 C
ATOM 12 O2' A B 581 2.183 105.104 96.879 1.00 50.37 O
ATOM 13 C1' A B 581 0.659 103.534 97.886 1.00 51.12 C
ATOM 14 N9 A B 581 -0.552 102.817 97.508 1.00 56.11 N
ATOM 15 C8 A B 581 -1.786 102.860 98.107 1.00 58.52 C
ATOM 16 N7 A B 581 -2.698 102.152 97.489 1.00 61.46 N
ATOM 17 C5 A B 581 -2.015 101.593 96.417 1.00 61.34 C
ATOM 18 C6 A B 581 -2.425 100.751 95.363 1.00 62.47 C
ATOM 19 N6 A B 581 -3.676 100.312 95.200 1.00 63.50 N
ATOM 20 N1 A B 581 -1.492 100.378 94.463 1.00 63.50 N
ATOM 21 C2 A B 581 -0.238 100.829 94.612 1.00 63.65 C
ATOM 22 N3 A B 581 0.265 101.629 95.551 1.00 62.08 N
ATOM 23 C4 A B 581 -0.688 101.980 96.430 1.00 59.79 C
ATOM 24 P C B 582 -0.581 108.130 96.979 1.00 38.47 P
ATOM 25 OP1 C B 582 0.048 109.455 96.800 1.00 39.60 O
ATOM 26 OP2 C B 582 -1.847 108.034 97.724 1.00 41.19 O
ATOM 27 O5' C B 582 -0.771 107.457 95.549 1.00 37.04 O
TER
Atoms:
OP1: (-5.898,105.687,104.883)
OP2: (-7.442,103.735,104.235)
C3': (-2.845,102.590,102.449)
C1': (-2.812,100.461,103.451)
C5': (-3.625,103.746,104.595)
O6: (-7.391,96.966,101.850)
O4': (-2.992,101.427,104.472)
C8: (-5.346,100.358,103.460)
C2: (-3.857,96.675,101.654)
C6: (-6.206,97.288,101.981)
C5: (-5.675,98.466,102.547)
C4: (-4.307,98.616,102.608)
P: (-6.209,104.233,104.901)
C4': (-2.695,102.747,103.953)
C2': (-2.293,101.194,102.215)
O2': (-0.882,101.161,102.202)
N1: (-5.202,96.432,101.546)
N2: (-3.045,95.723,101.181)
N3: (-3.347,97.769,102.189)
N7: (-6.318,99.572,103.088)
N9: (-4.101,99.838,103.191)
O5': (-4.991,103.425,104.269)
O3': (-2.082,103.554,101.751)
OP2: (-7.442,103.735,104.235)
C3': (-2.845,102.590,102.449)
C1': (-2.812,100.461,103.451)
C5': (-3.625,103.746,104.595)
O6: (-7.391,96.966,101.850)
O4': (-2.992,101.427,104.472)
C8: (-5.346,100.358,103.460)
C2: (-3.857,96.675,101.654)
C6: (-6.206,97.288,101.981)
C5: (-5.675,98.466,102.547)
C4: (-4.307,98.616,102.608)
P: (-6.209,104.233,104.901)
C4': (-2.695,102.747,103.953)
C2': (-2.293,101.194,102.215)
O2': (-0.882,101.161,102.202)
N1: (-5.202,96.432,101.546)
N2: (-3.045,95.723,101.181)
N3: (-3.347,97.769,102.189)
N7: (-6.318,99.572,103.088)
N9: (-4.101,99.838,103.191)
O5': (-4.991,103.425,104.269)
O3': (-2.082,103.554,101.751)
OP1: (-2.812,105.845,102.357)
OP2: (-4.045,104.518,100.529)
C3': (0.099,105.818,97.958)
C1': (0.659,103.534,97.886)
C5': (-0.416,105.776,100.459)
O4': (0.532,103.917,99.244)
C8: (-1.786,102.860,98.107)
O2': (2.183,105.104,96.879)
C6: (-2.425,100.751,95.363)
C5: (-2.015,101.593,96.417)
C4: (-0.688,101.980,96.430)
P: (-2.785,104.888,101.218)
C4': (0.512,105.364,99.344)
C2': (0.813,104.816,97.064)
C2: (-0.238,100.829,94.612)
N1: (-1.492,100.378,94.463)
N3: (0.265,101.629,95.551)
N6: (-3.676,100.312,95.200)
N7: (-2.698,102.152,97.489)
N9: (-0.552,102.817,97.508)
O5': (-1.774,105.437,100.121)
O3': (0.465,107.160,97.704)
OP2: (-4.045,104.518,100.529)
C3': (0.099,105.818,97.958)
C1': (0.659,103.534,97.886)
C5': (-0.416,105.776,100.459)
O4': (0.532,103.917,99.244)
C8: (-1.786,102.860,98.107)
O2': (2.183,105.104,96.879)
C6: (-2.425,100.751,95.363)
C5: (-2.015,101.593,96.417)
C4: (-0.688,101.980,96.430)
P: (-2.785,104.888,101.218)
C4': (0.512,105.364,99.344)
C2': (0.813,104.816,97.064)
C2: (-0.238,100.829,94.612)
N1: (-1.492,100.378,94.463)
N3: (0.265,101.629,95.551)
N6: (-3.676,100.312,95.200)
N7: (-2.698,102.152,97.489)
N9: (-0.552,102.817,97.508)
O5': (-1.774,105.437,100.121)
O3': (0.465,107.160,97.704)
Image (generated by PyMOL):