Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.377 88.216 114.486 1.00 69.02 O
ATOM 2 P A A 575 -13.022 88.743 113.010 1.00 68.88 P
ATOM 3 OP1 A A 575 -12.428 90.100 113.143 1.00 69.03 O
ATOM 4 OP2 A A 575 -14.238 88.555 112.179 1.00 69.80 O
ATOM 5 O5' A A 575 -11.912 87.731 112.477 1.00 67.26 O
ATOM 6 C5' A A 575 -11.720 87.534 111.059 1.00 67.07 C
ATOM 7 C4' A A 575 -10.266 87.242 110.747 1.00 65.49 C
ATOM 8 O4' A A 575 -9.449 88.354 111.206 1.00 64.85 O
ATOM 9 C3' A A 575 -9.660 85.990 111.371 1.00 65.57 C
ATOM 10 O3' A A 575 -8.719 85.448 110.454 1.00 65.81 O
ATOM 11 C2' A A 575 -8.953 86.542 112.608 1.00 65.70 C
ATOM 12 O2' A A 575 -7.871 85.738 113.040 1.00 66.43 O
ATOM 13 C1' A A 575 -8.449 87.883 112.085 1.00 64.03 C
ATOM 14 N9 A A 575 -8.210 88.910 113.101 1.00 62.92 N
ATOM 15 C8 A A 575 -9.135 89.657 113.788 1.00 62.88 C
ATOM 16 N7 A A 575 -8.605 90.536 114.605 1.00 61.93 N
ATOM 17 C5 A A 575 -7.238 90.350 114.455 1.00 61.87 C
ATOM 18 C6 A A 575 -6.124 90.982 115.044 1.00 61.60 C
ATOM 19 N6 A A 575 -6.216 91.962 115.945 1.00 61.24 N
ATOM 20 N1 A A 575 -4.896 90.564 114.670 1.00 61.73 N
ATOM 21 C2 A A 575 -4.802 89.574 113.772 1.00 62.77 C
ATOM 22 N3 A A 575 -5.769 88.902 113.151 1.00 62.61 N
ATOM 23 C4 A A 575 -6.979 89.345 113.539 1.00 62.96 C
ATOM 24 P G A 576 -9.116 84.170 109.565 1.00 69.24 P
ATOM 25 OP1 G A 576 -10.595 84.037 109.605 1.00 72.71 O
ATOM 26 OP2 G A 576 -8.264 83.020 109.962 1.00 69.49 O
ATOM 27 O5' G A 576 -8.744 84.588 108.072 1.00 69.53 O
TER
ATOM 1 O3' A B 557 -2.411 94.394 117.498 1.00 57.92 O
ATOM 2 P C B 558 -3.309 93.988 118.766 1.00 59.68 P
ATOM 3 OP1 C B 558 -2.389 93.521 119.838 1.00 60.00 O
ATOM 4 OP2 C B 558 -4.400 93.089 118.292 1.00 58.69 O
ATOM 5 O5' C B 558 -3.939 95.378 119.215 1.00 58.27 O
ATOM 6 C5' C B 558 -3.087 96.503 119.481 1.00 60.39 C
ATOM 7 C4' C B 558 -3.908 97.751 119.661 1.00 62.96 C
ATOM 8 O4' C B 558 -4.701 97.973 118.466 1.00 62.90 O
ATOM 9 C3' C B 558 -4.936 97.704 120.779 1.00 63.77 C
ATOM 10 O3' C B 558 -4.360 97.995 122.045 1.00 66.89 O
ATOM 11 C2' C B 558 -5.923 98.773 120.340 1.00 63.49 C
ATOM 12 O2' C B 558 -5.444 100.079 120.595 1.00 64.64 O
ATOM 13 C1' C B 558 -5.956 98.534 118.829 1.00 62.75 C
ATOM 14 N1 C B 558 -7.026 97.602 118.414 1.00 61.44 N
ATOM 15 C2 C B 558 -8.340 98.083 118.314 1.00 60.69 C
ATOM 16 O2 C B 558 -8.575 99.269 118.611 1.00 63.39 O
ATOM 17 N3 C B 558 -9.319 97.246 117.905 1.00 58.90 N
ATOM 18 C4 C B 558 -9.034 95.976 117.616 1.00 59.10 C
ATOM 19 N4 C B 558 -10.036 95.184 117.215 1.00 57.25 N
ATOM 20 C5 C B 558 -7.711 95.457 117.724 1.00 59.72 C
ATOM 21 C6 C B 558 -6.748 96.295 118.122 1.00 60.10 C
ATOM 22 P C B 559 -4.791 97.130 123.331 1.00 67.66 P
ATOM 23 OP1 C B 559 -4.234 97.811 124.527 1.00 68.26 O
ATOM 24 OP2 C B 559 -4.467 95.701 123.079 1.00 66.37 O
ATOM 25 O5' C B 559 -6.375 97.273 123.370 1.00 69.50 O
TER
ATOM 2 P A A 575 -13.022 88.743 113.010 1.00 68.88 P
ATOM 3 OP1 A A 575 -12.428 90.100 113.143 1.00 69.03 O
ATOM 4 OP2 A A 575 -14.238 88.555 112.179 1.00 69.80 O
ATOM 5 O5' A A 575 -11.912 87.731 112.477 1.00 67.26 O
ATOM 6 C5' A A 575 -11.720 87.534 111.059 1.00 67.07 C
ATOM 7 C4' A A 575 -10.266 87.242 110.747 1.00 65.49 C
ATOM 8 O4' A A 575 -9.449 88.354 111.206 1.00 64.85 O
ATOM 9 C3' A A 575 -9.660 85.990 111.371 1.00 65.57 C
ATOM 10 O3' A A 575 -8.719 85.448 110.454 1.00 65.81 O
ATOM 11 C2' A A 575 -8.953 86.542 112.608 1.00 65.70 C
ATOM 12 O2' A A 575 -7.871 85.738 113.040 1.00 66.43 O
ATOM 13 C1' A A 575 -8.449 87.883 112.085 1.00 64.03 C
ATOM 14 N9 A A 575 -8.210 88.910 113.101 1.00 62.92 N
ATOM 15 C8 A A 575 -9.135 89.657 113.788 1.00 62.88 C
ATOM 16 N7 A A 575 -8.605 90.536 114.605 1.00 61.93 N
ATOM 17 C5 A A 575 -7.238 90.350 114.455 1.00 61.87 C
ATOM 18 C6 A A 575 -6.124 90.982 115.044 1.00 61.60 C
ATOM 19 N6 A A 575 -6.216 91.962 115.945 1.00 61.24 N
ATOM 20 N1 A A 575 -4.896 90.564 114.670 1.00 61.73 N
ATOM 21 C2 A A 575 -4.802 89.574 113.772 1.00 62.77 C
ATOM 22 N3 A A 575 -5.769 88.902 113.151 1.00 62.61 N
ATOM 23 C4 A A 575 -6.979 89.345 113.539 1.00 62.96 C
ATOM 24 P G A 576 -9.116 84.170 109.565 1.00 69.24 P
ATOM 25 OP1 G A 576 -10.595 84.037 109.605 1.00 72.71 O
ATOM 26 OP2 G A 576 -8.264 83.020 109.962 1.00 69.49 O
ATOM 27 O5' G A 576 -8.744 84.588 108.072 1.00 69.53 O
TER
ATOM 1 O3' A B 557 -2.411 94.394 117.498 1.00 57.92 O
ATOM 2 P C B 558 -3.309 93.988 118.766 1.00 59.68 P
ATOM 3 OP1 C B 558 -2.389 93.521 119.838 1.00 60.00 O
ATOM 4 OP2 C B 558 -4.400 93.089 118.292 1.00 58.69 O
ATOM 5 O5' C B 558 -3.939 95.378 119.215 1.00 58.27 O
ATOM 6 C5' C B 558 -3.087 96.503 119.481 1.00 60.39 C
ATOM 7 C4' C B 558 -3.908 97.751 119.661 1.00 62.96 C
ATOM 8 O4' C B 558 -4.701 97.973 118.466 1.00 62.90 O
ATOM 9 C3' C B 558 -4.936 97.704 120.779 1.00 63.77 C
ATOM 10 O3' C B 558 -4.360 97.995 122.045 1.00 66.89 O
ATOM 11 C2' C B 558 -5.923 98.773 120.340 1.00 63.49 C
ATOM 12 O2' C B 558 -5.444 100.079 120.595 1.00 64.64 O
ATOM 13 C1' C B 558 -5.956 98.534 118.829 1.00 62.75 C
ATOM 14 N1 C B 558 -7.026 97.602 118.414 1.00 61.44 N
ATOM 15 C2 C B 558 -8.340 98.083 118.314 1.00 60.69 C
ATOM 16 O2 C B 558 -8.575 99.269 118.611 1.00 63.39 O
ATOM 17 N3 C B 558 -9.319 97.246 117.905 1.00 58.90 N
ATOM 18 C4 C B 558 -9.034 95.976 117.616 1.00 59.10 C
ATOM 19 N4 C B 558 -10.036 95.184 117.215 1.00 57.25 N
ATOM 20 C5 C B 558 -7.711 95.457 117.724 1.00 59.72 C
ATOM 21 C6 C B 558 -6.748 96.295 118.122 1.00 60.10 C
ATOM 22 P C B 559 -4.791 97.130 123.331 1.00 67.66 P
ATOM 23 OP1 C B 559 -4.234 97.811 124.527 1.00 68.26 O
ATOM 24 OP2 C B 559 -4.467 95.701 123.079 1.00 66.37 O
ATOM 25 O5' C B 559 -6.375 97.273 123.370 1.00 69.50 O
TER
Atoms:
OP1: (-12.428,90.100,113.143)
OP2: (-14.238,88.555,112.179)
C3': (-9.660,85.990,111.371)
C1': (-8.449,87.883,112.085)
C5': (-11.720,87.534,111.059)
O4': (-9.449,88.354,111.206)
C8: (-9.135,89.657,113.788)
O2': (-7.871,85.738,113.040)
C6: (-6.124,90.982,115.044)
C5: (-7.238,90.350,114.455)
C4: (-6.979,89.345,113.539)
P: (-13.022,88.743,113.010)
C4': (-10.266,87.242,110.747)
C2': (-8.953,86.542,112.608)
C2: (-4.802,89.574,113.772)
N1: (-4.896,90.564,114.670)
N3: (-5.769,88.902,113.151)
N6: (-6.216,91.962,115.945)
N7: (-8.605,90.536,114.605)
N9: (-8.210,88.910,113.101)
O5': (-11.912,87.731,112.477)
O3': (-8.719,85.448,110.454)
OP2: (-14.238,88.555,112.179)
C3': (-9.660,85.990,111.371)
C1': (-8.449,87.883,112.085)
C5': (-11.720,87.534,111.059)
O4': (-9.449,88.354,111.206)
C8: (-9.135,89.657,113.788)
O2': (-7.871,85.738,113.040)
C6: (-6.124,90.982,115.044)
C5: (-7.238,90.350,114.455)
C4: (-6.979,89.345,113.539)
P: (-13.022,88.743,113.010)
C4': (-10.266,87.242,110.747)
C2': (-8.953,86.542,112.608)
C2: (-4.802,89.574,113.772)
N1: (-4.896,90.564,114.670)
N3: (-5.769,88.902,113.151)
N6: (-6.216,91.962,115.945)
N7: (-8.605,90.536,114.605)
N9: (-8.210,88.910,113.101)
O5': (-11.912,87.731,112.477)
O3': (-8.719,85.448,110.454)
C2: (-8.340,98.083,118.314)
OP1: (-2.389,93.521,119.838)
OP2: (-4.400,93.089,118.292)
C4: (-9.034,95.976,117.616)
O5': (-3.939,95.378,119.215)
C3': (-4.936,97.704,120.779)
C1': (-5.956,98.534,118.829)
O4': (-4.701,97.973,118.466)
C5': (-3.087,96.503,119.481)
P: (-3.309,93.988,118.766)
O2: (-8.575,99.269,118.611)
C4': (-3.908,97.751,119.661)
C2': (-5.923,98.773,120.340)
O2': (-5.444,100.079,120.595)
N1: (-7.026,97.602,118.414)
N3: (-9.319,97.246,117.905)
N4: (-10.036,95.184,117.215)
C6: (-6.748,96.295,118.122)
C5: (-7.711,95.457,117.724)
O3': (-4.360,97.995,122.045)
OP1: (-2.389,93.521,119.838)
OP2: (-4.400,93.089,118.292)
C4: (-9.034,95.976,117.616)
O5': (-3.939,95.378,119.215)
C3': (-4.936,97.704,120.779)
C1': (-5.956,98.534,118.829)
O4': (-4.701,97.973,118.466)
C5': (-3.087,96.503,119.481)
P: (-3.309,93.988,118.766)
O2: (-8.575,99.269,118.611)
C4': (-3.908,97.751,119.661)
C2': (-5.923,98.773,120.340)
O2': (-5.444,100.079,120.595)
N1: (-7.026,97.602,118.414)
N3: (-9.319,97.246,117.905)
N4: (-10.036,95.184,117.215)
C6: (-6.748,96.295,118.122)
C5: (-7.711,95.457,117.724)
O3': (-4.360,97.995,122.045)
Image (generated by PyMOL):