Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.356 88.224 114.423 1.00 75.41 O
ATOM 2 P A A 575 -13.026 88.712 112.927 1.00 75.97 P
ATOM 3 OP1 A A 575 -12.438 90.074 113.012 1.00 76.42 O
ATOM 4 OP2 A A 575 -14.256 88.493 112.123 1.00 76.76 O
ATOM 5 O5' A A 575 -11.924 87.694 112.388 1.00 74.07 O
ATOM 6 C5' A A 575 -11.782 87.454 110.970 1.00 73.84 C
ATOM 7 C4' A A 575 -10.336 87.175 110.613 1.00 72.20 C
ATOM 8 O4' A A 575 -9.515 88.293 111.050 1.00 71.50 O
ATOM 9 C3' A A 575 -9.704 85.930 111.219 1.00 71.70 C
ATOM 10 O3' A A 575 -8.756 85.430 110.287 1.00 73.07 O
ATOM 11 C2' A A 575 -8.994 86.484 112.454 1.00 71.97 C
ATOM 12 O2' A A 575 -7.897 85.688 112.866 1.00 71.85 O
ATOM 13 C1' A A 575 -8.512 87.837 111.937 1.00 70.56 C
ATOM 14 N9 A A 575 -8.299 88.871 112.954 1.00 69.24 N
ATOM 15 C8 A A 575 -9.249 89.614 113.612 1.00 69.62 C
ATOM 16 N7 A A 575 -8.750 90.509 114.431 1.00 68.16 N
ATOM 17 C5 A A 575 -7.379 90.337 114.317 1.00 67.43 C
ATOM 18 C6 A A 575 -6.290 90.992 114.925 1.00 67.84 C
ATOM 19 N6 A A 575 -6.420 91.986 115.810 1.00 67.37 N
ATOM 20 N1 A A 575 -5.047 90.585 114.589 1.00 67.35 N
ATOM 21 C2 A A 575 -4.917 89.583 113.707 1.00 68.12 C
ATOM 22 N3 A A 575 -5.860 88.888 113.072 1.00 67.92 N
ATOM 23 C4 A A 575 -7.085 89.322 113.422 1.00 68.79 C
ATOM 24 P G A 576 -9.068 84.081 109.472 1.00 76.09 P
ATOM 25 OP1 G A 576 -10.527 83.823 109.550 1.00 78.67 O
ATOM 26 OP2 G A 576 -8.114 83.036 109.922 1.00 77.57 O
ATOM 27 O5' G A 576 -8.742 84.449 107.953 1.00 76.42 O
TER
ATOM 1 O3' A B 557 -2.450 94.329 117.383 1.00 65.63 O
ATOM 2 P C B 558 -3.343 93.926 118.657 1.00 67.72 P
ATOM 3 OP1 C B 558 -2.412 93.454 119.718 1.00 67.81 O
ATOM 4 OP2 C B 558 -4.435 93.029 118.188 1.00 67.04 O
ATOM 5 O5' C B 558 -3.968 95.319 119.117 1.00 65.64 O
ATOM 6 C5' C B 558 -3.110 96.440 119.386 1.00 67.85 C
ATOM 7 C4' C B 558 -3.922 97.698 119.564 1.00 70.02 C
ATOM 8 O4' C B 558 -4.709 97.928 118.368 1.00 70.48 O
ATOM 9 C3' C B 558 -4.947 97.675 120.685 1.00 70.99 C
ATOM 10 O3' C B 558 -4.362 97.988 121.944 1.00 73.57 O
ATOM 11 C2' C B 558 -5.929 98.743 120.236 1.00 70.33 C
ATOM 12 O2' C B 558 -5.441 100.046 120.482 1.00 71.30 O
ATOM 13 C1' C B 558 -5.961 98.495 118.727 1.00 69.72 C
ATOM 14 N1 C B 558 -7.033 97.569 118.304 1.00 68.27 N
ATOM 15 C2 C B 558 -8.351 98.045 118.224 1.00 67.79 C
ATOM 16 O2 C B 558 -8.590 99.227 118.541 1.00 70.16 O
ATOM 17 N3 C B 558 -9.330 97.206 117.811 1.00 66.42 N
ATOM 18 C4 C B 558 -9.039 95.942 117.498 1.00 65.63 C
ATOM 19 N4 C B 558 -10.036 95.149 117.099 1.00 64.12 N
ATOM 20 C5 C B 558 -7.713 95.431 117.581 1.00 67.00 C
ATOM 21 C6 C B 558 -6.751 96.269 117.986 1.00 67.30 C
ATOM 22 P C B 559 -4.774 97.139 123.246 1.00 75.60 P
ATOM 23 OP1 C B 559 -4.196 97.826 124.431 1.00 75.11 O
ATOM 24 OP2 C B 559 -4.462 95.703 122.998 1.00 73.43 O
ATOM 25 O5' C B 559 -6.355 97.302 123.319 1.00 76.40 O
TER
ATOM 2 P A A 575 -13.026 88.712 112.927 1.00 75.97 P
ATOM 3 OP1 A A 575 -12.438 90.074 113.012 1.00 76.42 O
ATOM 4 OP2 A A 575 -14.256 88.493 112.123 1.00 76.76 O
ATOM 5 O5' A A 575 -11.924 87.694 112.388 1.00 74.07 O
ATOM 6 C5' A A 575 -11.782 87.454 110.970 1.00 73.84 C
ATOM 7 C4' A A 575 -10.336 87.175 110.613 1.00 72.20 C
ATOM 8 O4' A A 575 -9.515 88.293 111.050 1.00 71.50 O
ATOM 9 C3' A A 575 -9.704 85.930 111.219 1.00 71.70 C
ATOM 10 O3' A A 575 -8.756 85.430 110.287 1.00 73.07 O
ATOM 11 C2' A A 575 -8.994 86.484 112.454 1.00 71.97 C
ATOM 12 O2' A A 575 -7.897 85.688 112.866 1.00 71.85 O
ATOM 13 C1' A A 575 -8.512 87.837 111.937 1.00 70.56 C
ATOM 14 N9 A A 575 -8.299 88.871 112.954 1.00 69.24 N
ATOM 15 C8 A A 575 -9.249 89.614 113.612 1.00 69.62 C
ATOM 16 N7 A A 575 -8.750 90.509 114.431 1.00 68.16 N
ATOM 17 C5 A A 575 -7.379 90.337 114.317 1.00 67.43 C
ATOM 18 C6 A A 575 -6.290 90.992 114.925 1.00 67.84 C
ATOM 19 N6 A A 575 -6.420 91.986 115.810 1.00 67.37 N
ATOM 20 N1 A A 575 -5.047 90.585 114.589 1.00 67.35 N
ATOM 21 C2 A A 575 -4.917 89.583 113.707 1.00 68.12 C
ATOM 22 N3 A A 575 -5.860 88.888 113.072 1.00 67.92 N
ATOM 23 C4 A A 575 -7.085 89.322 113.422 1.00 68.79 C
ATOM 24 P G A 576 -9.068 84.081 109.472 1.00 76.09 P
ATOM 25 OP1 G A 576 -10.527 83.823 109.550 1.00 78.67 O
ATOM 26 OP2 G A 576 -8.114 83.036 109.922 1.00 77.57 O
ATOM 27 O5' G A 576 -8.742 84.449 107.953 1.00 76.42 O
TER
ATOM 1 O3' A B 557 -2.450 94.329 117.383 1.00 65.63 O
ATOM 2 P C B 558 -3.343 93.926 118.657 1.00 67.72 P
ATOM 3 OP1 C B 558 -2.412 93.454 119.718 1.00 67.81 O
ATOM 4 OP2 C B 558 -4.435 93.029 118.188 1.00 67.04 O
ATOM 5 O5' C B 558 -3.968 95.319 119.117 1.00 65.64 O
ATOM 6 C5' C B 558 -3.110 96.440 119.386 1.00 67.85 C
ATOM 7 C4' C B 558 -3.922 97.698 119.564 1.00 70.02 C
ATOM 8 O4' C B 558 -4.709 97.928 118.368 1.00 70.48 O
ATOM 9 C3' C B 558 -4.947 97.675 120.685 1.00 70.99 C
ATOM 10 O3' C B 558 -4.362 97.988 121.944 1.00 73.57 O
ATOM 11 C2' C B 558 -5.929 98.743 120.236 1.00 70.33 C
ATOM 12 O2' C B 558 -5.441 100.046 120.482 1.00 71.30 O
ATOM 13 C1' C B 558 -5.961 98.495 118.727 1.00 69.72 C
ATOM 14 N1 C B 558 -7.033 97.569 118.304 1.00 68.27 N
ATOM 15 C2 C B 558 -8.351 98.045 118.224 1.00 67.79 C
ATOM 16 O2 C B 558 -8.590 99.227 118.541 1.00 70.16 O
ATOM 17 N3 C B 558 -9.330 97.206 117.811 1.00 66.42 N
ATOM 18 C4 C B 558 -9.039 95.942 117.498 1.00 65.63 C
ATOM 19 N4 C B 558 -10.036 95.149 117.099 1.00 64.12 N
ATOM 20 C5 C B 558 -7.713 95.431 117.581 1.00 67.00 C
ATOM 21 C6 C B 558 -6.751 96.269 117.986 1.00 67.30 C
ATOM 22 P C B 559 -4.774 97.139 123.246 1.00 75.60 P
ATOM 23 OP1 C B 559 -4.196 97.826 124.431 1.00 75.11 O
ATOM 24 OP2 C B 559 -4.462 95.703 122.998 1.00 73.43 O
ATOM 25 O5' C B 559 -6.355 97.302 123.319 1.00 76.40 O
TER
Atoms:
OP1: (-12.438,90.074,113.012)
OP2: (-14.256,88.493,112.123)
C3': (-9.704,85.930,111.219)
C1': (-8.512,87.837,111.937)
C5': (-11.782,87.454,110.970)
O4': (-9.515,88.293,111.050)
C8: (-9.249,89.614,113.612)
O2': (-7.897,85.688,112.866)
C6: (-6.290,90.992,114.925)
C5: (-7.379,90.337,114.317)
C4: (-7.085,89.322,113.422)
P: (-13.026,88.712,112.927)
C4': (-10.336,87.175,110.613)
C2': (-8.994,86.484,112.454)
C2: (-4.917,89.583,113.707)
N1: (-5.047,90.585,114.589)
N3: (-5.860,88.888,113.072)
N6: (-6.420,91.986,115.810)
N7: (-8.750,90.509,114.431)
N9: (-8.299,88.871,112.954)
O5': (-11.924,87.694,112.388)
O3': (-8.756,85.430,110.287)
OP2: (-14.256,88.493,112.123)
C3': (-9.704,85.930,111.219)
C1': (-8.512,87.837,111.937)
C5': (-11.782,87.454,110.970)
O4': (-9.515,88.293,111.050)
C8: (-9.249,89.614,113.612)
O2': (-7.897,85.688,112.866)
C6: (-6.290,90.992,114.925)
C5: (-7.379,90.337,114.317)
C4: (-7.085,89.322,113.422)
P: (-13.026,88.712,112.927)
C4': (-10.336,87.175,110.613)
C2': (-8.994,86.484,112.454)
C2: (-4.917,89.583,113.707)
N1: (-5.047,90.585,114.589)
N3: (-5.860,88.888,113.072)
N6: (-6.420,91.986,115.810)
N7: (-8.750,90.509,114.431)
N9: (-8.299,88.871,112.954)
O5': (-11.924,87.694,112.388)
O3': (-8.756,85.430,110.287)
C2: (-8.351,98.045,118.224)
OP1: (-2.412,93.454,119.718)
OP2: (-4.435,93.029,118.188)
C4: (-9.039,95.942,117.498)
O5': (-3.968,95.319,119.117)
C3': (-4.947,97.675,120.685)
C1': (-5.961,98.495,118.727)
O4': (-4.709,97.928,118.368)
C5': (-3.110,96.440,119.386)
P: (-3.343,93.926,118.657)
O2: (-8.590,99.227,118.541)
C4': (-3.922,97.698,119.564)
C2': (-5.929,98.743,120.236)
O2': (-5.441,100.046,120.482)
N1: (-7.033,97.569,118.304)
N3: (-9.330,97.206,117.811)
N4: (-10.036,95.149,117.099)
C6: (-6.751,96.269,117.986)
C5: (-7.713,95.431,117.581)
O3': (-4.362,97.988,121.944)
OP1: (-2.412,93.454,119.718)
OP2: (-4.435,93.029,118.188)
C4: (-9.039,95.942,117.498)
O5': (-3.968,95.319,119.117)
C3': (-4.947,97.675,120.685)
C1': (-5.961,98.495,118.727)
O4': (-4.709,97.928,118.368)
C5': (-3.110,96.440,119.386)
P: (-3.343,93.926,118.657)
O2: (-8.590,99.227,118.541)
C4': (-3.922,97.698,119.564)
C2': (-5.929,98.743,120.236)
O2': (-5.441,100.046,120.482)
N1: (-7.033,97.569,118.304)
N3: (-9.330,97.206,117.811)
N4: (-10.036,95.149,117.099)
C6: (-6.751,96.269,117.986)
C5: (-7.713,95.431,117.581)
O3': (-4.362,97.988,121.944)
Image (generated by PyMOL):