Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:A79:A80
Extra
PDB:
ATOM 1 O3' G A 78 6.821 -40.576 3.336 1.00103.13 O
ATOM 2 P G A 79 5.653 -39.511 3.110 1.00102.95 P
ATOM 3 OP1 G A 79 4.652 -40.109 2.187 1.00104.11 O
ATOM 4 OP2 G A 79 6.298 -38.210 2.796 1.00102.46 O
ATOM 5 O5' G A 79 5.001 -39.390 4.565 1.00100.70 O
ATOM 6 C5' G A 79 4.182 -40.439 5.079 1.00 99.87 C
ATOM 7 C4' G A 79 3.813 -40.152 6.519 1.00 97.66 C
ATOM 8 O4' G A 79 5.021 -40.022 7.313 1.00 96.89 O
ATOM 9 C3' G A 79 3.098 -38.831 6.739 1.00 96.63 C
ATOM 10 O3' G A 79 1.712 -38.923 6.406 1.00 96.53 O
ATOM 11 C2' G A 79 3.383 -38.602 8.220 1.00 95.40 C
ATOM 12 O2' G A 79 2.623 -39.440 9.068 1.00 95.14 O
ATOM 13 C1' G A 79 4.856 -39.003 8.284 1.00 95.53 C
ATOM 14 N9 G A 79 5.801 -37.911 8.014 1.00 95.33 N
ATOM 15 C8 G A 79 6.363 -37.582 6.802 1.00 96.14 C
ATOM 16 N7 G A 79 7.171 -36.561 6.853 1.00 95.86 N
ATOM 17 C5 G A 79 7.149 -36.179 8.185 1.00 94.72 C
ATOM 18 C6 G A 79 7.837 -35.124 8.840 1.00 94.39 C
ATOM 19 O6 G A 79 8.620 -34.294 8.354 1.00 94.96 O
ATOM 20 N1 G A 79 7.542 -35.073 10.201 1.00 93.80 N
ATOM 21 C2 G A 79 6.686 -35.941 10.845 1.00 93.77 C
ATOM 22 N2 G A 79 6.523 -35.739 12.162 1.00 93.57 N
ATOM 23 N3 G A 79 6.034 -36.935 10.242 1.00 93.78 N
ATOM 24 C4 G A 79 6.311 -36.999 8.914 1.00 94.40 C
ATOM 25 P A A 80 1.159 -38.135 5.121 1.00 97.02 P
ATOM 26 OP1 A A 80 1.434 -38.933 3.904 1.00 98.59 O
ATOM 27 OP2 A A 80 1.648 -36.740 5.190 1.00 96.84 O
ATOM 28 O5' A A 80 -0.414 -38.117 5.388 1.00 96.09 O
TER
ATOM 1 O3' G B 79 1.712 -38.923 6.406 1.00 96.53 O
ATOM 2 P A B 80 1.159 -38.135 5.121 1.00 97.02 P
ATOM 3 OP1 A B 80 1.434 -38.933 3.904 1.00 98.59 O
ATOM 4 OP2 A B 80 1.648 -36.740 5.190 1.00 96.84 O
ATOM 5 O5' A B 80 -0.414 -38.117 5.388 1.00 96.09 O
ATOM 6 C5' A B 80 -1.178 -39.304 5.261 1.00 95.75 C
ATOM 7 C4' A B 80 -2.189 -39.390 6.382 1.00 93.91 C
ATOM 8 O4' A B 80 -1.487 -39.453 7.646 1.00 92.68 O
ATOM 9 C3' A B 80 -3.089 -38.177 6.541 1.00 92.87 C
ATOM 10 O3' A B 80 -4.174 -38.215 5.640 1.00 93.48 O
ATOM 11 C2' A B 80 -3.532 -38.331 7.987 1.00 91.60 C
ATOM 12 O2' A B 80 -4.483 -39.362 8.167 1.00 91.60 O
ATOM 13 C1' A B 80 -2.199 -38.710 8.617 1.00 91.50 C
ATOM 14 N9 A B 80 -1.415 -37.541 9.011 1.00 91.43 N
ATOM 15 C8 A B 80 -0.373 -36.959 8.332 1.00 92.03 C
ATOM 16 N7 A B 80 0.139 -35.909 8.929 1.00 91.29 N
ATOM 17 C5 A B 80 -0.622 -35.794 10.081 1.00 90.50 C
ATOM 18 C6 A B 80 -0.588 -34.879 11.152 1.00 89.82 C
ATOM 19 N6 A B 80 0.288 -33.873 11.219 1.00 90.13 N
ATOM 20 N1 A B 80 -1.482 -35.041 12.153 1.00 89.16 N
ATOM 21 C2 A B 80 -2.358 -36.053 12.083 1.00 89.19 C
ATOM 22 N3 A B 80 -2.487 -36.976 11.128 1.00 89.81 N
ATOM 23 C4 A B 80 -1.583 -36.788 10.149 1.00 90.48 C
ATOM 24 P C B 81 -4.324 -37.057 4.547 1.00 94.07 P
ATOM 25 OP1 C B 81 -5.589 -37.292 3.813 1.00 95.17 O
ATOM 26 OP2 C B 81 -3.042 -36.959 3.813 1.00 94.49 O
ATOM 27 O5' C B 81 -4.484 -35.722 5.412 1.00 92.61 O
TER
ATOM 2 P G A 79 5.653 -39.511 3.110 1.00102.95 P
ATOM 3 OP1 G A 79 4.652 -40.109 2.187 1.00104.11 O
ATOM 4 OP2 G A 79 6.298 -38.210 2.796 1.00102.46 O
ATOM 5 O5' G A 79 5.001 -39.390 4.565 1.00100.70 O
ATOM 6 C5' G A 79 4.182 -40.439 5.079 1.00 99.87 C
ATOM 7 C4' G A 79 3.813 -40.152 6.519 1.00 97.66 C
ATOM 8 O4' G A 79 5.021 -40.022 7.313 1.00 96.89 O
ATOM 9 C3' G A 79 3.098 -38.831 6.739 1.00 96.63 C
ATOM 10 O3' G A 79 1.712 -38.923 6.406 1.00 96.53 O
ATOM 11 C2' G A 79 3.383 -38.602 8.220 1.00 95.40 C
ATOM 12 O2' G A 79 2.623 -39.440 9.068 1.00 95.14 O
ATOM 13 C1' G A 79 4.856 -39.003 8.284 1.00 95.53 C
ATOM 14 N9 G A 79 5.801 -37.911 8.014 1.00 95.33 N
ATOM 15 C8 G A 79 6.363 -37.582 6.802 1.00 96.14 C
ATOM 16 N7 G A 79 7.171 -36.561 6.853 1.00 95.86 N
ATOM 17 C5 G A 79 7.149 -36.179 8.185 1.00 94.72 C
ATOM 18 C6 G A 79 7.837 -35.124 8.840 1.00 94.39 C
ATOM 19 O6 G A 79 8.620 -34.294 8.354 1.00 94.96 O
ATOM 20 N1 G A 79 7.542 -35.073 10.201 1.00 93.80 N
ATOM 21 C2 G A 79 6.686 -35.941 10.845 1.00 93.77 C
ATOM 22 N2 G A 79 6.523 -35.739 12.162 1.00 93.57 N
ATOM 23 N3 G A 79 6.034 -36.935 10.242 1.00 93.78 N
ATOM 24 C4 G A 79 6.311 -36.999 8.914 1.00 94.40 C
ATOM 25 P A A 80 1.159 -38.135 5.121 1.00 97.02 P
ATOM 26 OP1 A A 80 1.434 -38.933 3.904 1.00 98.59 O
ATOM 27 OP2 A A 80 1.648 -36.740 5.190 1.00 96.84 O
ATOM 28 O5' A A 80 -0.414 -38.117 5.388 1.00 96.09 O
TER
ATOM 1 O3' G B 79 1.712 -38.923 6.406 1.00 96.53 O
ATOM 2 P A B 80 1.159 -38.135 5.121 1.00 97.02 P
ATOM 3 OP1 A B 80 1.434 -38.933 3.904 1.00 98.59 O
ATOM 4 OP2 A B 80 1.648 -36.740 5.190 1.00 96.84 O
ATOM 5 O5' A B 80 -0.414 -38.117 5.388 1.00 96.09 O
ATOM 6 C5' A B 80 -1.178 -39.304 5.261 1.00 95.75 C
ATOM 7 C4' A B 80 -2.189 -39.390 6.382 1.00 93.91 C
ATOM 8 O4' A B 80 -1.487 -39.453 7.646 1.00 92.68 O
ATOM 9 C3' A B 80 -3.089 -38.177 6.541 1.00 92.87 C
ATOM 10 O3' A B 80 -4.174 -38.215 5.640 1.00 93.48 O
ATOM 11 C2' A B 80 -3.532 -38.331 7.987 1.00 91.60 C
ATOM 12 O2' A B 80 -4.483 -39.362 8.167 1.00 91.60 O
ATOM 13 C1' A B 80 -2.199 -38.710 8.617 1.00 91.50 C
ATOM 14 N9 A B 80 -1.415 -37.541 9.011 1.00 91.43 N
ATOM 15 C8 A B 80 -0.373 -36.959 8.332 1.00 92.03 C
ATOM 16 N7 A B 80 0.139 -35.909 8.929 1.00 91.29 N
ATOM 17 C5 A B 80 -0.622 -35.794 10.081 1.00 90.50 C
ATOM 18 C6 A B 80 -0.588 -34.879 11.152 1.00 89.82 C
ATOM 19 N6 A B 80 0.288 -33.873 11.219 1.00 90.13 N
ATOM 20 N1 A B 80 -1.482 -35.041 12.153 1.00 89.16 N
ATOM 21 C2 A B 80 -2.358 -36.053 12.083 1.00 89.19 C
ATOM 22 N3 A B 80 -2.487 -36.976 11.128 1.00 89.81 N
ATOM 23 C4 A B 80 -1.583 -36.788 10.149 1.00 90.48 C
ATOM 24 P C B 81 -4.324 -37.057 4.547 1.00 94.07 P
ATOM 25 OP1 C B 81 -5.589 -37.292 3.813 1.00 95.17 O
ATOM 26 OP2 C B 81 -3.042 -36.959 3.813 1.00 94.49 O
ATOM 27 O5' C B 81 -4.484 -35.722 5.412 1.00 92.61 O
TER
Atoms:
OP1: (4.652,-40.109,2.187)
OP2: (6.298,-38.210,2.796)
C3': (3.098,-38.831,6.739)
C1': (4.856,-39.003,8.284)
C5': (4.182,-40.439,5.079)
O6: (8.620,-34.294,8.354)
O4': (5.021,-40.022,7.313)
C8: (6.363,-37.582,6.802)
C2: (6.686,-35.941,10.845)
C6: (7.837,-35.124,8.840)
C5: (7.149,-36.179,8.185)
C4: (6.311,-36.999,8.914)
P: (5.653,-39.511,3.110)
C4': (3.813,-40.152,6.519)
C2': (3.383,-38.602,8.220)
O2': (2.623,-39.440,9.068)
N1: (7.542,-35.073,10.201)
N2: (6.523,-35.739,12.162)
N3: (6.034,-36.935,10.242)
N7: (7.171,-36.561,6.853)
N9: (5.801,-37.911,8.014)
O5': (5.001,-39.390,4.565)
O3': (1.712,-38.923,6.406)
OP2: (6.298,-38.210,2.796)
C3': (3.098,-38.831,6.739)
C1': (4.856,-39.003,8.284)
C5': (4.182,-40.439,5.079)
O6: (8.620,-34.294,8.354)
O4': (5.021,-40.022,7.313)
C8: (6.363,-37.582,6.802)
C2: (6.686,-35.941,10.845)
C6: (7.837,-35.124,8.840)
C5: (7.149,-36.179,8.185)
C4: (6.311,-36.999,8.914)
P: (5.653,-39.511,3.110)
C4': (3.813,-40.152,6.519)
C2': (3.383,-38.602,8.220)
O2': (2.623,-39.440,9.068)
N1: (7.542,-35.073,10.201)
N2: (6.523,-35.739,12.162)
N3: (6.034,-36.935,10.242)
N7: (7.171,-36.561,6.853)
N9: (5.801,-37.911,8.014)
O5': (5.001,-39.390,4.565)
O3': (1.712,-38.923,6.406)
OP1: (1.434,-38.933,3.904)
OP2: (1.648,-36.740,5.190)
C3': (-3.089,-38.177,6.541)
C1': (-2.199,-38.710,8.617)
C5': (-1.178,-39.304,5.261)
O4': (-1.487,-39.453,7.646)
C8: (-0.373,-36.959,8.332)
O2': (-4.483,-39.362,8.167)
C6: (-0.588,-34.879,11.152)
C5: (-0.622,-35.794,10.081)
C4: (-1.583,-36.788,10.149)
P: (1.159,-38.135,5.121)
C4': (-2.189,-39.390,6.382)
C2': (-3.532,-38.331,7.987)
C2: (-2.358,-36.053,12.083)
N1: (-1.482,-35.041,12.153)
N3: (-2.487,-36.976,11.128)
N6: (0.288,-33.873,11.219)
N7: (0.139,-35.909,8.929)
N9: (-1.415,-37.541,9.011)
O5': (-0.414,-38.117,5.388)
O3': (-4.174,-38.215,5.640)
OP2: (1.648,-36.740,5.190)
C3': (-3.089,-38.177,6.541)
C1': (-2.199,-38.710,8.617)
C5': (-1.178,-39.304,5.261)
O4': (-1.487,-39.453,7.646)
C8: (-0.373,-36.959,8.332)
O2': (-4.483,-39.362,8.167)
C6: (-0.588,-34.879,11.152)
C5: (-0.622,-35.794,10.081)
C4: (-1.583,-36.788,10.149)
P: (1.159,-38.135,5.121)
C4': (-2.189,-39.390,6.382)
C2': (-3.532,-38.331,7.987)
C2: (-2.358,-36.053,12.083)
N1: (-1.482,-35.041,12.153)
N3: (-2.487,-36.976,11.128)
N6: (0.288,-33.873,11.219)
N7: (0.139,-35.909,8.929)
N9: (-1.415,-37.541,9.011)
O5': (-0.414,-38.117,5.388)
O3': (-4.174,-38.215,5.640)
Image (generated by PyMOL):