Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.536 89.781 114.706 1.00 73.75 O
ATOM 2 P A A 575 -13.263 90.313 113.215 1.00 74.60 P
ATOM 3 OP1 A A 575 -12.657 91.668 113.317 1.00 74.47 O
ATOM 4 OP2 A A 575 -14.511 90.127 112.429 1.00 74.55 O
ATOM 5 O5' A A 575 -12.185 89.299 112.628 1.00 71.92 O
ATOM 6 C5' A A 575 -12.018 89.176 111.213 1.00 72.41 C
ATOM 7 C4' A A 575 -10.567 88.947 110.860 1.00 72.35 C
ATOM 8 O4' A A 575 -9.762 90.074 111.310 1.00 72.34 O
ATOM 9 C3' A A 575 -9.910 87.701 111.436 1.00 71.86 C
ATOM 10 O3' A A 575 -9.045 87.179 110.445 1.00 72.96 O
ATOM 11 C2' A A 575 -9.122 88.249 112.624 1.00 70.89 C
ATOM 12 O2' A A 575 -7.987 87.482 112.960 1.00 70.39 O
ATOM 13 C1' A A 575 -8.682 89.602 112.088 1.00 70.78 C
ATOM 14 N9 A A 575 -8.372 90.592 113.119 1.00 70.63 N
ATOM 15 C8 A A 575 -9.231 91.407 113.818 1.00 70.74 C
ATOM 16 N7 A A 575 -8.626 92.224 114.648 1.00 70.45 N
ATOM 17 C5 A A 575 -7.278 91.921 114.493 1.00 70.06 C
ATOM 18 C6 A A 575 -6.113 92.443 115.087 1.00 68.86 C
ATOM 19 N6 A A 575 -6.115 93.429 115.988 1.00 68.35 N
ATOM 20 N1 A A 575 -4.928 91.911 114.715 1.00 68.33 N
ATOM 21 C2 A A 575 -4.921 90.929 113.807 1.00 68.34 C
ATOM 22 N3 A A 575 -5.943 90.359 113.174 1.00 69.55 N
ATOM 23 C4 A A 575 -7.109 90.907 113.565 1.00 70.54 C
ATOM 24 P G A 576 -9.400 85.779 109.748 1.00 76.11 P
ATOM 25 OP1 G A 576 -10.876 85.634 109.782 1.00 78.01 O
ATOM 26 OP2 G A 576 -8.544 84.734 110.367 1.00 74.93 O
ATOM 27 O5' G A 576 -8.984 85.980 108.221 1.00 75.88 O
TER
ATOM 1 O3' A B 557 -2.330 95.601 117.380 1.00 64.42 O
ATOM 2 P C B 558 -3.216 95.274 118.678 1.00 65.95 P
ATOM 3 OP1 C B 558 -2.286 94.876 119.766 1.00 66.27 O
ATOM 4 OP2 C B 558 -4.306 94.349 118.271 1.00 65.51 O
ATOM 5 O5' C B 558 -3.828 96.691 119.066 1.00 66.02 O
ATOM 6 C5' C B 558 -2.959 97.796 119.347 1.00 68.80 C
ATOM 7 C4' C B 558 -3.760 99.053 119.552 1.00 72.62 C
ATOM 8 O4' C B 558 -4.526 99.330 118.351 1.00 73.12 O
ATOM 9 C3' C B 558 -4.812 98.992 120.644 1.00 74.69 C
ATOM 10 O3' C B 558 -4.254 99.195 121.935 1.00 78.29 O
ATOM 11 C2' C B 558 -5.759 100.102 120.220 1.00 74.14 C
ATOM 12 O2' C B 558 -5.243 101.387 120.503 1.00 74.04 O
ATOM 13 C1' C B 558 -5.777 99.897 118.705 1.00 73.34 C
ATOM 14 N1 C B 558 -6.838 98.972 118.272 1.00 74.09 N
ATOM 15 C2 C B 558 -8.137 99.469 118.085 1.00 75.38 C
ATOM 16 O2 C B 558 -8.358 100.680 118.294 1.00 76.82 O
ATOM 17 N3 C B 558 -9.117 98.621 117.685 1.00 74.52 N
ATOM 18 C4 C B 558 -8.840 97.332 117.477 1.00 73.69 C
ATOM 19 N4 C B 558 -9.835 96.533 117.088 1.00 73.28 N
ATOM 20 C5 C B 558 -7.531 96.802 117.661 1.00 73.78 C
ATOM 21 C6 C B 558 -6.571 97.647 118.055 1.00 73.61 C
ATOM 22 P C B 559 -4.679 98.221 123.141 1.00 81.23 P
ATOM 23 OP1 C B 559 -3.991 98.689 124.375 1.00 80.49 O
ATOM 24 OP2 C B 559 -4.504 96.811 122.691 1.00 79.07 O
ATOM 25 O5' C B 559 -6.236 98.500 123.313 1.00 81.60 O
TER
ATOM 2 P A A 575 -13.263 90.313 113.215 1.00 74.60 P
ATOM 3 OP1 A A 575 -12.657 91.668 113.317 1.00 74.47 O
ATOM 4 OP2 A A 575 -14.511 90.127 112.429 1.00 74.55 O
ATOM 5 O5' A A 575 -12.185 89.299 112.628 1.00 71.92 O
ATOM 6 C5' A A 575 -12.018 89.176 111.213 1.00 72.41 C
ATOM 7 C4' A A 575 -10.567 88.947 110.860 1.00 72.35 C
ATOM 8 O4' A A 575 -9.762 90.074 111.310 1.00 72.34 O
ATOM 9 C3' A A 575 -9.910 87.701 111.436 1.00 71.86 C
ATOM 10 O3' A A 575 -9.045 87.179 110.445 1.00 72.96 O
ATOM 11 C2' A A 575 -9.122 88.249 112.624 1.00 70.89 C
ATOM 12 O2' A A 575 -7.987 87.482 112.960 1.00 70.39 O
ATOM 13 C1' A A 575 -8.682 89.602 112.088 1.00 70.78 C
ATOM 14 N9 A A 575 -8.372 90.592 113.119 1.00 70.63 N
ATOM 15 C8 A A 575 -9.231 91.407 113.818 1.00 70.74 C
ATOM 16 N7 A A 575 -8.626 92.224 114.648 1.00 70.45 N
ATOM 17 C5 A A 575 -7.278 91.921 114.493 1.00 70.06 C
ATOM 18 C6 A A 575 -6.113 92.443 115.087 1.00 68.86 C
ATOM 19 N6 A A 575 -6.115 93.429 115.988 1.00 68.35 N
ATOM 20 N1 A A 575 -4.928 91.911 114.715 1.00 68.33 N
ATOM 21 C2 A A 575 -4.921 90.929 113.807 1.00 68.34 C
ATOM 22 N3 A A 575 -5.943 90.359 113.174 1.00 69.55 N
ATOM 23 C4 A A 575 -7.109 90.907 113.565 1.00 70.54 C
ATOM 24 P G A 576 -9.400 85.779 109.748 1.00 76.11 P
ATOM 25 OP1 G A 576 -10.876 85.634 109.782 1.00 78.01 O
ATOM 26 OP2 G A 576 -8.544 84.734 110.367 1.00 74.93 O
ATOM 27 O5' G A 576 -8.984 85.980 108.221 1.00 75.88 O
TER
ATOM 1 O3' A B 557 -2.330 95.601 117.380 1.00 64.42 O
ATOM 2 P C B 558 -3.216 95.274 118.678 1.00 65.95 P
ATOM 3 OP1 C B 558 -2.286 94.876 119.766 1.00 66.27 O
ATOM 4 OP2 C B 558 -4.306 94.349 118.271 1.00 65.51 O
ATOM 5 O5' C B 558 -3.828 96.691 119.066 1.00 66.02 O
ATOM 6 C5' C B 558 -2.959 97.796 119.347 1.00 68.80 C
ATOM 7 C4' C B 558 -3.760 99.053 119.552 1.00 72.62 C
ATOM 8 O4' C B 558 -4.526 99.330 118.351 1.00 73.12 O
ATOM 9 C3' C B 558 -4.812 98.992 120.644 1.00 74.69 C
ATOM 10 O3' C B 558 -4.254 99.195 121.935 1.00 78.29 O
ATOM 11 C2' C B 558 -5.759 100.102 120.220 1.00 74.14 C
ATOM 12 O2' C B 558 -5.243 101.387 120.503 1.00 74.04 O
ATOM 13 C1' C B 558 -5.777 99.897 118.705 1.00 73.34 C
ATOM 14 N1 C B 558 -6.838 98.972 118.272 1.00 74.09 N
ATOM 15 C2 C B 558 -8.137 99.469 118.085 1.00 75.38 C
ATOM 16 O2 C B 558 -8.358 100.680 118.294 1.00 76.82 O
ATOM 17 N3 C B 558 -9.117 98.621 117.685 1.00 74.52 N
ATOM 18 C4 C B 558 -8.840 97.332 117.477 1.00 73.69 C
ATOM 19 N4 C B 558 -9.835 96.533 117.088 1.00 73.28 N
ATOM 20 C5 C B 558 -7.531 96.802 117.661 1.00 73.78 C
ATOM 21 C6 C B 558 -6.571 97.647 118.055 1.00 73.61 C
ATOM 22 P C B 559 -4.679 98.221 123.141 1.00 81.23 P
ATOM 23 OP1 C B 559 -3.991 98.689 124.375 1.00 80.49 O
ATOM 24 OP2 C B 559 -4.504 96.811 122.691 1.00 79.07 O
ATOM 25 O5' C B 559 -6.236 98.500 123.313 1.00 81.60 O
TER
Atoms:
OP1: (-12.657,91.668,113.317)
OP2: (-14.511,90.127,112.429)
C3': (-9.910,87.701,111.436)
C1': (-8.682,89.602,112.088)
C5': (-12.018,89.176,111.213)
O4': (-9.762,90.074,111.310)
C8: (-9.231,91.407,113.818)
O2': (-7.987,87.482,112.960)
C6: (-6.113,92.443,115.087)
C5: (-7.278,91.921,114.493)
C4: (-7.109,90.907,113.565)
P: (-13.263,90.313,113.215)
C4': (-10.567,88.947,110.860)
C2': (-9.122,88.249,112.624)
C2: (-4.921,90.929,113.807)
N1: (-4.928,91.911,114.715)
N3: (-5.943,90.359,113.174)
N6: (-6.115,93.429,115.988)
N7: (-8.626,92.224,114.648)
N9: (-8.372,90.592,113.119)
O5': (-12.185,89.299,112.628)
O3': (-9.045,87.179,110.445)
OP2: (-14.511,90.127,112.429)
C3': (-9.910,87.701,111.436)
C1': (-8.682,89.602,112.088)
C5': (-12.018,89.176,111.213)
O4': (-9.762,90.074,111.310)
C8: (-9.231,91.407,113.818)
O2': (-7.987,87.482,112.960)
C6: (-6.113,92.443,115.087)
C5: (-7.278,91.921,114.493)
C4: (-7.109,90.907,113.565)
P: (-13.263,90.313,113.215)
C4': (-10.567,88.947,110.860)
C2': (-9.122,88.249,112.624)
C2: (-4.921,90.929,113.807)
N1: (-4.928,91.911,114.715)
N3: (-5.943,90.359,113.174)
N6: (-6.115,93.429,115.988)
N7: (-8.626,92.224,114.648)
N9: (-8.372,90.592,113.119)
O5': (-12.185,89.299,112.628)
O3': (-9.045,87.179,110.445)
C2: (-8.137,99.469,118.085)
OP1: (-2.286,94.876,119.766)
OP2: (-4.306,94.349,118.271)
C4: (-8.840,97.332,117.477)
O5': (-3.828,96.691,119.066)
C3': (-4.812,98.992,120.644)
C1': (-5.777,99.897,118.705)
O4': (-4.526,99.330,118.351)
C5': (-2.959,97.796,119.347)
P: (-3.216,95.274,118.678)
O2: (-8.358,100.680,118.294)
C4': (-3.760,99.053,119.552)
C2': (-5.759,100.102,120.220)
O2': (-5.243,101.387,120.503)
N1: (-6.838,98.972,118.272)
N3: (-9.117,98.621,117.685)
N4: (-9.835,96.533,117.088)
C6: (-6.571,97.647,118.055)
C5: (-7.531,96.802,117.661)
O3': (-4.254,99.195,121.935)
OP1: (-2.286,94.876,119.766)
OP2: (-4.306,94.349,118.271)
C4: (-8.840,97.332,117.477)
O5': (-3.828,96.691,119.066)
C3': (-4.812,98.992,120.644)
C1': (-5.777,99.897,118.705)
O4': (-4.526,99.330,118.351)
C5': (-2.959,97.796,119.347)
P: (-3.216,95.274,118.678)
O2: (-8.358,100.680,118.294)
C4': (-3.760,99.053,119.552)
C2': (-5.759,100.102,120.220)
O2': (-5.243,101.387,120.503)
N1: (-6.838,98.972,118.272)
N3: (-9.117,98.621,117.685)
N4: (-9.835,96.533,117.088)
C6: (-6.571,97.647,118.055)
C5: (-7.531,96.802,117.661)
O3': (-4.254,99.195,121.935)
Image (generated by PyMOL):