Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B7:B8
Extra
PDB:
ATOM 1 O3' G A 6 -18.459 -45.488 20.159 1.00 58.76 O
ATOM 2 P G A 7 -17.868 -45.226 21.622 1.00 58.30 P
ATOM 3 OP1 G A 7 -16.993 -46.371 21.972 1.00 58.01 O
ATOM 4 OP2 G A 7 -18.993 -44.862 22.511 1.00 58.50 O
ATOM 5 O5' G A 7 -16.979 -43.918 21.412 1.00 58.11 O
ATOM 6 C5' G A 7 -15.687 -44.024 20.832 1.00 57.87 C
ATOM 7 C4' G A 7 -15.100 -42.648 20.602 1.00 58.09 C
ATOM 8 O4' G A 7 -16.037 -41.821 19.861 1.00 58.73 O
ATOM 9 C3' G A 7 -14.815 -41.849 21.864 1.00 57.83 C
ATOM 10 O3' G A 7 -13.590 -42.258 22.447 1.00 57.78 O
ATOM 11 C2' G A 7 -14.761 -40.434 21.299 1.00 57.92 C
ATOM 12 O2' G A 7 -13.523 -40.122 20.696 1.00 58.28 O
ATOM 13 C1' G A 7 -15.876 -40.469 20.253 1.00 58.26 C
ATOM 14 N9 G A 7 -17.121 -39.971 20.826 1.00 58.40 N
ATOM 15 C8 G A 7 -18.154 -40.712 21.344 1.00 58.59 C
ATOM 16 N7 G A 7 -19.129 -39.984 21.808 1.00 59.33 N
ATOM 17 C5 G A 7 -18.711 -38.680 21.592 1.00 59.22 C
ATOM 18 C6 G A 7 -19.353 -37.457 21.891 1.00 60.14 C
ATOM 19 O6 G A 7 -20.459 -37.294 22.423 1.00 62.00 O
ATOM 20 N1 G A 7 -18.593 -36.352 21.506 1.00 59.77 N
ATOM 21 C2 G A 7 -17.356 -36.429 20.910 1.00 59.27 C
ATOM 22 N2 G A 7 -16.757 -35.268 20.605 1.00 59.43 N
ATOM 23 N3 G A 7 -16.746 -37.573 20.629 1.00 58.86 N
ATOM 24 C4 G A 7 -17.477 -38.654 20.993 1.00 58.67 C
ATOM 25 P A A 8 -13.579 -42.888 23.921 1.00 58.20 P
ATOM 26 OP1 A A 8 -14.200 -44.226 23.838 1.00 58.16 O
ATOM 27 OP2 A A 8 -14.108 -41.871 24.860 1.00 58.83 O
ATOM 28 O5' A A 8 -12.029 -43.057 24.275 1.00 57.87 O
TER
ATOM 1 O3' G B 7 -13.590 -42.258 22.447 1.00 57.78 O
ATOM 2 P A B 8 -13.579 -42.888 23.921 1.00 58.20 P
ATOM 3 OP1 A B 8 -14.200 -44.226 23.838 1.00 58.16 O
ATOM 4 OP2 A B 8 -14.108 -41.871 24.860 1.00 58.83 O
ATOM 5 O5' A B 8 -12.029 -43.057 24.275 1.00 57.87 O
ATOM 6 C5' A B 8 -11.126 -43.664 23.355 1.00 58.42 C
ATOM 7 C4' A B 8 -9.863 -42.841 23.163 1.00 58.15 C
ATOM 8 O4' A B 8 -10.200 -41.586 22.527 1.00 58.23 O
ATOM 9 C3' A B 8 -9.141 -42.449 24.444 1.00 58.48 C
ATOM 10 O3' A B 8 -8.220 -43.454 24.825 1.00 58.88 O
ATOM 11 C2' A B 8 -8.423 -41.166 24.055 1.00 58.42 C
ATOM 12 O2' A B 8 -7.170 -41.413 23.450 1.00 58.38 O
ATOM 13 C1' A B 8 -9.390 -40.548 23.051 1.00 58.71 C
ATOM 14 N9 A B 8 -10.250 -39.515 23.630 1.00 59.14 N
ATOM 15 C8 A B 8 -11.574 -39.635 23.952 1.00 59.85 C
ATOM 16 N7 A B 8 -12.104 -38.545 24.455 1.00 60.28 N
ATOM 17 C5 A B 8 -11.052 -37.644 24.464 1.00 59.80 C
ATOM 18 C6 A B 8 -10.957 -36.298 24.877 1.00 59.60 C
ATOM 19 N6 A B 8 -11.985 -35.613 25.382 1.00 59.56 N
ATOM 20 N1 A B 8 -9.761 -35.685 24.752 1.00 59.36 N
ATOM 21 C2 A B 8 -8.729 -36.370 24.240 1.00 59.17 C
ATOM 22 N3 A B 8 -8.699 -37.635 23.819 1.00 59.04 N
ATOM 23 C4 A B 8 -9.900 -38.225 23.959 1.00 59.19 C
ATOM 24 P G B 9 -7.919 -43.711 26.374 1.00 59.87 P
ATOM 25 OP1 G B 9 -7.265 -45.035 26.496 1.00 59.93 O
ATOM 26 OP2 G B 9 -9.135 -43.414 27.173 1.00 59.87 O
ATOM 27 O5' G B 9 -6.860 -42.567 26.701 1.00 60.21 O
TER
ATOM 2 P G A 7 -17.868 -45.226 21.622 1.00 58.30 P
ATOM 3 OP1 G A 7 -16.993 -46.371 21.972 1.00 58.01 O
ATOM 4 OP2 G A 7 -18.993 -44.862 22.511 1.00 58.50 O
ATOM 5 O5' G A 7 -16.979 -43.918 21.412 1.00 58.11 O
ATOM 6 C5' G A 7 -15.687 -44.024 20.832 1.00 57.87 C
ATOM 7 C4' G A 7 -15.100 -42.648 20.602 1.00 58.09 C
ATOM 8 O4' G A 7 -16.037 -41.821 19.861 1.00 58.73 O
ATOM 9 C3' G A 7 -14.815 -41.849 21.864 1.00 57.83 C
ATOM 10 O3' G A 7 -13.590 -42.258 22.447 1.00 57.78 O
ATOM 11 C2' G A 7 -14.761 -40.434 21.299 1.00 57.92 C
ATOM 12 O2' G A 7 -13.523 -40.122 20.696 1.00 58.28 O
ATOM 13 C1' G A 7 -15.876 -40.469 20.253 1.00 58.26 C
ATOM 14 N9 G A 7 -17.121 -39.971 20.826 1.00 58.40 N
ATOM 15 C8 G A 7 -18.154 -40.712 21.344 1.00 58.59 C
ATOM 16 N7 G A 7 -19.129 -39.984 21.808 1.00 59.33 N
ATOM 17 C5 G A 7 -18.711 -38.680 21.592 1.00 59.22 C
ATOM 18 C6 G A 7 -19.353 -37.457 21.891 1.00 60.14 C
ATOM 19 O6 G A 7 -20.459 -37.294 22.423 1.00 62.00 O
ATOM 20 N1 G A 7 -18.593 -36.352 21.506 1.00 59.77 N
ATOM 21 C2 G A 7 -17.356 -36.429 20.910 1.00 59.27 C
ATOM 22 N2 G A 7 -16.757 -35.268 20.605 1.00 59.43 N
ATOM 23 N3 G A 7 -16.746 -37.573 20.629 1.00 58.86 N
ATOM 24 C4 G A 7 -17.477 -38.654 20.993 1.00 58.67 C
ATOM 25 P A A 8 -13.579 -42.888 23.921 1.00 58.20 P
ATOM 26 OP1 A A 8 -14.200 -44.226 23.838 1.00 58.16 O
ATOM 27 OP2 A A 8 -14.108 -41.871 24.860 1.00 58.83 O
ATOM 28 O5' A A 8 -12.029 -43.057 24.275 1.00 57.87 O
TER
ATOM 1 O3' G B 7 -13.590 -42.258 22.447 1.00 57.78 O
ATOM 2 P A B 8 -13.579 -42.888 23.921 1.00 58.20 P
ATOM 3 OP1 A B 8 -14.200 -44.226 23.838 1.00 58.16 O
ATOM 4 OP2 A B 8 -14.108 -41.871 24.860 1.00 58.83 O
ATOM 5 O5' A B 8 -12.029 -43.057 24.275 1.00 57.87 O
ATOM 6 C5' A B 8 -11.126 -43.664 23.355 1.00 58.42 C
ATOM 7 C4' A B 8 -9.863 -42.841 23.163 1.00 58.15 C
ATOM 8 O4' A B 8 -10.200 -41.586 22.527 1.00 58.23 O
ATOM 9 C3' A B 8 -9.141 -42.449 24.444 1.00 58.48 C
ATOM 10 O3' A B 8 -8.220 -43.454 24.825 1.00 58.88 O
ATOM 11 C2' A B 8 -8.423 -41.166 24.055 1.00 58.42 C
ATOM 12 O2' A B 8 -7.170 -41.413 23.450 1.00 58.38 O
ATOM 13 C1' A B 8 -9.390 -40.548 23.051 1.00 58.71 C
ATOM 14 N9 A B 8 -10.250 -39.515 23.630 1.00 59.14 N
ATOM 15 C8 A B 8 -11.574 -39.635 23.952 1.00 59.85 C
ATOM 16 N7 A B 8 -12.104 -38.545 24.455 1.00 60.28 N
ATOM 17 C5 A B 8 -11.052 -37.644 24.464 1.00 59.80 C
ATOM 18 C6 A B 8 -10.957 -36.298 24.877 1.00 59.60 C
ATOM 19 N6 A B 8 -11.985 -35.613 25.382 1.00 59.56 N
ATOM 20 N1 A B 8 -9.761 -35.685 24.752 1.00 59.36 N
ATOM 21 C2 A B 8 -8.729 -36.370 24.240 1.00 59.17 C
ATOM 22 N3 A B 8 -8.699 -37.635 23.819 1.00 59.04 N
ATOM 23 C4 A B 8 -9.900 -38.225 23.959 1.00 59.19 C
ATOM 24 P G B 9 -7.919 -43.711 26.374 1.00 59.87 P
ATOM 25 OP1 G B 9 -7.265 -45.035 26.496 1.00 59.93 O
ATOM 26 OP2 G B 9 -9.135 -43.414 27.173 1.00 59.87 O
ATOM 27 O5' G B 9 -6.860 -42.567 26.701 1.00 60.21 O
TER
Atoms:
OP1: (-16.993,-46.371,21.972)
OP2: (-18.993,-44.862,22.511)
C3': (-14.815,-41.849,21.864)
C1': (-15.876,-40.469,20.253)
C5': (-15.687,-44.024,20.832)
O6: (-20.459,-37.294,22.423)
O4': (-16.037,-41.821,19.861)
C8: (-18.154,-40.712,21.344)
C2: (-17.356,-36.429,20.910)
C6: (-19.353,-37.457,21.891)
C5: (-18.711,-38.680,21.592)
C4: (-17.477,-38.654,20.993)
P: (-17.868,-45.226,21.622)
C4': (-15.100,-42.648,20.602)
C2': (-14.761,-40.434,21.299)
O2': (-13.523,-40.122,20.696)
N1: (-18.593,-36.352,21.506)
N2: (-16.757,-35.268,20.605)
N3: (-16.746,-37.573,20.629)
N7: (-19.129,-39.984,21.808)
N9: (-17.121,-39.971,20.826)
O5': (-16.979,-43.918,21.412)
O3': (-13.590,-42.258,22.447)
OP2: (-18.993,-44.862,22.511)
C3': (-14.815,-41.849,21.864)
C1': (-15.876,-40.469,20.253)
C5': (-15.687,-44.024,20.832)
O6: (-20.459,-37.294,22.423)
O4': (-16.037,-41.821,19.861)
C8: (-18.154,-40.712,21.344)
C2: (-17.356,-36.429,20.910)
C6: (-19.353,-37.457,21.891)
C5: (-18.711,-38.680,21.592)
C4: (-17.477,-38.654,20.993)
P: (-17.868,-45.226,21.622)
C4': (-15.100,-42.648,20.602)
C2': (-14.761,-40.434,21.299)
O2': (-13.523,-40.122,20.696)
N1: (-18.593,-36.352,21.506)
N2: (-16.757,-35.268,20.605)
N3: (-16.746,-37.573,20.629)
N7: (-19.129,-39.984,21.808)
N9: (-17.121,-39.971,20.826)
O5': (-16.979,-43.918,21.412)
O3': (-13.590,-42.258,22.447)
OP1: (-14.200,-44.226,23.838)
OP2: (-14.108,-41.871,24.860)
C3': (-9.141,-42.449,24.444)
C1': (-9.390,-40.548,23.051)
C5': (-11.126,-43.664,23.355)
O4': (-10.200,-41.586,22.527)
C8: (-11.574,-39.635,23.952)
O2': (-7.170,-41.413,23.450)
C6: (-10.957,-36.298,24.877)
C5: (-11.052,-37.644,24.464)
C4: (-9.900,-38.225,23.959)
P: (-13.579,-42.888,23.921)
C4': (-9.863,-42.841,23.163)
C2': (-8.423,-41.166,24.055)
C2: (-8.729,-36.370,24.240)
N1: (-9.761,-35.685,24.752)
N3: (-8.699,-37.635,23.819)
N6: (-11.985,-35.613,25.382)
N7: (-12.104,-38.545,24.455)
N9: (-10.250,-39.515,23.630)
O5': (-12.029,-43.057,24.275)
O3': (-8.220,-43.454,24.825)
OP2: (-14.108,-41.871,24.860)
C3': (-9.141,-42.449,24.444)
C1': (-9.390,-40.548,23.051)
C5': (-11.126,-43.664,23.355)
O4': (-10.200,-41.586,22.527)
C8: (-11.574,-39.635,23.952)
O2': (-7.170,-41.413,23.450)
C6: (-10.957,-36.298,24.877)
C5: (-11.052,-37.644,24.464)
C4: (-9.900,-38.225,23.959)
P: (-13.579,-42.888,23.921)
C4': (-9.863,-42.841,23.163)
C2': (-8.423,-41.166,24.055)
C2: (-8.729,-36.370,24.240)
N1: (-9.761,-35.685,24.752)
N3: (-8.699,-37.635,23.819)
N6: (-11.985,-35.613,25.382)
N7: (-12.104,-38.545,24.455)
N9: (-10.250,-39.515,23.630)
O5': (-12.029,-43.057,24.275)
O3': (-8.220,-43.454,24.825)
Image (generated by PyMOL):