Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:B79:B80
Extra
PDB:
ATOM 1 O3' G A 78 -18.866 -30.076 26.443 1.00 55.78 O
ATOM 2 P G A 79 -19.228 -30.294 24.898 1.00 55.81 P
ATOM 3 OP1 G A 79 -19.298 -28.951 24.274 1.00 56.54 O
ATOM 4 OP2 G A 79 -20.375 -31.224 24.793 1.00 55.56 O
ATOM 5 O5' G A 79 -17.946 -31.064 24.334 1.00 55.16 O
ATOM 6 C5' G A 79 -16.671 -30.430 24.324 1.00 54.03 C
ATOM 7 C4' G A 79 -15.572 -31.434 24.047 1.00 52.76 C
ATOM 8 O4' G A 79 -15.544 -32.448 25.078 1.00 51.99 O
ATOM 9 C3' G A 79 -15.743 -32.231 22.768 1.00 52.82 C
ATOM 10 O3' G A 79 -15.322 -31.457 21.656 1.00 53.77 O
ATOM 11 C2' G A 79 -14.821 -33.409 23.057 1.00 51.94 C
ATOM 12 O2' G A 79 -13.449 -33.080 22.941 1.00 52.06 O
ATOM 13 C1' G A 79 -15.171 -33.692 24.512 1.00 51.53 C
ATOM 14 N9 G A 79 -16.268 -34.651 24.658 1.00 51.38 N
ATOM 15 C8 G A 79 -17.610 -34.365 24.756 1.00 51.79 C
ATOM 16 N7 G A 79 -18.366 -35.418 24.875 1.00 51.64 N
ATOM 17 C5 G A 79 -17.470 -36.474 24.853 1.00 51.05 C
ATOM 18 C6 G A 79 -17.714 -37.861 24.946 1.00 51.18 C
ATOM 19 O6 G A 79 -18.808 -38.424 25.069 1.00 52.50 O
ATOM 20 N1 G A 79 -16.543 -38.612 24.887 1.00 50.29 N
ATOM 21 C2 G A 79 -15.286 -38.073 24.755 1.00 50.14 C
ATOM 22 N2 G A 79 -14.269 -38.947 24.715 1.00 50.09 N
ATOM 23 N3 G A 79 -15.040 -36.767 24.667 1.00 50.18 N
ATOM 24 C4 G A 79 -16.176 -36.025 24.721 1.00 50.75 C
ATOM 25 P A A 80 -16.377 -30.978 20.552 1.00 54.14 P
ATOM 26 OP1 A A 80 -16.993 -29.706 21.004 1.00 54.34 O
ATOM 27 OP2 A A 80 -17.226 -32.138 20.188 1.00 53.63 O
ATOM 28 O5' A A 80 -15.403 -30.663 19.325 1.00 54.35 O
TER
ATOM 1 O3' G B 79 -15.322 -31.457 21.656 1.00 53.77 O
ATOM 2 P A B 80 -16.377 -30.978 20.552 1.00 54.14 P
ATOM 3 OP1 A B 80 -16.993 -29.706 21.004 1.00 54.34 O
ATOM 4 OP2 A B 80 -17.226 -32.138 20.188 1.00 53.63 O
ATOM 5 O5' A B 80 -15.403 -30.663 19.325 1.00 54.35 O
ATOM 6 C5' A B 80 -14.618 -29.472 19.324 1.00 54.95 C
ATOM 7 C4' A B 80 -13.196 -29.753 18.886 1.00 54.92 C
ATOM 8 O4' A B 80 -12.633 -30.784 19.735 1.00 54.64 O
ATOM 9 C3' A B 80 -13.039 -30.311 17.481 1.00 55.30 C
ATOM 10 O3' A B 80 -13.065 -29.271 16.506 1.00 56.52 O
ATOM 11 C2' A B 80 -11.675 -30.982 17.601 1.00 54.61 C
ATOM 12 O2' A B 80 -10.601 -30.065 17.612 1.00 54.88 O
ATOM 13 C1' A B 80 -11.794 -31.634 18.974 1.00 54.38 C
ATOM 14 N9 A B 80 -12.363 -32.984 18.933 1.00 54.48 N
ATOM 15 C8 A B 80 -13.631 -33.356 19.291 1.00 54.56 C
ATOM 16 N7 A B 80 -13.873 -34.637 19.147 1.00 54.27 N
ATOM 17 C5 A B 80 -12.685 -35.148 18.658 1.00 53.95 C
ATOM 18 C6 A B 80 -12.291 -36.455 18.295 1.00 53.61 C
ATOM 19 N6 A B 80 -13.093 -37.519 18.381 1.00 53.53 N
ATOM 20 N1 A B 80 -11.029 -36.631 17.848 1.00 53.43 N
ATOM 21 C2 A B 80 -10.222 -35.562 17.766 1.00 53.62 C
ATOM 22 N3 A B 80 -10.479 -34.288 18.076 1.00 53.74 N
ATOM 23 C4 A B 80 -11.741 -34.144 18.521 1.00 54.00 C
ATOM 24 P C B 81 -14.255 -29.146 15.429 1.00 57.87 P
ATOM 25 OP1 C B 81 -13.877 -28.069 14.481 1.00 58.16 O
ATOM 26 OP2 C B 81 -15.554 -29.065 16.137 1.00 57.51 O
ATOM 27 O5' C B 81 -14.218 -30.553 14.666 1.00 57.32 O
TER
ATOM 2 P G A 79 -19.228 -30.294 24.898 1.00 55.81 P
ATOM 3 OP1 G A 79 -19.298 -28.951 24.274 1.00 56.54 O
ATOM 4 OP2 G A 79 -20.375 -31.224 24.793 1.00 55.56 O
ATOM 5 O5' G A 79 -17.946 -31.064 24.334 1.00 55.16 O
ATOM 6 C5' G A 79 -16.671 -30.430 24.324 1.00 54.03 C
ATOM 7 C4' G A 79 -15.572 -31.434 24.047 1.00 52.76 C
ATOM 8 O4' G A 79 -15.544 -32.448 25.078 1.00 51.99 O
ATOM 9 C3' G A 79 -15.743 -32.231 22.768 1.00 52.82 C
ATOM 10 O3' G A 79 -15.322 -31.457 21.656 1.00 53.77 O
ATOM 11 C2' G A 79 -14.821 -33.409 23.057 1.00 51.94 C
ATOM 12 O2' G A 79 -13.449 -33.080 22.941 1.00 52.06 O
ATOM 13 C1' G A 79 -15.171 -33.692 24.512 1.00 51.53 C
ATOM 14 N9 G A 79 -16.268 -34.651 24.658 1.00 51.38 N
ATOM 15 C8 G A 79 -17.610 -34.365 24.756 1.00 51.79 C
ATOM 16 N7 G A 79 -18.366 -35.418 24.875 1.00 51.64 N
ATOM 17 C5 G A 79 -17.470 -36.474 24.853 1.00 51.05 C
ATOM 18 C6 G A 79 -17.714 -37.861 24.946 1.00 51.18 C
ATOM 19 O6 G A 79 -18.808 -38.424 25.069 1.00 52.50 O
ATOM 20 N1 G A 79 -16.543 -38.612 24.887 1.00 50.29 N
ATOM 21 C2 G A 79 -15.286 -38.073 24.755 1.00 50.14 C
ATOM 22 N2 G A 79 -14.269 -38.947 24.715 1.00 50.09 N
ATOM 23 N3 G A 79 -15.040 -36.767 24.667 1.00 50.18 N
ATOM 24 C4 G A 79 -16.176 -36.025 24.721 1.00 50.75 C
ATOM 25 P A A 80 -16.377 -30.978 20.552 1.00 54.14 P
ATOM 26 OP1 A A 80 -16.993 -29.706 21.004 1.00 54.34 O
ATOM 27 OP2 A A 80 -17.226 -32.138 20.188 1.00 53.63 O
ATOM 28 O5' A A 80 -15.403 -30.663 19.325 1.00 54.35 O
TER
ATOM 1 O3' G B 79 -15.322 -31.457 21.656 1.00 53.77 O
ATOM 2 P A B 80 -16.377 -30.978 20.552 1.00 54.14 P
ATOM 3 OP1 A B 80 -16.993 -29.706 21.004 1.00 54.34 O
ATOM 4 OP2 A B 80 -17.226 -32.138 20.188 1.00 53.63 O
ATOM 5 O5' A B 80 -15.403 -30.663 19.325 1.00 54.35 O
ATOM 6 C5' A B 80 -14.618 -29.472 19.324 1.00 54.95 C
ATOM 7 C4' A B 80 -13.196 -29.753 18.886 1.00 54.92 C
ATOM 8 O4' A B 80 -12.633 -30.784 19.735 1.00 54.64 O
ATOM 9 C3' A B 80 -13.039 -30.311 17.481 1.00 55.30 C
ATOM 10 O3' A B 80 -13.065 -29.271 16.506 1.00 56.52 O
ATOM 11 C2' A B 80 -11.675 -30.982 17.601 1.00 54.61 C
ATOM 12 O2' A B 80 -10.601 -30.065 17.612 1.00 54.88 O
ATOM 13 C1' A B 80 -11.794 -31.634 18.974 1.00 54.38 C
ATOM 14 N9 A B 80 -12.363 -32.984 18.933 1.00 54.48 N
ATOM 15 C8 A B 80 -13.631 -33.356 19.291 1.00 54.56 C
ATOM 16 N7 A B 80 -13.873 -34.637 19.147 1.00 54.27 N
ATOM 17 C5 A B 80 -12.685 -35.148 18.658 1.00 53.95 C
ATOM 18 C6 A B 80 -12.291 -36.455 18.295 1.00 53.61 C
ATOM 19 N6 A B 80 -13.093 -37.519 18.381 1.00 53.53 N
ATOM 20 N1 A B 80 -11.029 -36.631 17.848 1.00 53.43 N
ATOM 21 C2 A B 80 -10.222 -35.562 17.766 1.00 53.62 C
ATOM 22 N3 A B 80 -10.479 -34.288 18.076 1.00 53.74 N
ATOM 23 C4 A B 80 -11.741 -34.144 18.521 1.00 54.00 C
ATOM 24 P C B 81 -14.255 -29.146 15.429 1.00 57.87 P
ATOM 25 OP1 C B 81 -13.877 -28.069 14.481 1.00 58.16 O
ATOM 26 OP2 C B 81 -15.554 -29.065 16.137 1.00 57.51 O
ATOM 27 O5' C B 81 -14.218 -30.553 14.666 1.00 57.32 O
TER
Atoms:
OP1: (-19.298,-28.951,24.274)
OP2: (-20.375,-31.224,24.793)
C3': (-15.743,-32.231,22.768)
C1': (-15.171,-33.692,24.512)
C5': (-16.671,-30.430,24.324)
O6: (-18.808,-38.424,25.069)
O4': (-15.544,-32.448,25.078)
C8: (-17.610,-34.365,24.756)
C2: (-15.286,-38.073,24.755)
C6: (-17.714,-37.861,24.946)
C5: (-17.470,-36.474,24.853)
C4: (-16.176,-36.025,24.721)
P: (-19.228,-30.294,24.898)
C4': (-15.572,-31.434,24.047)
C2': (-14.821,-33.409,23.057)
O2': (-13.449,-33.080,22.941)
N1: (-16.543,-38.612,24.887)
N2: (-14.269,-38.947,24.715)
N3: (-15.040,-36.767,24.667)
N7: (-18.366,-35.418,24.875)
N9: (-16.268,-34.651,24.658)
O5': (-17.946,-31.064,24.334)
O3': (-15.322,-31.457,21.656)
OP2: (-20.375,-31.224,24.793)
C3': (-15.743,-32.231,22.768)
C1': (-15.171,-33.692,24.512)
C5': (-16.671,-30.430,24.324)
O6: (-18.808,-38.424,25.069)
O4': (-15.544,-32.448,25.078)
C8: (-17.610,-34.365,24.756)
C2: (-15.286,-38.073,24.755)
C6: (-17.714,-37.861,24.946)
C5: (-17.470,-36.474,24.853)
C4: (-16.176,-36.025,24.721)
P: (-19.228,-30.294,24.898)
C4': (-15.572,-31.434,24.047)
C2': (-14.821,-33.409,23.057)
O2': (-13.449,-33.080,22.941)
N1: (-16.543,-38.612,24.887)
N2: (-14.269,-38.947,24.715)
N3: (-15.040,-36.767,24.667)
N7: (-18.366,-35.418,24.875)
N9: (-16.268,-34.651,24.658)
O5': (-17.946,-31.064,24.334)
O3': (-15.322,-31.457,21.656)
OP1: (-16.993,-29.706,21.004)
OP2: (-17.226,-32.138,20.188)
C3': (-13.039,-30.311,17.481)
C1': (-11.794,-31.634,18.974)
C5': (-14.618,-29.472,19.324)
O4': (-12.633,-30.784,19.735)
C8: (-13.631,-33.356,19.291)
O2': (-10.601,-30.065,17.612)
C6: (-12.291,-36.455,18.295)
C5: (-12.685,-35.148,18.658)
C4: (-11.741,-34.144,18.521)
P: (-16.377,-30.978,20.552)
C4': (-13.196,-29.753,18.886)
C2': (-11.675,-30.982,17.601)
C2: (-10.222,-35.562,17.766)
N1: (-11.029,-36.631,17.848)
N3: (-10.479,-34.288,18.076)
N6: (-13.093,-37.519,18.381)
N7: (-13.873,-34.637,19.147)
N9: (-12.363,-32.984,18.933)
O5': (-15.403,-30.663,19.325)
O3': (-13.065,-29.271,16.506)
OP2: (-17.226,-32.138,20.188)
C3': (-13.039,-30.311,17.481)
C1': (-11.794,-31.634,18.974)
C5': (-14.618,-29.472,19.324)
O4': (-12.633,-30.784,19.735)
C8: (-13.631,-33.356,19.291)
O2': (-10.601,-30.065,17.612)
C6: (-12.291,-36.455,18.295)
C5: (-12.685,-35.148,18.658)
C4: (-11.741,-34.144,18.521)
P: (-16.377,-30.978,20.552)
C4': (-13.196,-29.753,18.886)
C2': (-11.675,-30.982,17.601)
C2: (-10.222,-35.562,17.766)
N1: (-11.029,-36.631,17.848)
N3: (-10.479,-34.288,18.076)
N6: (-13.093,-37.519,18.381)
N7: (-13.873,-34.637,19.147)
N9: (-12.363,-32.984,18.933)
O5': (-15.403,-30.663,19.325)
O3': (-13.065,-29.271,16.506)
Image (generated by PyMOL):