Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A408:A409
Extra
PDB:
ATOM 1 O3' U A 407 -113.007 40.407 -85.527 1.00 62.09 O
ATOM 2 P G A 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 3 OP1 G A 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 4 OP2 G A 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 5 O5' G A 408 -114.904 39.405 -84.286 1.00 37.29 O
ATOM 6 C5' G A 408 -116.237 39.526 -83.886 1.00 37.29 C
ATOM 7 C4' G A 408 -116.892 38.190 -83.823 1.00 37.29 C
ATOM 8 O4' G A 408 -116.012 37.194 -84.416 1.00 37.29 O
ATOM 9 C3' G A 408 -117.139 37.658 -82.429 1.00 37.29 C
ATOM 10 O3' G A 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 11 C2' G A 408 -117.211 36.162 -82.672 1.00 37.29 C
ATOM 12 O2' G A 408 -118.418 35.806 -83.343 1.00 37.29 O
ATOM 13 C1' G A 408 -116.045 36.012 -83.636 1.00 37.29 C
ATOM 14 N9 G A 408 -114.759 35.919 -82.909 1.00 38.55 N
ATOM 15 C8 G A 408 -113.894 36.970 -82.624 1.00 38.55 C
ATOM 16 N7 G A 408 -112.814 36.622 -81.958 1.00 38.55 N
ATOM 17 C5 G A 408 -112.977 35.246 -81.780 1.00 38.55 C
ATOM 18 C6 G A 408 -112.146 34.293 -81.132 1.00 38.55 C
ATOM 19 O6 G A 408 -111.060 34.468 -80.574 1.00 38.55 O
ATOM 20 N1 G A 408 -112.685 33.018 -81.179 1.00 38.55 N
ATOM 21 C2 G A 408 -113.871 32.675 -81.770 1.00 38.55 C
ATOM 22 N2 G A 408 -114.212 31.375 -81.707 1.00 38.55 N
ATOM 23 N3 G A 408 -114.663 33.547 -82.374 1.00 38.55 N
ATOM 24 C4 G A 408 -114.167 34.804 -82.349 1.00 38.55 C
ATOM 25 P A A 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 26 OP1 A A 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 27 OP2 A A 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 28 O5' A A 409 -120.108 39.818 -81.569 1.00 62.47 O
TER
ATOM 1 O3' G B 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 2 P A B 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 3 OP1 A B 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 4 OP2 A B 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 5 O5' A B 409 -120.108 39.818 -81.569 1.00 62.47 O
ATOM 6 C5' A B 409 -120.942 38.747 -81.998 1.00 62.47 C
ATOM 7 C4' A B 409 -121.786 38.238 -80.875 1.00 62.47 C
ATOM 8 O4' A B 409 -120.971 37.390 -80.015 1.00 62.47 O
ATOM 9 C3' A B 409 -122.347 39.331 -79.970 1.00 62.47 C
ATOM 10 O3' A B 409 -123.602 38.895 -79.431 1.00 62.47 O
ATOM 11 C2' A B 409 -121.293 39.388 -78.870 1.00 62.47 C
ATOM 12 O2' A B 409 -121.706 39.999 -77.669 1.00 62.47 O
ATOM 13 C1' A B 409 -121.016 37.903 -78.696 1.00 62.47 C
ATOM 14 N9 A B 409 -119.761 37.582 -78.005 1.00 63.36 N
ATOM 15 C8 A B 409 -118.655 38.375 -77.804 1.00 63.36 C
ATOM 16 N7 A B 409 -117.692 37.792 -77.119 1.00 63.36 N
ATOM 17 C5 A B 409 -118.208 36.539 -76.835 1.00 63.36 C
ATOM 18 C6 A B 409 -117.672 35.454 -76.135 1.00 63.36 C
ATOM 19 N6 A B 409 -116.455 35.504 -75.595 1.00 63.36 N
ATOM 20 N1 A B 409 -118.420 34.330 -76.018 1.00 63.36 N
ATOM 21 C2 A B 409 -119.637 34.325 -76.580 1.00 63.36 C
ATOM 22 N3 A B 409 -120.258 35.292 -77.258 1.00 63.36 N
ATOM 23 C4 A B 409 -119.480 36.391 -77.358 1.00 63.36 C
ATOM 24 P A B 410 -124.952 39.008 -80.308 1.00115.25 P
ATOM 25 OP1 A B 410 -125.780 37.809 -80.012 1.00115.25 O
ATOM 26 OP2 A B 410 -124.541 39.251 -81.710 1.00115.25 O
ATOM 27 O5' A B 410 -125.645 40.317 -79.710 1.00115.25 O
TER
ATOM 2 P G A 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 3 OP1 G A 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 4 OP2 G A 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 5 O5' G A 408 -114.904 39.405 -84.286 1.00 37.29 O
ATOM 6 C5' G A 408 -116.237 39.526 -83.886 1.00 37.29 C
ATOM 7 C4' G A 408 -116.892 38.190 -83.823 1.00 37.29 C
ATOM 8 O4' G A 408 -116.012 37.194 -84.416 1.00 37.29 O
ATOM 9 C3' G A 408 -117.139 37.658 -82.429 1.00 37.29 C
ATOM 10 O3' G A 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 11 C2' G A 408 -117.211 36.162 -82.672 1.00 37.29 C
ATOM 12 O2' G A 408 -118.418 35.806 -83.343 1.00 37.29 O
ATOM 13 C1' G A 408 -116.045 36.012 -83.636 1.00 37.29 C
ATOM 14 N9 G A 408 -114.759 35.919 -82.909 1.00 38.55 N
ATOM 15 C8 G A 408 -113.894 36.970 -82.624 1.00 38.55 C
ATOM 16 N7 G A 408 -112.814 36.622 -81.958 1.00 38.55 N
ATOM 17 C5 G A 408 -112.977 35.246 -81.780 1.00 38.55 C
ATOM 18 C6 G A 408 -112.146 34.293 -81.132 1.00 38.55 C
ATOM 19 O6 G A 408 -111.060 34.468 -80.574 1.00 38.55 O
ATOM 20 N1 G A 408 -112.685 33.018 -81.179 1.00 38.55 N
ATOM 21 C2 G A 408 -113.871 32.675 -81.770 1.00 38.55 C
ATOM 22 N2 G A 408 -114.212 31.375 -81.707 1.00 38.55 N
ATOM 23 N3 G A 408 -114.663 33.547 -82.374 1.00 38.55 N
ATOM 24 C4 G A 408 -114.167 34.804 -82.349 1.00 38.55 C
ATOM 25 P A A 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 26 OP1 A A 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 27 OP2 A A 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 28 O5' A A 409 -120.108 39.818 -81.569 1.00 62.47 O
TER
ATOM 1 O3' G B 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 2 P A B 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 3 OP1 A B 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 4 OP2 A B 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 5 O5' A B 409 -120.108 39.818 -81.569 1.00 62.47 O
ATOM 6 C5' A B 409 -120.942 38.747 -81.998 1.00 62.47 C
ATOM 7 C4' A B 409 -121.786 38.238 -80.875 1.00 62.47 C
ATOM 8 O4' A B 409 -120.971 37.390 -80.015 1.00 62.47 O
ATOM 9 C3' A B 409 -122.347 39.331 -79.970 1.00 62.47 C
ATOM 10 O3' A B 409 -123.602 38.895 -79.431 1.00 62.47 O
ATOM 11 C2' A B 409 -121.293 39.388 -78.870 1.00 62.47 C
ATOM 12 O2' A B 409 -121.706 39.999 -77.669 1.00 62.47 O
ATOM 13 C1' A B 409 -121.016 37.903 -78.696 1.00 62.47 C
ATOM 14 N9 A B 409 -119.761 37.582 -78.005 1.00 63.36 N
ATOM 15 C8 A B 409 -118.655 38.375 -77.804 1.00 63.36 C
ATOM 16 N7 A B 409 -117.692 37.792 -77.119 1.00 63.36 N
ATOM 17 C5 A B 409 -118.208 36.539 -76.835 1.00 63.36 C
ATOM 18 C6 A B 409 -117.672 35.454 -76.135 1.00 63.36 C
ATOM 19 N6 A B 409 -116.455 35.504 -75.595 1.00 63.36 N
ATOM 20 N1 A B 409 -118.420 34.330 -76.018 1.00 63.36 N
ATOM 21 C2 A B 409 -119.637 34.325 -76.580 1.00 63.36 C
ATOM 22 N3 A B 409 -120.258 35.292 -77.258 1.00 63.36 N
ATOM 23 C4 A B 409 -119.480 36.391 -77.358 1.00 63.36 C
ATOM 24 P A B 410 -124.952 39.008 -80.308 1.00115.25 P
ATOM 25 OP1 A B 410 -125.780 37.809 -80.012 1.00115.25 O
ATOM 26 OP2 A B 410 -124.541 39.251 -81.710 1.00115.25 O
ATOM 27 O5' A B 410 -125.645 40.317 -79.710 1.00115.25 O
TER
Atoms:
OP1: (-114.718,41.882,-84.516)
OP2: (-113.093,40.608,-83.062)
C3': (-117.139,37.658,-82.429)
C1': (-116.045,36.012,-83.636)
C5': (-116.237,39.526,-83.886)
O6: (-111.060,34.468,-80.574)
O4': (-116.012,37.194,-84.416)
C8: (-113.894,36.970,-82.624)
C2: (-113.871,32.675,-81.770)
C6: (-112.146,34.293,-81.132)
C5: (-112.977,35.246,-81.780)
C4: (-114.167,34.804,-82.349)
P: (-113.949,40.660,-84.257)
C4': (-116.892,38.190,-83.823)
C2': (-117.211,36.162,-82.672)
O2': (-118.418,35.806,-83.343)
N1: (-112.685,33.018,-81.179)
N2: (-114.212,31.375,-81.707)
N3: (-114.663,33.547,-82.374)
N7: (-112.814,36.622,-81.958)
N9: (-114.759,35.919,-82.909)
O5': (-114.904,39.405,-84.286)
O3': (-118.278,38.203,-81.810)
OP2: (-113.093,40.608,-83.062)
C3': (-117.139,37.658,-82.429)
C1': (-116.045,36.012,-83.636)
C5': (-116.237,39.526,-83.886)
O6: (-111.060,34.468,-80.574)
O4': (-116.012,37.194,-84.416)
C8: (-113.894,36.970,-82.624)
C2: (-113.871,32.675,-81.770)
C6: (-112.146,34.293,-81.132)
C5: (-112.977,35.246,-81.780)
C4: (-114.167,34.804,-82.349)
P: (-113.949,40.660,-84.257)
C4': (-116.892,38.190,-83.823)
C2': (-117.211,36.162,-82.672)
O2': (-118.418,35.806,-83.343)
N1: (-112.685,33.018,-81.179)
N2: (-114.212,31.375,-81.707)
N3: (-114.663,33.547,-82.374)
N7: (-112.814,36.622,-81.958)
N9: (-114.759,35.919,-82.909)
O5': (-114.904,39.405,-84.286)
O3': (-118.278,38.203,-81.810)
OP1: (-118.316,40.207,-83.259)
OP2: (-117.810,40.422,-80.780)
C3': (-122.347,39.331,-79.970)
C1': (-121.016,37.903,-78.696)
C5': (-120.942,38.747,-81.998)
O4': (-120.971,37.390,-80.015)
C8: (-118.655,38.375,-77.804)
O2': (-121.706,39.999,-77.669)
C6: (-117.672,35.454,-76.135)
C5: (-118.208,36.539,-76.835)
C4: (-119.480,36.391,-77.358)
P: (-118.563,39.775,-81.875)
C4': (-121.786,38.238,-80.875)
C2': (-121.293,39.388,-78.870)
C2: (-119.637,34.325,-76.580)
N1: (-118.420,34.330,-76.018)
N3: (-120.258,35.292,-77.258)
N6: (-116.455,35.504,-75.595)
N7: (-117.692,37.792,-77.119)
N9: (-119.761,37.582,-78.005)
O5': (-120.108,39.818,-81.569)
O3': (-123.602,38.895,-79.431)
OP2: (-117.810,40.422,-80.780)
C3': (-122.347,39.331,-79.970)
C1': (-121.016,37.903,-78.696)
C5': (-120.942,38.747,-81.998)
O4': (-120.971,37.390,-80.015)
C8: (-118.655,38.375,-77.804)
O2': (-121.706,39.999,-77.669)
C6: (-117.672,35.454,-76.135)
C5: (-118.208,36.539,-76.835)
C4: (-119.480,36.391,-77.358)
P: (-118.563,39.775,-81.875)
C4': (-121.786,38.238,-80.875)
C2': (-121.293,39.388,-78.870)
C2: (-119.637,34.325,-76.580)
N1: (-118.420,34.330,-76.018)
N3: (-120.258,35.292,-77.258)
N6: (-116.455,35.504,-75.595)
N7: (-117.692,37.792,-77.119)
N9: (-119.761,37.582,-78.005)
O5': (-120.108,39.818,-81.569)
O3': (-123.602,38.895,-79.431)
Image (generated by PyMOL):