Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1881:A1882
Extra
PDB:
ATOM 1 O3' C A1880 -89.614 -8.153 58.875 1.00 21.79 O
ATOM 2 P G A1881 -89.848 -7.737 57.353 1.00 21.41 P
ATOM 3 OP1 G A1881 -89.377 -6.343 57.201 1.00 21.41 O
ATOM 4 OP2 G A1881 -91.262 -8.059 57.030 1.00 21.41 O
ATOM 5 O5' G A1881 -88.873 -8.718 56.566 1.00 21.41 O
ATOM 6 C5' G A1881 -87.521 -8.857 56.960 1.00 21.41 C
ATOM 7 C4' G A1881 -86.997 -10.233 56.655 1.00 21.41 C
ATOM 8 O4' G A1881 -87.713 -11.222 57.438 1.00 21.41 O
ATOM 9 C3' G A1881 -87.168 -10.722 55.232 1.00 21.41 C
ATOM 10 O3' G A1881 -86.227 -10.178 54.330 1.00 21.41 O
ATOM 11 C2' G A1881 -87.022 -12.218 55.415 1.00 21.41 C
ATOM 12 O2' G A1881 -85.666 -12.571 55.622 1.00 21.41 O
ATOM 13 C1' G A1881 -87.792 -12.426 56.715 1.00 21.41 C
ATOM 14 N9 G A1881 -89.209 -12.733 56.433 1.00 22.04 N
ATOM 15 C8 G A1881 -90.234 -11.874 56.069 1.00 22.04 C
ATOM 16 N7 G A1881 -91.369 -12.475 55.791 1.00 22.04 N
ATOM 17 C5 G A1881 -91.054 -13.821 55.950 1.00 22.04 C
ATOM 18 C6 G A1881 -91.867 -14.970 55.785 1.00 22.04 C
ATOM 19 O6 G A1881 -93.070 -15.026 55.469 1.00 22.04 O
ATOM 20 N1 G A1881 -91.136 -16.136 56.034 1.00 22.04 N
ATOM 21 C2 G A1881 -89.803 -16.194 56.389 1.00 22.04 C
ATOM 22 N2 G A1881 -89.276 -17.418 56.578 1.00 22.04 N
ATOM 23 N3 G A1881 -89.045 -15.127 56.550 1.00 22.04 N
ATOM 24 C4 G A1881 -89.732 -13.993 56.321 1.00 22.04 C
ATOM 25 P A A1882 -86.583 -8.871 53.462 1.00 7.62 P
ATOM 26 OP1 A A1882 -86.714 -7.737 54.418 1.00 7.62 O
ATOM 27 OP2 A A1882 -87.738 -9.208 52.589 1.00 7.62 O
ATOM 28 O5' A A1882 -85.281 -8.686 52.574 1.00 7.62 O
TER
ATOM 1 O3' G B1881 -86.227 -10.178 54.330 1.00 21.41 O
ATOM 2 P A B1882 -86.583 -8.871 53.462 1.00 7.62 P
ATOM 3 OP1 A B1882 -86.714 -7.737 54.418 1.00 7.62 O
ATOM 4 OP2 A B1882 -87.738 -9.208 52.589 1.00 7.62 O
ATOM 5 O5' A B1882 -85.281 -8.686 52.574 1.00 7.62 O
ATOM 6 C5' A B1882 -83.999 -8.805 53.153 1.00 7.62 C
ATOM 7 C4' A B1882 -83.021 -9.418 52.192 1.00 7.62 C
ATOM 8 O4' A B1882 -82.810 -10.803 52.529 1.00 7.62 O
ATOM 9 C3' A B1882 -83.442 -9.457 50.731 1.00 7.62 C
ATOM 10 O3' A B1882 -83.213 -8.226 50.072 1.00 7.62 O
ATOM 11 C2' A B1882 -82.601 -10.597 50.207 1.00 7.62 C
ATOM 12 O2' A B1882 -81.239 -10.208 50.120 1.00 7.62 O
ATOM 13 C1' A B1882 -82.734 -11.568 51.357 1.00 7.62 C
ATOM 14 N9 A B1882 -83.962 -12.379 51.266 1.00 7.74 N
ATOM 15 C8 A B1882 -85.249 -12.100 51.632 1.00 7.74 C
ATOM 16 N7 A B1882 -86.071 -13.103 51.455 1.00 7.74 N
ATOM 17 C5 A B1882 -85.271 -14.113 50.942 1.00 7.74 C
ATOM 18 C6 A B1882 -85.488 -15.448 50.520 1.00 7.74 C
ATOM 19 N6 A B1882 -86.643 -16.121 50.504 1.00 7.74 N
ATOM 20 N1 A B1882 -84.432 -16.143 50.093 1.00 7.74 N
ATOM 21 C2 A B1882 -83.236 -15.573 50.065 1.00 7.74 C
ATOM 22 N3 A B1882 -82.895 -14.351 50.407 1.00 7.74 N
ATOM 23 C4 A B1882 -83.972 -13.673 50.842 1.00 7.74 C
ATOM 24 P A B1883 -83.403 -8.073 48.495 1.00 19.10 P
ATOM 25 OP1 A B1883 -82.730 -6.818 48.123 1.00 19.10 O
ATOM 26 OP2 A B1883 -84.846 -8.235 48.192 1.00 19.10 O
ATOM 27 O5' A B1883 -82.594 -9.284 47.924 1.00 19.10 O
TER
ATOM 2 P G A1881 -89.848 -7.737 57.353 1.00 21.41 P
ATOM 3 OP1 G A1881 -89.377 -6.343 57.201 1.00 21.41 O
ATOM 4 OP2 G A1881 -91.262 -8.059 57.030 1.00 21.41 O
ATOM 5 O5' G A1881 -88.873 -8.718 56.566 1.00 21.41 O
ATOM 6 C5' G A1881 -87.521 -8.857 56.960 1.00 21.41 C
ATOM 7 C4' G A1881 -86.997 -10.233 56.655 1.00 21.41 C
ATOM 8 O4' G A1881 -87.713 -11.222 57.438 1.00 21.41 O
ATOM 9 C3' G A1881 -87.168 -10.722 55.232 1.00 21.41 C
ATOM 10 O3' G A1881 -86.227 -10.178 54.330 1.00 21.41 O
ATOM 11 C2' G A1881 -87.022 -12.218 55.415 1.00 21.41 C
ATOM 12 O2' G A1881 -85.666 -12.571 55.622 1.00 21.41 O
ATOM 13 C1' G A1881 -87.792 -12.426 56.715 1.00 21.41 C
ATOM 14 N9 G A1881 -89.209 -12.733 56.433 1.00 22.04 N
ATOM 15 C8 G A1881 -90.234 -11.874 56.069 1.00 22.04 C
ATOM 16 N7 G A1881 -91.369 -12.475 55.791 1.00 22.04 N
ATOM 17 C5 G A1881 -91.054 -13.821 55.950 1.00 22.04 C
ATOM 18 C6 G A1881 -91.867 -14.970 55.785 1.00 22.04 C
ATOM 19 O6 G A1881 -93.070 -15.026 55.469 1.00 22.04 O
ATOM 20 N1 G A1881 -91.136 -16.136 56.034 1.00 22.04 N
ATOM 21 C2 G A1881 -89.803 -16.194 56.389 1.00 22.04 C
ATOM 22 N2 G A1881 -89.276 -17.418 56.578 1.00 22.04 N
ATOM 23 N3 G A1881 -89.045 -15.127 56.550 1.00 22.04 N
ATOM 24 C4 G A1881 -89.732 -13.993 56.321 1.00 22.04 C
ATOM 25 P A A1882 -86.583 -8.871 53.462 1.00 7.62 P
ATOM 26 OP1 A A1882 -86.714 -7.737 54.418 1.00 7.62 O
ATOM 27 OP2 A A1882 -87.738 -9.208 52.589 1.00 7.62 O
ATOM 28 O5' A A1882 -85.281 -8.686 52.574 1.00 7.62 O
TER
ATOM 1 O3' G B1881 -86.227 -10.178 54.330 1.00 21.41 O
ATOM 2 P A B1882 -86.583 -8.871 53.462 1.00 7.62 P
ATOM 3 OP1 A B1882 -86.714 -7.737 54.418 1.00 7.62 O
ATOM 4 OP2 A B1882 -87.738 -9.208 52.589 1.00 7.62 O
ATOM 5 O5' A B1882 -85.281 -8.686 52.574 1.00 7.62 O
ATOM 6 C5' A B1882 -83.999 -8.805 53.153 1.00 7.62 C
ATOM 7 C4' A B1882 -83.021 -9.418 52.192 1.00 7.62 C
ATOM 8 O4' A B1882 -82.810 -10.803 52.529 1.00 7.62 O
ATOM 9 C3' A B1882 -83.442 -9.457 50.731 1.00 7.62 C
ATOM 10 O3' A B1882 -83.213 -8.226 50.072 1.00 7.62 O
ATOM 11 C2' A B1882 -82.601 -10.597 50.207 1.00 7.62 C
ATOM 12 O2' A B1882 -81.239 -10.208 50.120 1.00 7.62 O
ATOM 13 C1' A B1882 -82.734 -11.568 51.357 1.00 7.62 C
ATOM 14 N9 A B1882 -83.962 -12.379 51.266 1.00 7.74 N
ATOM 15 C8 A B1882 -85.249 -12.100 51.632 1.00 7.74 C
ATOM 16 N7 A B1882 -86.071 -13.103 51.455 1.00 7.74 N
ATOM 17 C5 A B1882 -85.271 -14.113 50.942 1.00 7.74 C
ATOM 18 C6 A B1882 -85.488 -15.448 50.520 1.00 7.74 C
ATOM 19 N6 A B1882 -86.643 -16.121 50.504 1.00 7.74 N
ATOM 20 N1 A B1882 -84.432 -16.143 50.093 1.00 7.74 N
ATOM 21 C2 A B1882 -83.236 -15.573 50.065 1.00 7.74 C
ATOM 22 N3 A B1882 -82.895 -14.351 50.407 1.00 7.74 N
ATOM 23 C4 A B1882 -83.972 -13.673 50.842 1.00 7.74 C
ATOM 24 P A B1883 -83.403 -8.073 48.495 1.00 19.10 P
ATOM 25 OP1 A B1883 -82.730 -6.818 48.123 1.00 19.10 O
ATOM 26 OP2 A B1883 -84.846 -8.235 48.192 1.00 19.10 O
ATOM 27 O5' A B1883 -82.594 -9.284 47.924 1.00 19.10 O
TER
Atoms:
OP1: (-89.377,-6.343,57.201)
OP2: (-91.262,-8.059,57.030)
C3': (-87.168,-10.722,55.232)
C1': (-87.792,-12.426,56.715)
C5': (-87.521,-8.857,56.960)
O6: (-93.070,-15.026,55.469)
O4': (-87.713,-11.222,57.438)
C8: (-90.234,-11.874,56.069)
C2: (-89.803,-16.194,56.389)
C6: (-91.867,-14.970,55.785)
C5: (-91.054,-13.821,55.950)
C4: (-89.732,-13.993,56.321)
P: (-89.848,-7.737,57.353)
C4': (-86.997,-10.233,56.655)
C2': (-87.022,-12.218,55.415)
O2': (-85.666,-12.571,55.622)
N1: (-91.136,-16.136,56.034)
N2: (-89.276,-17.418,56.578)
N3: (-89.045,-15.127,56.550)
N7: (-91.369,-12.475,55.791)
N9: (-89.209,-12.733,56.433)
O5': (-88.873,-8.718,56.566)
O3': (-86.227,-10.178,54.330)
OP2: (-91.262,-8.059,57.030)
C3': (-87.168,-10.722,55.232)
C1': (-87.792,-12.426,56.715)
C5': (-87.521,-8.857,56.960)
O6: (-93.070,-15.026,55.469)
O4': (-87.713,-11.222,57.438)
C8: (-90.234,-11.874,56.069)
C2: (-89.803,-16.194,56.389)
C6: (-91.867,-14.970,55.785)
C5: (-91.054,-13.821,55.950)
C4: (-89.732,-13.993,56.321)
P: (-89.848,-7.737,57.353)
C4': (-86.997,-10.233,56.655)
C2': (-87.022,-12.218,55.415)
O2': (-85.666,-12.571,55.622)
N1: (-91.136,-16.136,56.034)
N2: (-89.276,-17.418,56.578)
N3: (-89.045,-15.127,56.550)
N7: (-91.369,-12.475,55.791)
N9: (-89.209,-12.733,56.433)
O5': (-88.873,-8.718,56.566)
O3': (-86.227,-10.178,54.330)
OP1: (-86.714,-7.737,54.418)
OP2: (-87.738,-9.208,52.589)
C3': (-83.442,-9.457,50.731)
C1': (-82.734,-11.568,51.357)
C5': (-83.999,-8.805,53.153)
O4': (-82.810,-10.803,52.529)
C8: (-85.249,-12.100,51.632)
O2': (-81.239,-10.208,50.120)
C6: (-85.488,-15.448,50.520)
C5: (-85.271,-14.113,50.942)
C4: (-83.972,-13.673,50.842)
P: (-86.583,-8.871,53.462)
C4': (-83.021,-9.418,52.192)
C2': (-82.601,-10.597,50.207)
C2: (-83.236,-15.573,50.065)
N1: (-84.432,-16.143,50.093)
N3: (-82.895,-14.351,50.407)
N6: (-86.643,-16.121,50.504)
N7: (-86.071,-13.103,51.455)
N9: (-83.962,-12.379,51.266)
O5': (-85.281,-8.686,52.574)
O3': (-83.213,-8.226,50.072)
OP2: (-87.738,-9.208,52.589)
C3': (-83.442,-9.457,50.731)
C1': (-82.734,-11.568,51.357)
C5': (-83.999,-8.805,53.153)
O4': (-82.810,-10.803,52.529)
C8: (-85.249,-12.100,51.632)
O2': (-81.239,-10.208,50.120)
C6: (-85.488,-15.448,50.520)
C5: (-85.271,-14.113,50.942)
C4: (-83.972,-13.673,50.842)
P: (-86.583,-8.871,53.462)
C4': (-83.021,-9.418,52.192)
C2': (-82.601,-10.597,50.207)
C2: (-83.236,-15.573,50.065)
N1: (-84.432,-16.143,50.093)
N3: (-82.895,-14.351,50.407)
N6: (-86.643,-16.121,50.504)
N7: (-86.071,-13.103,51.455)
N9: (-83.962,-12.379,51.266)
O5': (-85.281,-8.686,52.574)
O3': (-83.213,-8.226,50.072)
Image (generated by PyMOL):