Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1880:A1881
Extra
PDB:
ATOM 1 O3' C A1879 -35.430 176.705 107.630 1.00 24.82 O
ATOM 2 P G A1880 -35.861 175.175 107.403 1.00 26.61 P
ATOM 3 OP1 G A1880 -35.605 174.857 105.977 1.00 26.61 O
ATOM 4 OP2 G A1880 -37.256 175.026 107.940 1.00 26.61 O
ATOM 5 O5' G A1880 -34.829 174.383 108.327 1.00 26.61 O
ATOM 6 C5' G A1880 -33.803 175.072 109.031 1.00 26.61 C
ATOM 7 C4' G A1880 -33.631 174.544 110.437 1.00 26.61 C
ATOM 8 O4' G A1880 -34.283 175.424 111.395 1.00 26.61 O
ATOM 9 C3' G A1880 -34.252 173.202 110.738 1.00 26.61 C
ATOM 10 O3' G A1880 -33.517 172.115 110.208 1.00 26.61 O
ATOM 11 C2' G A1880 -34.294 173.238 112.255 1.00 26.61 C
ATOM 12 O2' G A1880 -32.987 173.104 112.793 1.00 26.61 O
ATOM 13 C1' G A1880 -34.752 174.669 112.488 1.00 26.61 C
ATOM 14 N9 G A1880 -36.210 174.764 112.520 1.00 26.58 N
ATOM 15 C8 G A1880 -36.994 174.589 111.424 1.00 26.58 C
ATOM 16 N7 G A1880 -38.266 174.701 111.684 1.00 26.58 N
ATOM 17 C5 G A1880 -38.330 174.949 113.046 1.00 26.58 C
ATOM 18 C6 G A1880 -39.471 175.142 113.885 1.00 26.58 C
ATOM 19 O6 G A1880 -40.670 175.138 113.560 1.00 26.58 O
ATOM 20 N1 G A1880 -39.107 175.354 115.220 1.00 26.58 N
ATOM 21 C2 G A1880 -37.803 175.377 115.668 1.00 26.58 C
ATOM 22 N2 G A1880 -37.667 175.612 116.979 1.00 26.58 N
ATOM 23 N3 G A1880 -36.723 175.193 114.892 1.00 26.58 N
ATOM 24 C4 G A1880 -37.055 174.987 113.589 1.00 26.58 C
ATOM 25 P A A1881 -34.275 170.748 109.816 1.00 23.27 P
ATOM 26 OP1 A A1881 -34.500 170.762 108.348 1.00 23.27 O
ATOM 27 OP2 A A1881 -35.460 170.636 110.719 1.00 23.27 O
ATOM 28 O5' A A1881 -33.206 169.632 110.178 1.00 23.27 O
TER
ATOM 1 O3' G B1880 -33.517 172.115 110.208 1.00 26.61 O
ATOM 2 P A B1881 -34.275 170.748 109.816 1.00 23.27 P
ATOM 3 OP1 A B1881 -34.500 170.762 108.348 1.00 23.27 O
ATOM 4 OP2 A B1881 -35.460 170.636 110.719 1.00 23.27 O
ATOM 5 O5' A B1881 -33.206 169.632 110.178 1.00 23.27 O
ATOM 6 C5' A B1881 -31.824 169.868 110.028 1.00 23.27 C
ATOM 7 C4' A B1881 -31.059 169.074 111.032 1.00 23.27 C
ATOM 8 O4' A B1881 -31.134 169.736 112.328 1.00 23.27 O
ATOM 9 C3' A B1881 -31.609 167.685 111.318 1.00 23.27 C
ATOM 10 O3' A B1881 -31.239 166.720 110.357 1.00 23.27 O
ATOM 11 C2' A B1881 -31.051 167.407 112.695 1.00 23.27 C
ATOM 12 O2' A B1881 -29.650 167.139 112.617 1.00 23.27 O
ATOM 13 C1' A B1881 -31.262 168.767 113.353 1.00 23.27 C
ATOM 14 N9 A B1881 -32.615 168.879 113.932 1.00 22.51 N
ATOM 15 C8 A B1881 -33.752 169.350 113.309 1.00 22.51 C
ATOM 16 N7 A B1881 -34.835 169.349 114.055 1.00 22.51 N
ATOM 17 C5 A B1881 -34.381 168.814 115.252 1.00 22.51 C
ATOM 18 C6 A B1881 -35.039 168.537 116.459 1.00 22.51 C
ATOM 19 N6 A B1881 -36.340 168.757 116.661 1.00 22.51 N
ATOM 20 N1 A B1881 -34.302 168.020 117.465 1.00 22.51 N
ATOM 21 C2 A B1881 -33.001 167.790 117.270 1.00 22.51 C
ATOM 22 N3 A B1881 -32.274 168.002 116.184 1.00 22.51 N
ATOM 23 C4 A B1881 -33.023 168.523 115.194 1.00 22.51 C
ATOM 24 P A B1882 -32.086 165.351 110.230 1.00 19.29 P
ATOM 25 OP1 A B1882 -31.445 164.540 109.142 1.00 19.29 O
ATOM 26 OP2 A B1882 -33.534 165.736 110.101 1.00 19.29 O
ATOM 27 O5' A B1882 -31.840 164.648 111.636 1.00 19.29 O
TER
ATOM 2 P G A1880 -35.861 175.175 107.403 1.00 26.61 P
ATOM 3 OP1 G A1880 -35.605 174.857 105.977 1.00 26.61 O
ATOM 4 OP2 G A1880 -37.256 175.026 107.940 1.00 26.61 O
ATOM 5 O5' G A1880 -34.829 174.383 108.327 1.00 26.61 O
ATOM 6 C5' G A1880 -33.803 175.072 109.031 1.00 26.61 C
ATOM 7 C4' G A1880 -33.631 174.544 110.437 1.00 26.61 C
ATOM 8 O4' G A1880 -34.283 175.424 111.395 1.00 26.61 O
ATOM 9 C3' G A1880 -34.252 173.202 110.738 1.00 26.61 C
ATOM 10 O3' G A1880 -33.517 172.115 110.208 1.00 26.61 O
ATOM 11 C2' G A1880 -34.294 173.238 112.255 1.00 26.61 C
ATOM 12 O2' G A1880 -32.987 173.104 112.793 1.00 26.61 O
ATOM 13 C1' G A1880 -34.752 174.669 112.488 1.00 26.61 C
ATOM 14 N9 G A1880 -36.210 174.764 112.520 1.00 26.58 N
ATOM 15 C8 G A1880 -36.994 174.589 111.424 1.00 26.58 C
ATOM 16 N7 G A1880 -38.266 174.701 111.684 1.00 26.58 N
ATOM 17 C5 G A1880 -38.330 174.949 113.046 1.00 26.58 C
ATOM 18 C6 G A1880 -39.471 175.142 113.885 1.00 26.58 C
ATOM 19 O6 G A1880 -40.670 175.138 113.560 1.00 26.58 O
ATOM 20 N1 G A1880 -39.107 175.354 115.220 1.00 26.58 N
ATOM 21 C2 G A1880 -37.803 175.377 115.668 1.00 26.58 C
ATOM 22 N2 G A1880 -37.667 175.612 116.979 1.00 26.58 N
ATOM 23 N3 G A1880 -36.723 175.193 114.892 1.00 26.58 N
ATOM 24 C4 G A1880 -37.055 174.987 113.589 1.00 26.58 C
ATOM 25 P A A1881 -34.275 170.748 109.816 1.00 23.27 P
ATOM 26 OP1 A A1881 -34.500 170.762 108.348 1.00 23.27 O
ATOM 27 OP2 A A1881 -35.460 170.636 110.719 1.00 23.27 O
ATOM 28 O5' A A1881 -33.206 169.632 110.178 1.00 23.27 O
TER
ATOM 1 O3' G B1880 -33.517 172.115 110.208 1.00 26.61 O
ATOM 2 P A B1881 -34.275 170.748 109.816 1.00 23.27 P
ATOM 3 OP1 A B1881 -34.500 170.762 108.348 1.00 23.27 O
ATOM 4 OP2 A B1881 -35.460 170.636 110.719 1.00 23.27 O
ATOM 5 O5' A B1881 -33.206 169.632 110.178 1.00 23.27 O
ATOM 6 C5' A B1881 -31.824 169.868 110.028 1.00 23.27 C
ATOM 7 C4' A B1881 -31.059 169.074 111.032 1.00 23.27 C
ATOM 8 O4' A B1881 -31.134 169.736 112.328 1.00 23.27 O
ATOM 9 C3' A B1881 -31.609 167.685 111.318 1.00 23.27 C
ATOM 10 O3' A B1881 -31.239 166.720 110.357 1.00 23.27 O
ATOM 11 C2' A B1881 -31.051 167.407 112.695 1.00 23.27 C
ATOM 12 O2' A B1881 -29.650 167.139 112.617 1.00 23.27 O
ATOM 13 C1' A B1881 -31.262 168.767 113.353 1.00 23.27 C
ATOM 14 N9 A B1881 -32.615 168.879 113.932 1.00 22.51 N
ATOM 15 C8 A B1881 -33.752 169.350 113.309 1.00 22.51 C
ATOM 16 N7 A B1881 -34.835 169.349 114.055 1.00 22.51 N
ATOM 17 C5 A B1881 -34.381 168.814 115.252 1.00 22.51 C
ATOM 18 C6 A B1881 -35.039 168.537 116.459 1.00 22.51 C
ATOM 19 N6 A B1881 -36.340 168.757 116.661 1.00 22.51 N
ATOM 20 N1 A B1881 -34.302 168.020 117.465 1.00 22.51 N
ATOM 21 C2 A B1881 -33.001 167.790 117.270 1.00 22.51 C
ATOM 22 N3 A B1881 -32.274 168.002 116.184 1.00 22.51 N
ATOM 23 C4 A B1881 -33.023 168.523 115.194 1.00 22.51 C
ATOM 24 P A B1882 -32.086 165.351 110.230 1.00 19.29 P
ATOM 25 OP1 A B1882 -31.445 164.540 109.142 1.00 19.29 O
ATOM 26 OP2 A B1882 -33.534 165.736 110.101 1.00 19.29 O
ATOM 27 O5' A B1882 -31.840 164.648 111.636 1.00 19.29 O
TER
Atoms:
OP1: (-35.605,174.857,105.977)
OP2: (-37.256,175.026,107.940)
C3': (-34.252,173.202,110.738)
C1': (-34.752,174.669,112.488)
C5': (-33.803,175.072,109.031)
O6: (-40.670,175.138,113.560)
O4': (-34.283,175.424,111.395)
C8: (-36.994,174.589,111.424)
C2: (-37.803,175.377,115.668)
C6: (-39.471,175.142,113.885)
C5: (-38.330,174.949,113.046)
C4: (-37.055,174.987,113.589)
P: (-35.861,175.175,107.403)
C4': (-33.631,174.544,110.437)
C2': (-34.294,173.238,112.255)
O2': (-32.987,173.104,112.793)
N1: (-39.107,175.354,115.220)
N2: (-37.667,175.612,116.979)
N3: (-36.723,175.193,114.892)
N7: (-38.266,174.701,111.684)
N9: (-36.210,174.764,112.520)
O5': (-34.829,174.383,108.327)
O3': (-33.517,172.115,110.208)
OP2: (-37.256,175.026,107.940)
C3': (-34.252,173.202,110.738)
C1': (-34.752,174.669,112.488)
C5': (-33.803,175.072,109.031)
O6: (-40.670,175.138,113.560)
O4': (-34.283,175.424,111.395)
C8: (-36.994,174.589,111.424)
C2: (-37.803,175.377,115.668)
C6: (-39.471,175.142,113.885)
C5: (-38.330,174.949,113.046)
C4: (-37.055,174.987,113.589)
P: (-35.861,175.175,107.403)
C4': (-33.631,174.544,110.437)
C2': (-34.294,173.238,112.255)
O2': (-32.987,173.104,112.793)
N1: (-39.107,175.354,115.220)
N2: (-37.667,175.612,116.979)
N3: (-36.723,175.193,114.892)
N7: (-38.266,174.701,111.684)
N9: (-36.210,174.764,112.520)
O5': (-34.829,174.383,108.327)
O3': (-33.517,172.115,110.208)
OP1: (-34.500,170.762,108.348)
OP2: (-35.460,170.636,110.719)
C3': (-31.609,167.685,111.318)
C1': (-31.262,168.767,113.353)
C5': (-31.824,169.868,110.028)
O4': (-31.134,169.736,112.328)
C8: (-33.752,169.350,113.309)
O2': (-29.650,167.139,112.617)
C6: (-35.039,168.537,116.459)
C5: (-34.381,168.814,115.252)
C4: (-33.023,168.523,115.194)
P: (-34.275,170.748,109.816)
C4': (-31.059,169.074,111.032)
C2': (-31.051,167.407,112.695)
C2: (-33.001,167.790,117.270)
N1: (-34.302,168.020,117.465)
N3: (-32.274,168.002,116.184)
N6: (-36.340,168.757,116.661)
N7: (-34.835,169.349,114.055)
N9: (-32.615,168.879,113.932)
O5': (-33.206,169.632,110.178)
O3': (-31.239,166.720,110.357)
OP2: (-35.460,170.636,110.719)
C3': (-31.609,167.685,111.318)
C1': (-31.262,168.767,113.353)
C5': (-31.824,169.868,110.028)
O4': (-31.134,169.736,112.328)
C8: (-33.752,169.350,113.309)
O2': (-29.650,167.139,112.617)
C6: (-35.039,168.537,116.459)
C5: (-34.381,168.814,115.252)
C4: (-33.023,168.523,115.194)
P: (-34.275,170.748,109.816)
C4': (-31.059,169.074,111.032)
C2': (-31.051,167.407,112.695)
C2: (-33.001,167.790,117.270)
N1: (-34.302,168.020,117.465)
N3: (-32.274,168.002,116.184)
N6: (-36.340,168.757,116.661)
N7: (-34.835,169.349,114.055)
N9: (-32.615,168.879,113.932)
O5': (-33.206,169.632,110.178)
O3': (-31.239,166.720,110.357)
Image (generated by PyMOL):