Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A234:A235
Extra
PDB:
ATOM 1 O3' C A 233 93.145 111.668 -8.968 1.00 69.47 O
ATOM 2 P G A 234 94.636 112.259 -8.987 1.00 71.55 P
ATOM 3 OP1 G A 234 95.009 112.560 -10.401 1.00 72.86 O
ATOM 4 OP2 G A 234 95.488 111.330 -8.183 1.00 71.05 O
ATOM 5 O5' G A 234 94.442 113.649 -8.235 1.00 70.70 O
ATOM 6 C5' G A 234 93.251 114.425 -8.475 1.00 69.67 C
ATOM 7 C4' G A 234 93.193 115.595 -7.533 1.00 69.31 C
ATOM 8 O4' G A 234 92.986 115.106 -6.173 1.00 68.94 O
ATOM 9 C3' G A 234 94.489 116.395 -7.509 1.00 68.46 C
ATOM 10 O3' G A 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 11 C2' G A 234 95.228 115.796 -6.321 1.00 68.43 C
ATOM 12 O2' G A 234 96.185 116.682 -5.779 1.00 68.43 O
ATOM 13 C1' G A 234 94.075 115.498 -5.360 1.00 69.05 C
ATOM 14 N9 G A 234 94.375 114.422 -4.415 1.00 69.01 N
ATOM 15 C8 G A 234 94.979 113.216 -4.691 1.00 69.43 C
ATOM 16 N7 G A 234 95.222 112.507 -3.622 1.00 69.78 N
ATOM 17 C5 G A 234 94.732 113.281 -2.578 1.00 69.67 C
ATOM 18 C6 G A 234 94.750 113.051 -1.178 1.00 69.43 C
ATOM 19 O6 G A 234 95.249 112.109 -0.556 1.00 69.49 O
ATOM 20 N1 G A 234 94.122 114.078 -0.486 1.00 69.93 N
ATOM 21 C2 G A 234 93.561 115.193 -1.058 1.00 70.35 C
ATOM 22 N2 G A 234 92.986 116.062 -0.212 1.00 71.66 N
ATOM 23 N3 G A 234 93.562 115.435 -2.357 1.00 70.00 N
ATOM 24 C4 G A 234 94.165 114.445 -3.054 1.00 69.50 C
ATOM 25 P A A 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 26 OP1 A A 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 27 OP2 A A 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 28 O5' A A 235 94.071 120.166 -8.232 1.00 68.36 O
TER
ATOM 1 O3' G B 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 2 P A B 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 3 OP1 A B 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 4 OP2 A B 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 5 O5' A B 235 94.071 120.166 -8.232 1.00 68.36 O
ATOM 6 C5' A B 235 92.672 120.293 -8.518 1.00 65.00 C
ATOM 7 C4' A B 235 92.113 121.447 -7.736 1.00 63.47 C
ATOM 8 O4' A B 235 92.096 121.104 -6.319 1.00 62.86 O
ATOM 9 C3' A B 235 92.960 122.706 -7.843 1.00 63.32 C
ATOM 10 O3' A B 235 92.104 123.826 -7.733 1.00 64.79 O
ATOM 11 C2' A B 235 93.845 122.606 -6.606 1.00 62.65 C
ATOM 12 O2' A B 235 94.386 123.832 -6.171 1.00 61.49 O
ATOM 13 C1' A B 235 92.853 122.050 -5.593 1.00 62.65 C
ATOM 14 N9 A B 235 93.442 121.401 -4.415 1.00 62.98 N
ATOM 15 C8 A B 235 94.179 120.233 -4.349 1.00 63.34 C
ATOM 16 N7 A B 235 94.555 119.912 -3.137 1.00 62.88 N
ATOM 17 C5 A B 235 94.038 120.931 -2.348 1.00 62.56 C
ATOM 18 C6 A B 235 94.093 121.173 -0.966 1.00 62.38 C
ATOM 19 N6 A B 235 94.717 120.375 -0.097 1.00 61.95 N
ATOM 20 N1 A B 235 93.478 122.284 -0.496 1.00 62.29 N
ATOM 21 C2 A B 235 92.854 123.087 -1.363 1.00 62.05 C
ATOM 22 N3 A B 235 92.731 122.968 -2.682 1.00 61.90 N
ATOM 23 C4 A B 235 93.353 121.857 -3.120 1.00 62.43 C
ATOM 24 P A B 236 91.541 124.519 -9.062 1.00 66.17 P
ATOM 25 OP1 A B 236 92.569 124.315 -10.132 1.00 66.21 O
ATOM 26 OP2 A B 236 91.120 125.888 -8.682 1.00 66.36 O
ATOM 27 O5' A B 236 90.250 123.670 -9.457 1.00 65.21 O
TER
ATOM 2 P G A 234 94.636 112.259 -8.987 1.00 71.55 P
ATOM 3 OP1 G A 234 95.009 112.560 -10.401 1.00 72.86 O
ATOM 4 OP2 G A 234 95.488 111.330 -8.183 1.00 71.05 O
ATOM 5 O5' G A 234 94.442 113.649 -8.235 1.00 70.70 O
ATOM 6 C5' G A 234 93.251 114.425 -8.475 1.00 69.67 C
ATOM 7 C4' G A 234 93.193 115.595 -7.533 1.00 69.31 C
ATOM 8 O4' G A 234 92.986 115.106 -6.173 1.00 68.94 O
ATOM 9 C3' G A 234 94.489 116.395 -7.509 1.00 68.46 C
ATOM 10 O3' G A 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 11 C2' G A 234 95.228 115.796 -6.321 1.00 68.43 C
ATOM 12 O2' G A 234 96.185 116.682 -5.779 1.00 68.43 O
ATOM 13 C1' G A 234 94.075 115.498 -5.360 1.00 69.05 C
ATOM 14 N9 G A 234 94.375 114.422 -4.415 1.00 69.01 N
ATOM 15 C8 G A 234 94.979 113.216 -4.691 1.00 69.43 C
ATOM 16 N7 G A 234 95.222 112.507 -3.622 1.00 69.78 N
ATOM 17 C5 G A 234 94.732 113.281 -2.578 1.00 69.67 C
ATOM 18 C6 G A 234 94.750 113.051 -1.178 1.00 69.43 C
ATOM 19 O6 G A 234 95.249 112.109 -0.556 1.00 69.49 O
ATOM 20 N1 G A 234 94.122 114.078 -0.486 1.00 69.93 N
ATOM 21 C2 G A 234 93.561 115.193 -1.058 1.00 70.35 C
ATOM 22 N2 G A 234 92.986 116.062 -0.212 1.00 71.66 N
ATOM 23 N3 G A 234 93.562 115.435 -2.357 1.00 70.00 N
ATOM 24 C4 G A 234 94.165 114.445 -3.054 1.00 69.50 C
ATOM 25 P A A 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 26 OP1 A A 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 27 OP2 A A 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 28 O5' A A 235 94.071 120.166 -8.232 1.00 68.36 O
TER
ATOM 1 O3' G B 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 2 P A B 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 3 OP1 A B 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 4 OP2 A B 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 5 O5' A B 235 94.071 120.166 -8.232 1.00 68.36 O
ATOM 6 C5' A B 235 92.672 120.293 -8.518 1.00 65.00 C
ATOM 7 C4' A B 235 92.113 121.447 -7.736 1.00 63.47 C
ATOM 8 O4' A B 235 92.096 121.104 -6.319 1.00 62.86 O
ATOM 9 C3' A B 235 92.960 122.706 -7.843 1.00 63.32 C
ATOM 10 O3' A B 235 92.104 123.826 -7.733 1.00 64.79 O
ATOM 11 C2' A B 235 93.845 122.606 -6.606 1.00 62.65 C
ATOM 12 O2' A B 235 94.386 123.832 -6.171 1.00 61.49 O
ATOM 13 C1' A B 235 92.853 122.050 -5.593 1.00 62.65 C
ATOM 14 N9 A B 235 93.442 121.401 -4.415 1.00 62.98 N
ATOM 15 C8 A B 235 94.179 120.233 -4.349 1.00 63.34 C
ATOM 16 N7 A B 235 94.555 119.912 -3.137 1.00 62.88 N
ATOM 17 C5 A B 235 94.038 120.931 -2.348 1.00 62.56 C
ATOM 18 C6 A B 235 94.093 121.173 -0.966 1.00 62.38 C
ATOM 19 N6 A B 235 94.717 120.375 -0.097 1.00 61.95 N
ATOM 20 N1 A B 235 93.478 122.284 -0.496 1.00 62.29 N
ATOM 21 C2 A B 235 92.854 123.087 -1.363 1.00 62.05 C
ATOM 22 N3 A B 235 92.731 122.968 -2.682 1.00 61.90 N
ATOM 23 C4 A B 235 93.353 121.857 -3.120 1.00 62.43 C
ATOM 24 P A B 236 91.541 124.519 -9.062 1.00 66.17 P
ATOM 25 OP1 A B 236 92.569 124.315 -10.132 1.00 66.21 O
ATOM 26 OP2 A B 236 91.120 125.888 -8.682 1.00 66.36 O
ATOM 27 O5' A B 236 90.250 123.670 -9.457 1.00 65.21 O
TER
Atoms:
OP1: (95.009,112.560,-10.401)
OP2: (95.488,111.330,-8.183)
C3': (94.489,116.395,-7.509)
C1': (94.075,115.498,-5.360)
C5': (93.251,114.425,-8.475)
O6: (95.249,112.109,-0.556)
O4': (92.986,115.106,-6.173)
C8: (94.979,113.216,-4.691)
C2: (93.561,115.193,-1.058)
C6: (94.750,113.051,-1.178)
C5: (94.732,113.281,-2.578)
C4: (94.165,114.445,-3.054)
P: (94.636,112.259,-8.987)
C4': (93.193,115.595,-7.533)
C2': (95.228,115.796,-6.321)
O2': (96.185,116.682,-5.779)
N1: (94.122,114.078,-0.486)
N2: (92.986,116.062,-0.212)
N3: (93.562,115.435,-2.357)
N7: (95.222,112.507,-3.622)
N9: (94.375,114.422,-4.415)
O5': (94.442,113.649,-8.235)
O3': (94.253,117.791,-7.361)
OP2: (95.488,111.330,-8.183)
C3': (94.489,116.395,-7.509)
C1': (94.075,115.498,-5.360)
C5': (93.251,114.425,-8.475)
O6: (95.249,112.109,-0.556)
O4': (92.986,115.106,-6.173)
C8: (94.979,113.216,-4.691)
C2: (93.561,115.193,-1.058)
C6: (94.750,113.051,-1.178)
C5: (94.732,113.281,-2.578)
C4: (94.165,114.445,-3.054)
P: (94.636,112.259,-8.987)
C4': (93.193,115.595,-7.533)
C2': (95.228,115.796,-6.321)
O2': (96.185,116.682,-5.779)
N1: (94.122,114.078,-0.486)
N2: (92.986,116.062,-0.212)
N3: (93.562,115.435,-2.357)
N7: (95.222,112.507,-3.622)
N9: (94.375,114.422,-4.415)
O5': (94.442,113.649,-8.235)
O3': (94.253,117.791,-7.361)
OP1: (94.445,118.264,-9.796)
OP2: (96.288,119.055,-8.182)
C3': (92.960,122.706,-7.843)
C1': (92.853,122.050,-5.593)
C5': (92.672,120.293,-8.518)
O4': (92.096,121.104,-6.319)
C8: (94.179,120.233,-4.349)
O2': (94.386,123.832,-6.171)
C6: (94.093,121.173,-0.966)
C5: (94.038,120.931,-2.348)
C4: (93.353,121.857,-3.120)
P: (94.849,118.799,-8.464)
C4': (92.113,121.447,-7.736)
C2': (93.845,122.606,-6.606)
C2: (92.854,123.087,-1.363)
N1: (93.478,122.284,-0.496)
N3: (92.731,122.968,-2.682)
N6: (94.717,120.375,-0.097)
N7: (94.555,119.912,-3.137)
N9: (93.442,121.401,-4.415)
O5': (94.071,120.166,-8.232)
O3': (92.104,123.826,-7.733)
OP2: (96.288,119.055,-8.182)
C3': (92.960,122.706,-7.843)
C1': (92.853,122.050,-5.593)
C5': (92.672,120.293,-8.518)
O4': (92.096,121.104,-6.319)
C8: (94.179,120.233,-4.349)
O2': (94.386,123.832,-6.171)
C6: (94.093,121.173,-0.966)
C5: (94.038,120.931,-2.348)
C4: (93.353,121.857,-3.120)
P: (94.849,118.799,-8.464)
C4': (92.113,121.447,-7.736)
C2': (93.845,122.606,-6.606)
C2: (92.854,123.087,-1.363)
N1: (93.478,122.284,-0.496)
N3: (92.731,122.968,-2.682)
N6: (94.717,120.375,-0.097)
N7: (94.555,119.912,-3.137)
N9: (93.442,121.401,-4.415)
O5': (94.071,120.166,-8.232)
O3': (92.104,123.826,-7.733)
Image (generated by PyMOL):