Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SDS:E10:E11
Extra
PDB:
ATOM 1 O3' U A 9 7.088 7.493 57.727 1.00 27.54 O
ATOM 2 P G A 10 6.244 8.252 58.865 1.00 29.04 P
ATOM 3 OP1 G A 10 4.868 7.743 58.688 1.00 28.34 O
ATOM 4 OP2 G A 10 6.499 9.715 58.802 1.00 30.12 O
ATOM 5 O5' G A 10 6.819 7.687 60.236 1.00 25.26 O
ATOM 6 C5' G A 10 6.823 6.289 60.505 1.00 25.78 C
ATOM 7 C4' G A 10 7.263 6.033 61.925 1.00 26.83 C
ATOM 8 O4' G A 10 8.549 6.664 62.147 1.00 26.93 O
ATOM 9 C3' G A 10 6.299 6.678 62.927 1.00 26.24 C
ATOM 10 O3' G A 10 6.144 5.790 64.031 1.00 29.47 O
ATOM 11 C2' G A 10 6.933 8.020 63.295 1.00 30.35 C
ATOM 12 O2' G A 10 6.774 8.398 64.648 1.00 30.42 O
ATOM 13 C1' G A 10 8.411 7.714 63.074 1.00 26.56 C
ATOM 14 N9 G A 10 9.295 8.816 62.734 1.00 26.88 N
ATOM 15 C8 G A 10 9.201 9.687 61.678 1.00 27.49 C
ATOM 16 N7 G A 10 10.126 10.606 61.694 1.00 25.93 N
ATOM 17 C5 G A 10 10.881 10.312 62.821 1.00 28.08 C
ATOM 18 C6 G A 10 12.011 10.964 63.362 1.00 26.99 C
ATOM 19 O6 G A 10 12.589 11.972 62.946 1.00 29.14 O
ATOM 20 N1 G A 10 12.465 10.329 64.513 1.00 26.90 N
ATOM 21 C2 G A 10 11.902 9.212 65.077 1.00 26.08 C
ATOM 22 N2 G A 10 12.489 8.748 66.191 1.00 22.50 N
ATOM 23 N3 G A 10 10.842 8.599 64.586 1.00 25.18 N
ATOM 24 C4 G A 10 10.387 9.202 63.464 1.00 26.44 C
ATOM 25 P A A 11 4.736 5.628 64.782 1.00 29.41 P
ATOM 26 OP1 A A 11 3.663 5.430 63.781 1.00 32.08 O
ATOM 27 OP2 A A 11 4.617 6.712 65.785 1.00 31.22 O
ATOM 28 O5' A A 11 4.945 4.250 65.548 1.00 30.79 O
TER
ATOM 1 O3' G B 10 6.144 5.790 64.031 1.00 29.47 O
ATOM 2 P A B 11 4.736 5.628 64.782 1.00 29.41 P
ATOM 3 OP1 A B 11 3.663 5.430 63.781 1.00 32.08 O
ATOM 4 OP2 A B 11 4.617 6.712 65.785 1.00 31.22 O
ATOM 5 O5' A B 11 4.945 4.250 65.548 1.00 30.79 O
ATOM 6 C5' A B 11 5.079 3.031 64.815 1.00 29.49 C
ATOM 7 C4' A B 11 5.874 2.020 65.609 1.00 28.07 C
ATOM 8 O4' A B 11 7.294 2.319 65.546 1.00 25.40 O
ATOM 9 C3' A B 11 5.556 1.969 67.092 1.00 26.44 C
ATOM 10 O3' A B 11 4.427 1.136 67.327 1.00 27.01 O
ATOM 11 C2' A B 11 6.824 1.346 67.654 1.00 25.29 C
ATOM 12 O2' A B 11 6.852 -0.047 67.419 1.00 26.22 O
ATOM 13 C1' A B 11 7.893 2.026 66.796 1.00 24.48 C
ATOM 14 N9 A B 11 8.355 3.286 67.371 1.00 23.49 N
ATOM 15 C8 A B 11 8.187 4.541 66.846 1.00 22.30 C
ATOM 16 N7 A B 11 8.718 5.493 67.572 1.00 23.33 N
ATOM 17 C5 A B 11 9.274 4.821 68.650 1.00 24.63 C
ATOM 18 C6 A B 11 9.990 5.268 69.777 1.00 23.61 C
ATOM 19 N6 A B 11 10.274 6.553 70.016 1.00 23.49 N
ATOM 20 N1 A B 11 10.407 4.340 70.660 1.00 24.64 N
ATOM 21 C2 A B 11 10.122 3.052 70.420 1.00 24.98 C
ATOM 22 N3 A B 11 9.456 2.509 69.402 1.00 24.65 N
ATOM 23 C4 A B 11 9.055 3.459 68.541 1.00 23.40 C
ATOM 24 P G B 12 3.280 1.611 68.346 1.00 30.15 P
ATOM 25 OP1 G B 12 2.288 0.512 68.375 1.00 33.85 O
ATOM 26 OP2 G B 12 2.848 2.987 67.992 1.00 32.17 O
ATOM 27 O5' G B 12 4.007 1.664 69.760 1.00 27.41 O
TER
ATOM 2 P G A 10 6.244 8.252 58.865 1.00 29.04 P
ATOM 3 OP1 G A 10 4.868 7.743 58.688 1.00 28.34 O
ATOM 4 OP2 G A 10 6.499 9.715 58.802 1.00 30.12 O
ATOM 5 O5' G A 10 6.819 7.687 60.236 1.00 25.26 O
ATOM 6 C5' G A 10 6.823 6.289 60.505 1.00 25.78 C
ATOM 7 C4' G A 10 7.263 6.033 61.925 1.00 26.83 C
ATOM 8 O4' G A 10 8.549 6.664 62.147 1.00 26.93 O
ATOM 9 C3' G A 10 6.299 6.678 62.927 1.00 26.24 C
ATOM 10 O3' G A 10 6.144 5.790 64.031 1.00 29.47 O
ATOM 11 C2' G A 10 6.933 8.020 63.295 1.00 30.35 C
ATOM 12 O2' G A 10 6.774 8.398 64.648 1.00 30.42 O
ATOM 13 C1' G A 10 8.411 7.714 63.074 1.00 26.56 C
ATOM 14 N9 G A 10 9.295 8.816 62.734 1.00 26.88 N
ATOM 15 C8 G A 10 9.201 9.687 61.678 1.00 27.49 C
ATOM 16 N7 G A 10 10.126 10.606 61.694 1.00 25.93 N
ATOM 17 C5 G A 10 10.881 10.312 62.821 1.00 28.08 C
ATOM 18 C6 G A 10 12.011 10.964 63.362 1.00 26.99 C
ATOM 19 O6 G A 10 12.589 11.972 62.946 1.00 29.14 O
ATOM 20 N1 G A 10 12.465 10.329 64.513 1.00 26.90 N
ATOM 21 C2 G A 10 11.902 9.212 65.077 1.00 26.08 C
ATOM 22 N2 G A 10 12.489 8.748 66.191 1.00 22.50 N
ATOM 23 N3 G A 10 10.842 8.599 64.586 1.00 25.18 N
ATOM 24 C4 G A 10 10.387 9.202 63.464 1.00 26.44 C
ATOM 25 P A A 11 4.736 5.628 64.782 1.00 29.41 P
ATOM 26 OP1 A A 11 3.663 5.430 63.781 1.00 32.08 O
ATOM 27 OP2 A A 11 4.617 6.712 65.785 1.00 31.22 O
ATOM 28 O5' A A 11 4.945 4.250 65.548 1.00 30.79 O
TER
ATOM 1 O3' G B 10 6.144 5.790 64.031 1.00 29.47 O
ATOM 2 P A B 11 4.736 5.628 64.782 1.00 29.41 P
ATOM 3 OP1 A B 11 3.663 5.430 63.781 1.00 32.08 O
ATOM 4 OP2 A B 11 4.617 6.712 65.785 1.00 31.22 O
ATOM 5 O5' A B 11 4.945 4.250 65.548 1.00 30.79 O
ATOM 6 C5' A B 11 5.079 3.031 64.815 1.00 29.49 C
ATOM 7 C4' A B 11 5.874 2.020 65.609 1.00 28.07 C
ATOM 8 O4' A B 11 7.294 2.319 65.546 1.00 25.40 O
ATOM 9 C3' A B 11 5.556 1.969 67.092 1.00 26.44 C
ATOM 10 O3' A B 11 4.427 1.136 67.327 1.00 27.01 O
ATOM 11 C2' A B 11 6.824 1.346 67.654 1.00 25.29 C
ATOM 12 O2' A B 11 6.852 -0.047 67.419 1.00 26.22 O
ATOM 13 C1' A B 11 7.893 2.026 66.796 1.00 24.48 C
ATOM 14 N9 A B 11 8.355 3.286 67.371 1.00 23.49 N
ATOM 15 C8 A B 11 8.187 4.541 66.846 1.00 22.30 C
ATOM 16 N7 A B 11 8.718 5.493 67.572 1.00 23.33 N
ATOM 17 C5 A B 11 9.274 4.821 68.650 1.00 24.63 C
ATOM 18 C6 A B 11 9.990 5.268 69.777 1.00 23.61 C
ATOM 19 N6 A B 11 10.274 6.553 70.016 1.00 23.49 N
ATOM 20 N1 A B 11 10.407 4.340 70.660 1.00 24.64 N
ATOM 21 C2 A B 11 10.122 3.052 70.420 1.00 24.98 C
ATOM 22 N3 A B 11 9.456 2.509 69.402 1.00 24.65 N
ATOM 23 C4 A B 11 9.055 3.459 68.541 1.00 23.40 C
ATOM 24 P G B 12 3.280 1.611 68.346 1.00 30.15 P
ATOM 25 OP1 G B 12 2.288 0.512 68.375 1.00 33.85 O
ATOM 26 OP2 G B 12 2.848 2.987 67.992 1.00 32.17 O
ATOM 27 O5' G B 12 4.007 1.664 69.760 1.00 27.41 O
TER
Atoms:
OP1: (4.868,7.743,58.688)
OP2: (6.499,9.715,58.802)
C3': (6.299,6.678,62.927)
C1': (8.411,7.714,63.074)
C5': (6.823,6.289,60.505)
O6: (12.589,11.972,62.946)
O4': (8.549,6.664,62.147)
C8: (9.201,9.687,61.678)
C2: (11.902,9.212,65.077)
C6: (12.011,10.964,63.362)
C5: (10.881,10.312,62.821)
C4: (10.387,9.202,63.464)
P: (6.244,8.252,58.865)
C4': (7.263,6.033,61.925)
C2': (6.933,8.020,63.295)
O2': (6.774,8.398,64.648)
N1: (12.465,10.329,64.513)
N2: (12.489,8.748,66.191)
N3: (10.842,8.599,64.586)
N7: (10.126,10.606,61.694)
N9: (9.295,8.816,62.734)
O5': (6.819,7.687,60.236)
O3': (6.144,5.790,64.031)
OP2: (6.499,9.715,58.802)
C3': (6.299,6.678,62.927)
C1': (8.411,7.714,63.074)
C5': (6.823,6.289,60.505)
O6: (12.589,11.972,62.946)
O4': (8.549,6.664,62.147)
C8: (9.201,9.687,61.678)
C2: (11.902,9.212,65.077)
C6: (12.011,10.964,63.362)
C5: (10.881,10.312,62.821)
C4: (10.387,9.202,63.464)
P: (6.244,8.252,58.865)
C4': (7.263,6.033,61.925)
C2': (6.933,8.020,63.295)
O2': (6.774,8.398,64.648)
N1: (12.465,10.329,64.513)
N2: (12.489,8.748,66.191)
N3: (10.842,8.599,64.586)
N7: (10.126,10.606,61.694)
N9: (9.295,8.816,62.734)
O5': (6.819,7.687,60.236)
O3': (6.144,5.790,64.031)
OP1: (3.663,5.430,63.781)
OP2: (4.617,6.712,65.785)
C3': (5.556,1.969,67.092)
C1': (7.893,2.026,66.796)
C5': (5.079,3.031,64.815)
O4': (7.294,2.319,65.546)
C8: (8.187,4.541,66.846)
O2': (6.852,-0.047,67.419)
C6: (9.990,5.268,69.777)
C5: (9.274,4.821,68.650)
C4: (9.055,3.459,68.541)
P: (4.736,5.628,64.782)
C4': (5.874,2.020,65.609)
C2': (6.824,1.346,67.654)
C2: (10.122,3.052,70.420)
N1: (10.407,4.340,70.660)
N3: (9.456,2.509,69.402)
N6: (10.274,6.553,70.016)
N7: (8.718,5.493,67.572)
N9: (8.355,3.286,67.371)
O5': (4.945,4.250,65.548)
O3': (4.427,1.136,67.327)
OP2: (4.617,6.712,65.785)
C3': (5.556,1.969,67.092)
C1': (7.893,2.026,66.796)
C5': (5.079,3.031,64.815)
O4': (7.294,2.319,65.546)
C8: (8.187,4.541,66.846)
O2': (6.852,-0.047,67.419)
C6: (9.990,5.268,69.777)
C5: (9.274,4.821,68.650)
C4: (9.055,3.459,68.541)
P: (4.736,5.628,64.782)
C4': (5.874,2.020,65.609)
C2': (6.824,1.346,67.654)
C2: (10.122,3.052,70.420)
N1: (10.407,4.340,70.660)
N3: (9.456,2.509,69.402)
N6: (10.274,6.553,70.016)
N7: (8.718,5.493,67.572)
N9: (8.355,3.286,67.371)
O5': (4.945,4.250,65.548)
O3': (4.427,1.136,67.327)
Image (generated by PyMOL):