ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01082:01197

Extra

PDB:
ATOM 1 O3' U A1081 31.790 102.701 124.792 1.00 46.70 O
ATOM 2 P A A1082 32.330 103.347 123.422 1.00 45.23 P
ATOM 3 OP1 A A1082 32.162 104.824 123.470 1.00 42.89 O
ATOM 4 OP2 A A1082 31.701 102.570 122.323 1.00 47.78 O
ATOM 5 O5' A A1082 33.887 103.026 123.428 1.00 46.85 O
ATOM 6 C5' A A1082 34.366 101.672 123.519 1.00 49.57 C
ATOM 7 C4' A A1082 35.255 101.364 122.338 1.00 52.58 C
ATOM 8 O4' A A1082 36.283 102.385 122.226 1.00 53.79 O
ATOM 9 C3' A A1082 35.987 100.027 122.376 1.00 53.50 C
ATOM 10 O3' A A1082 36.157 99.574 121.034 1.00 56.51 O
ATOM 11 C2' A A1082 37.340 100.421 122.963 1.00 52.89 C
ATOM 12 O2' A A1082 38.382 99.533 122.616 1.00 54.57 O
ATOM 13 C1' A A1082 37.561 101.788 122.312 1.00 52.43 C
ATOM 14 N9 A A1082 38.438 102.711 123.040 1.00 51.06 N
ATOM 15 C8 A A1082 38.942 102.609 124.318 1.00 49.53 C
ATOM 16 N7 A A1082 39.697 103.621 124.670 1.00 49.06 N
ATOM 17 C5 A A1082 39.693 104.445 123.552 1.00 49.67 C
ATOM 18 C6 A A1082 40.310 105.679 123.283 1.00 49.01 C
ATOM 19 N6 A A1082 41.080 106.330 124.161 1.00 48.58 N
ATOM 20 N1 A A1082 40.107 106.231 122.066 1.00 48.64 N
ATOM 21 C2 A A1082 39.335 105.582 121.190 1.00 48.96 C
ATOM 22 N3 A A1082 38.700 104.421 121.324 1.00 50.10 N
ATOM 23 C4 A A1082 38.924 103.896 122.541 1.00 50.32 C
ATOM 24 P A A1083 34.919 98.908 120.241 1.00 57.50 P
ATOM 25 OP1 A A1083 35.159 99.209 118.811 1.00 58.18 O
ATOM 26 OP2 A A1083 33.629 99.305 120.870 1.00 58.04 O
ATOM 27 O5' A A1083 35.115 97.346 120.462 1.00 53.06 O
TER

ATOM 1 O3' U B1196 39.583 111.002 126.223 1.00 46.47 O
ATOM 2 P C B1197 40.233 109.579 125.857 1.00 49.16 P
ATOM 3 OP1 C B1197 40.827 109.083 127.129 1.00 49.57 O
ATOM 4 OP2 C B1197 41.068 109.648 124.631 1.00 48.28 O
ATOM 5 O5' C B1197 38.985 108.653 125.519 1.00 49.52 O
ATOM 6 C5' C B1197 38.225 108.822 124.309 1.00 44.25 C
ATOM 7 C4' C B1197 37.068 107.862 124.316 1.00 43.28 C
ATOM 8 O4' C B1197 36.312 108.047 125.539 1.00 39.82 O
ATOM 9 C3' C B1197 36.049 108.020 123.208 1.00 42.95 C
ATOM 10 O3' C B1197 36.463 107.264 122.085 1.00 50.30 O
ATOM 11 C2' C B1197 34.816 107.369 123.820 1.00 41.48 C
ATOM 12 O2' C B1197 34.879 105.957 123.737 1.00 41.28 O
ATOM 13 C1' C B1197 34.944 107.784 125.293 1.00 38.90 C
ATOM 14 N1 C B1197 34.156 108.982 125.636 1.00 34.88 N
ATOM 15 C2 C B1197 32.774 108.852 125.754 1.00 33.93 C
ATOM 16 O2 C B1197 32.268 107.728 125.619 1.00 34.55 O
ATOM 17 N3 C B1197 32.026 109.945 126.010 1.00 33.07 N
ATOM 18 C4 C B1197 32.613 111.132 126.155 1.00 32.89 C
ATOM 19 N4 C B1197 31.835 112.188 126.377 1.00 32.03 N
ATOM 20 C5 C B1197 34.027 111.289 126.073 1.00 32.26 C
ATOM 21 C6 C B1197 34.752 110.200 125.819 1.00 30.81 C
ATOM 22 P G B1198 36.998 108.000 120.762 1.00 53.67 P
ATOM 23 OP1 G B1198 36.839 107.012 119.650 1.00 51.00 O
ATOM 24 OP2 G B1198 38.342 108.567 121.070 1.00 53.05 O
ATOM 25 O5' G B1198 36.001 109.222 120.553 1.00 49.16 O
TER

Atoms:
OP1: (32.162,104.824,123.470)
OP2: (31.701,102.570,122.323)
C3': (35.987,100.027,122.376)
C1': (37.561,101.788,122.312)
C5': (34.366,101.672,123.519)
O4': (36.283,102.385,122.226)
C8: (38.942,102.609,124.318)
O2': (38.382,99.533,122.616)
C6: (40.310,105.679,123.283)
C5: (39.693,104.445,123.552)
C4: (38.924,103.896,122.541)
P: (32.330,103.347,123.422)
C4': (35.255,101.364,122.338)
C2': (37.340,100.421,122.963)
C2: (39.335,105.582,121.190)
N1: (40.107,106.231,122.066)
N3: (38.700,104.421,121.324)
N6: (41.080,106.330,124.161)
N7: (39.697,103.621,124.670)
N9: (38.438,102.711,123.040)
O5': (33.887,103.026,123.428)
O3': (36.157,99.574,121.034)
C2: (32.774,108.852,125.754)
OP1: (40.827,109.083,127.129)
OP2: (41.068,109.648,124.631)
C4: (32.613,111.132,126.155)
O5': (38.985,108.653,125.519)
C3': (36.049,108.020,123.208)
C1': (34.944,107.784,125.293)
O4': (36.312,108.047,125.539)
C5': (38.225,108.822,124.309)
P: (40.233,109.579,125.857)
O2: (32.268,107.728,125.619)
C4': (37.068,107.862,124.316)
C2': (34.816,107.369,123.820)
O2': (34.879,105.957,123.737)
N1: (34.156,108.982,125.636)
N3: (32.026,109.945,126.010)
N4: (31.835,112.188,126.377)
C6: (34.752,110.200,125.819)
C5: (34.027,111.289,126.073)
O3': (36.463,107.264,122.085)
Image (generated by PyMOL):
PyMOL image
show in jmol