ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A50:A51

Extra

PDB:
ATOM 1 O3' G A 49 39.438 -20.071 125.594 1.00 71.14 O
ATOM 2 P A A 50 37.910 -20.307 125.140 1.00 71.04 P
ATOM 3 OP1 A A 50 37.058 -20.216 126.351 1.00 65.09 O
ATOM 4 OP2 A A 50 37.879 -21.543 124.319 1.00 74.76 O
ATOM 5 O5' A A 50 37.568 -19.073 124.187 1.00 67.94 O
ATOM 6 C5' A A 50 37.883 -17.748 124.590 1.00 70.28 C
ATOM 7 C4' A A 50 36.640 -16.888 124.625 1.00 74.81 C
ATOM 8 O4' A A 50 36.513 -16.143 123.386 1.00 75.98 O
ATOM 9 C3' A A 50 35.332 -17.635 124.753 1.00 77.53 C
ATOM 10 O3' A A 50 34.686 -17.826 126.009 1.00 80.57 O
ATOM 11 C2' A A 50 34.721 -17.748 123.362 1.00 76.86 C
ATOM 12 O2' A A 50 33.351 -17.424 123.370 1.00 83.16 O
ATOM 13 C1' A A 50 35.454 -16.649 122.590 1.00 73.57 C
ATOM 14 N9 A A 50 36.031 -17.113 121.325 1.00 77.44 N
ATOM 15 C8 A A 50 36.121 -18.404 120.866 1.00 80.39 C
ATOM 16 N7 A A 50 36.712 -18.512 119.697 1.00 77.96 N
ATOM 17 C5 A A 50 37.031 -17.206 119.362 1.00 78.41 C
ATOM 18 C6 A A 50 37.678 -16.651 118.251 1.00 80.08 C
ATOM 19 N6 A A 50 38.136 -17.370 117.230 1.00 81.39 N
ATOM 20 N1 A A 50 37.845 -15.313 118.222 1.00 83.25 N
ATOM 21 C2 A A 50 37.388 -14.588 119.250 1.00 82.35 C
ATOM 22 N3 A A 50 36.765 -14.993 120.352 1.00 84.33 N
ATOM 23 C4 A A 50 36.613 -16.331 120.350 1.00 80.17 C
ATOM 24 P A A 51 33.849 -16.628 126.671 1.00 83.46 P
ATOM 25 OP1 A A 51 33.234 -17.149 127.920 1.00 81.69 O
ATOM 26 OP2 A A 51 32.987 -16.020 125.617 1.00 74.51 O
ATOM 27 O5' A A 51 34.977 -15.569 127.063 1.00 84.90 O
TER

ATOM 1 O3' A B 50 34.686 -17.826 126.009 1.00 80.57 O
ATOM 2 P A B 51 33.849 -16.628 126.671 1.00 83.46 P
ATOM 3 OP1 A B 51 33.234 -17.149 127.920 1.00 81.69 O
ATOM 4 OP2 A B 51 32.987 -16.020 125.617 1.00 74.51 O
ATOM 5 O5' A B 51 34.977 -15.569 127.063 1.00 84.90 O
ATOM 6 C5' A B 51 35.392 -15.346 128.421 1.00 78.41 C
ATOM 7 C4' A B 51 35.492 -13.864 128.652 1.00 75.49 C
ATOM 8 O4' A B 51 36.253 -13.271 127.574 1.00 73.40 O
ATOM 9 C3' A B 51 34.127 -13.229 128.530 1.00 78.37 C
ATOM 10 O3' A B 51 33.564 -13.303 129.855 1.00 80.47 O
ATOM 11 C2' A B 51 34.400 -11.816 128.008 1.00 78.16 C
ATOM 12 O2' A B 51 34.339 -10.682 128.845 1.00 87.78 O
ATOM 13 C1' A B 51 35.727 -11.999 127.270 1.00 74.96 C
ATOM 14 N9 A B 51 35.796 -11.794 125.831 1.00 73.14 N
ATOM 15 C8 A B 51 35.280 -12.522 124.797 1.00 77.11 C
ATOM 16 N7 A B 51 35.597 -12.055 123.612 1.00 74.15 N
ATOM 17 C5 A B 51 36.363 -10.937 123.894 1.00 78.23 C
ATOM 18 C6 A B 51 37.000 -9.996 123.074 1.00 84.62 C
ATOM 19 N6 A B 51 36.969 -10.030 121.735 1.00 87.52 N
ATOM 20 N1 A B 51 37.683 -8.997 123.682 1.00 87.77 N
ATOM 21 C2 A B 51 37.717 -8.963 125.022 1.00 83.68 C
ATOM 22 N3 A B 51 37.160 -9.788 125.894 1.00 79.90 N
ATOM 23 C4 A B 51 36.487 -10.762 125.257 1.00 76.59 C
ATOM 24 P G B 52 34.231 -12.482 131.096 1.00 79.89 P
ATOM 25 OP1 G B 52 33.115 -12.056 131.982 1.00 79.08 O
ATOM 26 OP2 G B 52 35.234 -11.488 130.648 1.00 88.45 O
ATOM 27 O5' G B 52 35.160 -13.515 131.880 1.00 77.32 O
TER

Atoms:
OP1: (37.058,-20.216,126.351)
OP2: (37.879,-21.543,124.319)
C3': (35.332,-17.635,124.753)
C1': (35.454,-16.649,122.590)
C5': (37.883,-17.748,124.590)
O4': (36.513,-16.143,123.386)
C8: (36.121,-18.404,120.866)
O2': (33.351,-17.424,123.370)
C6: (37.678,-16.651,118.251)
C5: (37.031,-17.206,119.362)
C4: (36.613,-16.331,120.350)
P: (37.910,-20.307,125.140)
C4': (36.640,-16.888,124.625)
C2': (34.721,-17.748,123.362)
C2: (37.388,-14.588,119.250)
N1: (37.845,-15.313,118.222)
N3: (36.765,-14.993,120.352)
N6: (38.136,-17.370,117.230)
N7: (36.712,-18.512,119.697)
N9: (36.031,-17.113,121.325)
O5': (37.568,-19.073,124.187)
O3': (34.686,-17.826,126.009)
OP1: (33.234,-17.149,127.920)
OP2: (32.987,-16.020,125.617)
C3': (34.127,-13.229,128.530)
C1': (35.727,-11.999,127.270)
C5': (35.392,-15.346,128.421)
O4': (36.253,-13.271,127.574)
C8: (35.280,-12.522,124.797)
O2': (34.339,-10.682,128.845)
C6: (37.000,-9.996,123.074)
C5: (36.363,-10.937,123.894)
C4: (36.487,-10.762,125.257)
P: (33.849,-16.628,126.671)
C4': (35.492,-13.864,128.652)
C2': (34.400,-11.816,128.008)
C2: (37.717,-8.963,125.022)
N1: (37.683,-8.997,123.682)
N3: (37.160,-9.788,125.894)
N6: (36.969,-10.030,121.735)
N7: (35.597,-12.055,123.612)
N9: (35.796,-11.794,125.831)
O5': (34.977,-15.569,127.063)
O3': (33.564,-13.303,129.855)
Image (generated by PyMOL):
PyMOL image
show in jmol