ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:0575:0558

Extra

PDB:
ATOM 1 O3' C A 574 -13.272 87.782 114.125 1.00 57.18 O
ATOM 2 P A A 575 -13.004 88.367 112.645 1.00 57.44 P
ATOM 3 OP1 A A 575 -12.519 89.768 112.772 1.00 56.28 O
ATOM 4 OP2 A A 575 -14.209 88.082 111.821 1.00 58.47 O
ATOM 5 O5' A A 575 -11.837 87.466 112.052 1.00 56.51 O
ATOM 6 C5' A A 575 -11.689 87.330 110.628 1.00 55.36 C
ATOM 7 C4' A A 575 -10.249 87.069 110.272 1.00 53.31 C
ATOM 8 O4' A A 575 -9.434 88.173 110.755 1.00 53.12 O
ATOM 9 C3' A A 575 -9.642 85.807 110.865 1.00 51.24 C
ATOM 10 O3' A A 575 -8.672 85.330 109.953 1.00 50.48 O
ATOM 11 C2' A A 575 -8.950 86.329 112.116 1.00 51.90 C
ATOM 12 O2' A A 575 -7.889 85.487 112.522 1.00 52.21 O
ATOM 13 C1' A A 575 -8.433 87.679 111.619 1.00 52.16 C
ATOM 14 N9 A A 575 -8.194 88.684 112.655 1.00 52.13 N
ATOM 15 C8 A A 575 -9.128 89.391 113.367 1.00 52.25 C
ATOM 16 N7 A A 575 -8.611 90.236 114.227 1.00 51.70 N
ATOM 17 C5 A A 575 -7.242 90.071 114.075 1.00 51.39 C
ATOM 18 C6 A A 575 -6.140 90.677 114.707 1.00 50.94 C
ATOM 19 N6 A A 575 -6.250 91.598 115.670 1.00 51.15 N
ATOM 20 N1 A A 575 -4.904 90.296 114.316 1.00 49.96 N
ATOM 21 C2 A A 575 -4.794 89.362 113.365 1.00 50.34 C
ATOM 22 N3 A A 575 -5.752 88.713 112.704 1.00 51.89 N
ATOM 23 C4 A A 575 -6.969 89.119 113.109 1.00 52.34 C
ATOM 24 P G A 576 -8.894 83.928 109.216 1.00 52.44 P
ATOM 25 OP1 G A 576 -10.355 83.724 109.074 1.00 56.86 O
ATOM 26 OP2 G A 576 -8.075 82.913 109.921 1.00 54.92 O
ATOM 27 O5' G A 576 -8.314 84.158 107.746 1.00 53.51 O
TER

ATOM 1 O3' A B 557 -2.351 94.101 117.168 1.00 46.19 O
ATOM 2 P C B 558 -3.236 93.695 118.439 1.00 48.47 P
ATOM 3 OP1 C B 558 -2.280 93.246 119.488 1.00 49.22 O
ATOM 4 OP2 C B 558 -4.321 92.782 117.992 1.00 48.49 O
ATOM 5 O5' C B 558 -3.883 95.076 118.891 1.00 47.27 O
ATOM 6 C5' C B 558 -3.057 96.229 119.088 1.00 50.40 C
ATOM 7 C4' C B 558 -3.908 97.460 119.237 1.00 53.20 C
ATOM 8 O4' C B 558 -4.686 97.648 118.026 1.00 52.95 O
ATOM 9 C3' C B 558 -4.953 97.406 120.339 1.00 54.70 C
ATOM 10 O3' C B 558 -4.408 97.720 121.617 1.00 57.20 O
ATOM 11 C2' C B 558 -5.953 98.451 119.870 1.00 53.63 C
ATOM 12 O2' C B 558 -5.497 99.762 120.125 1.00 52.69 O
ATOM 13 C1' C B 558 -5.952 98.197 118.361 1.00 53.56 C
ATOM 14 N1 C B 558 -6.995 97.242 117.950 1.00 53.26 N
ATOM 15 C2 C B 558 -8.300 97.702 117.802 1.00 53.21 C
ATOM 16 O2 C B 558 -8.538 98.902 118.014 1.00 55.62 O
ATOM 17 N3 C B 558 -9.271 96.835 117.433 1.00 51.72 N
ATOM 18 C4 C B 558 -8.972 95.555 117.214 1.00 51.98 C
ATOM 19 N4 C B 558 -9.963 94.731 116.862 1.00 52.21 N
ATOM 20 C5 C B 558 -7.644 95.060 117.349 1.00 52.88 C
ATOM 21 C6 C B 558 -6.696 95.929 117.717 1.00 53.61 C
ATOM 22 P C B 559 -4.858 96.867 122.904 1.00 58.84 P
ATOM 23 OP1 C B 559 -4.370 97.580 124.113 1.00 57.86 O
ATOM 24 OP2 C B 559 -4.487 95.441 122.689 1.00 56.84 O
ATOM 25 O5' C B 559 -6.446 96.976 122.889 1.00 59.99 O
TER

Atoms:
OP1: (-12.519,89.768,112.772)
OP2: (-14.209,88.082,111.821)
C3': (-9.642,85.807,110.865)
C1': (-8.433,87.679,111.619)
C5': (-11.689,87.330,110.628)
O4': (-9.434,88.173,110.755)
C8: (-9.128,89.391,113.367)
O2': (-7.889,85.487,112.522)
C6: (-6.140,90.677,114.707)
C5: (-7.242,90.071,114.075)
C4: (-6.969,89.119,113.109)
P: (-13.004,88.367,112.645)
C4': (-10.249,87.069,110.272)
C2': (-8.950,86.329,112.116)
C2: (-4.794,89.362,113.365)
N1: (-4.904,90.296,114.316)
N3: (-5.752,88.713,112.704)
N6: (-6.250,91.598,115.670)
N7: (-8.611,90.236,114.227)
N9: (-8.194,88.684,112.655)
O5': (-11.837,87.466,112.052)
O3': (-8.672,85.330,109.953)
C2: (-8.300,97.702,117.802)
OP1: (-2.280,93.246,119.488)
OP2: (-4.321,92.782,117.992)
C4: (-8.972,95.555,117.214)
O5': (-3.883,95.076,118.891)
C3': (-4.953,97.406,120.339)
C1': (-5.952,98.197,118.361)
O4': (-4.686,97.648,118.026)
C5': (-3.057,96.229,119.088)
P: (-3.236,93.695,118.439)
O2: (-8.538,98.902,118.014)
C4': (-3.908,97.460,119.237)
C2': (-5.953,98.451,119.870)
O2': (-5.497,99.762,120.125)
N1: (-6.995,97.242,117.950)
N3: (-9.271,96.835,117.433)
N4: (-9.963,94.731,116.862)
C6: (-6.696,95.929,117.717)
C5: (-7.644,95.060,117.349)
O3': (-4.408,97.720,121.617)
Image (generated by PyMOL):
PyMOL image
show in jmol