Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0234:0235
Extra
PDB:
ATOM 1 O3' C A 233 92.211 111.207 -9.843 1.00 61.39 O
ATOM 2 P G A 234 93.682 111.845 -9.912 1.00 62.08 P
ATOM 3 OP1 G A 234 93.957 112.241 -11.324 1.00 64.31 O
ATOM 4 OP2 G A 234 94.614 110.911 -9.220 1.00 58.88 O
ATOM 5 O5' G A 234 93.520 113.171 -9.048 1.00 60.53 O
ATOM 6 C5' G A 234 92.363 114.011 -9.216 1.00 61.04 C
ATOM 7 C4' G A 234 92.438 115.194 -8.284 1.00 61.75 C
ATOM 8 O4' G A 234 92.236 114.744 -6.915 1.00 61.95 O
ATOM 9 C3' G A 234 93.768 115.933 -8.302 1.00 61.71 C
ATOM 10 O3' G A 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 11 C2' G A 234 94.495 115.359 -7.094 1.00 61.31 C
ATOM 12 O2' G A 234 95.456 116.234 -6.537 1.00 61.96 O
ATOM 13 C1' G A 234 93.343 115.117 -6.123 1.00 61.10 C
ATOM 14 N9 G A 234 93.631 114.031 -5.191 1.00 59.70 N
ATOM 15 C8 G A 234 94.248 112.840 -5.480 1.00 59.69 C
ATOM 16 N7 G A 234 94.435 112.091 -4.430 1.00 60.55 N
ATOM 17 C5 G A 234 93.896 112.825 -3.384 1.00 59.89 C
ATOM 18 C6 G A 234 93.825 112.530 -2.000 1.00 59.58 C
ATOM 19 O6 G A 234 94.257 111.540 -1.402 1.00 60.48 O
ATOM 20 N1 G A 234 93.182 113.539 -1.297 1.00 58.83 N
ATOM 21 C2 G A 234 92.681 114.689 -1.848 1.00 59.43 C
ATOM 22 N2 G A 234 92.085 115.536 -0.996 1.00 60.29 N
ATOM 23 N3 G A 234 92.755 114.986 -3.135 1.00 59.32 N
ATOM 24 C4 G A 234 93.373 114.015 -3.839 1.00 59.55 C
ATOM 25 P A A 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 26 OP1 A A 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 27 OP2 A A 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 28 O5' A A 235 93.237 119.654 -9.075 1.00 61.34 O
TER
ATOM 1 O3' G B 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 2 P A B 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 3 OP1 A B 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 4 OP2 A B 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 5 O5' A B 235 93.237 119.654 -9.075 1.00 61.34 O
ATOM 6 C5' A B 235 91.837 119.775 -9.407 1.00 58.83 C
ATOM 7 C4' A B 235 91.229 120.931 -8.651 1.00 59.33 C
ATOM 8 O4' A B 235 91.128 120.588 -7.236 1.00 57.96 O
ATOM 9 C3' A B 235 92.044 122.221 -8.710 1.00 58.21 C
ATOM 10 O3' A B 235 91.172 123.343 -8.611 1.00 60.39 O
ATOM 11 C2' A B 235 92.875 122.120 -7.437 1.00 57.42 C
ATOM 12 O2' A B 235 93.393 123.346 -6.965 1.00 57.54 O
ATOM 13 C1' A B 235 91.843 121.538 -6.475 1.00 56.90 C
ATOM 14 N9 A B 235 92.417 120.882 -5.303 1.00 54.80 N
ATOM 15 C8 A B 235 93.109 119.700 -5.238 1.00 54.56 C
ATOM 16 N7 A B 235 93.540 119.407 -4.038 1.00 52.41 N
ATOM 17 C5 A B 235 93.091 120.462 -3.255 1.00 52.46 C
ATOM 18 C6 A B 235 93.229 120.751 -1.886 1.00 50.13 C
ATOM 19 N6 A B 235 93.895 119.973 -1.031 1.00 48.26 N
ATOM 20 N1 A B 235 92.658 121.882 -1.424 1.00 48.90 N
ATOM 21 C2 A B 235 92.000 122.664 -2.283 1.00 50.85 C
ATOM 22 N3 A B 235 91.807 122.505 -3.588 1.00 53.51 N
ATOM 23 C4 A B 235 92.387 121.370 -4.019 1.00 53.01 C
ATOM 24 P A B 236 90.672 124.090 -9.943 1.00 61.16 P
ATOM 25 OP1 A B 236 91.747 123.964 -10.963 1.00 62.41 O
ATOM 26 OP2 A B 236 90.189 125.442 -9.550 1.00 61.21 O
ATOM 27 O5' A B 236 89.412 123.233 -10.412 1.00 58.80 O
TER
ATOM 2 P G A 234 93.682 111.845 -9.912 1.00 62.08 P
ATOM 3 OP1 G A 234 93.957 112.241 -11.324 1.00 64.31 O
ATOM 4 OP2 G A 234 94.614 110.911 -9.220 1.00 58.88 O
ATOM 5 O5' G A 234 93.520 113.171 -9.048 1.00 60.53 O
ATOM 6 C5' G A 234 92.363 114.011 -9.216 1.00 61.04 C
ATOM 7 C4' G A 234 92.438 115.194 -8.284 1.00 61.75 C
ATOM 8 O4' G A 234 92.236 114.744 -6.915 1.00 61.95 O
ATOM 9 C3' G A 234 93.768 115.933 -8.302 1.00 61.71 C
ATOM 10 O3' G A 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 11 C2' G A 234 94.495 115.359 -7.094 1.00 61.31 C
ATOM 12 O2' G A 234 95.456 116.234 -6.537 1.00 61.96 O
ATOM 13 C1' G A 234 93.343 115.117 -6.123 1.00 61.10 C
ATOM 14 N9 G A 234 93.631 114.031 -5.191 1.00 59.70 N
ATOM 15 C8 G A 234 94.248 112.840 -5.480 1.00 59.69 C
ATOM 16 N7 G A 234 94.435 112.091 -4.430 1.00 60.55 N
ATOM 17 C5 G A 234 93.896 112.825 -3.384 1.00 59.89 C
ATOM 18 C6 G A 234 93.825 112.530 -2.000 1.00 59.58 C
ATOM 19 O6 G A 234 94.257 111.540 -1.402 1.00 60.48 O
ATOM 20 N1 G A 234 93.182 113.539 -1.297 1.00 58.83 N
ATOM 21 C2 G A 234 92.681 114.689 -1.848 1.00 59.43 C
ATOM 22 N2 G A 234 92.085 115.536 -0.996 1.00 60.29 N
ATOM 23 N3 G A 234 92.755 114.986 -3.135 1.00 59.32 N
ATOM 24 C4 G A 234 93.373 114.015 -3.839 1.00 59.55 C
ATOM 25 P A A 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 26 OP1 A A 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 27 OP2 A A 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 28 O5' A A 235 93.237 119.654 -9.075 1.00 61.34 O
TER
ATOM 1 O3' G B 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 2 P A B 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 3 OP1 A B 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 4 OP2 A B 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 5 O5' A B 235 93.237 119.654 -9.075 1.00 61.34 O
ATOM 6 C5' A B 235 91.837 119.775 -9.407 1.00 58.83 C
ATOM 7 C4' A B 235 91.229 120.931 -8.651 1.00 59.33 C
ATOM 8 O4' A B 235 91.128 120.588 -7.236 1.00 57.96 O
ATOM 9 C3' A B 235 92.044 122.221 -8.710 1.00 58.21 C
ATOM 10 O3' A B 235 91.172 123.343 -8.611 1.00 60.39 O
ATOM 11 C2' A B 235 92.875 122.120 -7.437 1.00 57.42 C
ATOM 12 O2' A B 235 93.393 123.346 -6.965 1.00 57.54 O
ATOM 13 C1' A B 235 91.843 121.538 -6.475 1.00 56.90 C
ATOM 14 N9 A B 235 92.417 120.882 -5.303 1.00 54.80 N
ATOM 15 C8 A B 235 93.109 119.700 -5.238 1.00 54.56 C
ATOM 16 N7 A B 235 93.540 119.407 -4.038 1.00 52.41 N
ATOM 17 C5 A B 235 93.091 120.462 -3.255 1.00 52.46 C
ATOM 18 C6 A B 235 93.229 120.751 -1.886 1.00 50.13 C
ATOM 19 N6 A B 235 93.895 119.973 -1.031 1.00 48.26 N
ATOM 20 N1 A B 235 92.658 121.882 -1.424 1.00 48.90 N
ATOM 21 C2 A B 235 92.000 122.664 -2.283 1.00 50.85 C
ATOM 22 N3 A B 235 91.807 122.505 -3.588 1.00 53.51 N
ATOM 23 C4 A B 235 92.387 121.370 -4.019 1.00 53.01 C
ATOM 24 P A B 236 90.672 124.090 -9.943 1.00 61.16 P
ATOM 25 OP1 A B 236 91.747 123.964 -10.963 1.00 62.41 O
ATOM 26 OP2 A B 236 90.189 125.442 -9.550 1.00 61.21 O
ATOM 27 O5' A B 236 89.412 123.233 -10.412 1.00 58.80 O
TER
Atoms:
OP1: (93.957,112.241,-11.324)
OP2: (94.614,110.911,-9.220)
C3': (93.768,115.933,-8.302)
C1': (93.343,115.117,-6.123)
C5': (92.363,114.011,-9.216)
O6: (94.257,111.540,-1.402)
O4': (92.236,114.744,-6.915)
C8: (94.248,112.840,-5.480)
C2: (92.681,114.689,-1.848)
C6: (93.825,112.530,-2.000)
C5: (93.896,112.825,-3.384)
C4: (93.373,114.015,-3.839)
P: (93.682,111.845,-9.912)
C4': (92.438,115.194,-8.284)
C2': (94.495,115.359,-7.094)
O2': (95.456,116.234,-6.537)
N1: (93.182,113.539,-1.297)
N2: (92.085,115.536,-0.996)
N3: (92.755,114.986,-3.135)
N7: (94.435,112.091,-4.430)
N9: (93.631,114.031,-5.191)
O5': (93.520,113.171,-9.048)
O3': (93.557,117.326,-8.170)
OP2: (94.614,110.911,-9.220)
C3': (93.768,115.933,-8.302)
C1': (93.343,115.117,-6.123)
C5': (92.363,114.011,-9.216)
O6: (94.257,111.540,-1.402)
O4': (92.236,114.744,-6.915)
C8: (94.248,112.840,-5.480)
C2: (92.681,114.689,-1.848)
C6: (93.825,112.530,-2.000)
C5: (93.896,112.825,-3.384)
C4: (93.373,114.015,-3.839)
P: (93.682,111.845,-9.912)
C4': (92.438,115.194,-8.284)
C2': (94.495,115.359,-7.094)
O2': (95.456,116.234,-6.537)
N1: (93.182,113.539,-1.297)
N2: (92.085,115.536,-0.996)
N3: (92.755,114.986,-3.135)
N7: (94.435,112.091,-4.430)
N9: (93.631,114.031,-5.191)
O5': (93.520,113.171,-9.048)
O3': (93.557,117.326,-8.170)
OP1: (93.522,117.733,-10.628)
OP2: (95.492,118.521,-9.178)
C3': (92.044,122.221,-8.710)
C1': (91.843,121.538,-6.475)
C5': (91.837,119.775,-9.407)
O4': (91.128,120.588,-7.236)
C8: (93.109,119.700,-5.238)
O2': (93.393,123.346,-6.965)
C6: (93.229,120.751,-1.886)
C5: (93.091,120.462,-3.255)
C4: (92.387,121.370,-4.019)
P: (94.030,118.302,-9.353)
C4': (91.229,120.931,-8.651)
C2': (92.875,122.120,-7.437)
C2: (92.000,122.664,-2.283)
N1: (92.658,121.882,-1.424)
N3: (91.807,122.505,-3.588)
N6: (93.895,119.973,-1.031)
N7: (93.540,119.407,-4.038)
N9: (92.417,120.882,-5.303)
O5': (93.237,119.654,-9.075)
O3': (91.172,123.343,-8.611)
OP2: (95.492,118.521,-9.178)
C3': (92.044,122.221,-8.710)
C1': (91.843,121.538,-6.475)
C5': (91.837,119.775,-9.407)
O4': (91.128,120.588,-7.236)
C8: (93.109,119.700,-5.238)
O2': (93.393,123.346,-6.965)
C6: (93.229,120.751,-1.886)
C5: (93.091,120.462,-3.255)
C4: (92.387,121.370,-4.019)
P: (94.030,118.302,-9.353)
C4': (91.229,120.931,-8.651)
C2': (92.875,122.120,-7.437)
C2: (92.000,122.664,-2.283)
N1: (92.658,121.882,-1.424)
N3: (91.807,122.505,-3.588)
N6: (93.895,119.973,-1.031)
N7: (93.540,119.407,-4.038)
N9: (92.417,120.882,-5.303)
O5': (93.237,119.654,-9.075)
O3': (91.172,123.343,-8.611)
Image (generated by PyMOL):