Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0234:0235
Extra
PDB:
ATOM 1 O3' C A 233 92.674 111.399 -9.663 1.00 49.72 O
ATOM 2 P G A 234 94.142 112.042 -9.708 1.00 52.04 P
ATOM 3 OP1 G A 234 94.444 112.415 -11.119 1.00 54.39 O
ATOM 4 OP2 G A 234 95.062 111.128 -8.978 1.00 48.94 O
ATOM 5 O5' G A 234 93.952 113.384 -8.876 1.00 50.00 O
ATOM 6 C5' G A 234 92.803 114.220 -9.106 1.00 50.37 C
ATOM 7 C4' G A 234 92.825 115.398 -8.172 1.00 51.57 C
ATOM 8 O4' G A 234 92.586 114.926 -6.816 1.00 53.18 O
ATOM 9 C3' G A 234 94.149 116.151 -8.143 1.00 51.72 C
ATOM 10 O3' G A 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 11 C2' G A 234 94.845 115.565 -6.921 1.00 51.67 C
ATOM 12 O2' G A 234 95.786 116.433 -6.324 1.00 51.48 O
ATOM 13 C1' G A 234 93.668 115.292 -5.987 1.00 51.42 C
ATOM 14 N9 G A 234 93.950 114.191 -5.071 1.00 51.30 N
ATOM 15 C8 G A 234 94.547 112.993 -5.382 1.00 51.34 C
ATOM 16 N7 G A 234 94.778 112.249 -4.337 1.00 52.57 N
ATOM 17 C5 G A 234 94.284 112.988 -3.272 1.00 51.72 C
ATOM 18 C6 G A 234 94.288 112.707 -1.881 1.00 51.88 C
ATOM 19 O6 G A 234 94.773 111.730 -1.294 1.00 49.81 O
ATOM 20 N1 G A 234 93.663 113.717 -1.155 1.00 51.51 N
ATOM 21 C2 G A 234 93.118 114.858 -1.696 1.00 51.17 C
ATOM 22 N2 G A 234 92.538 115.706 -0.833 1.00 50.16 N
ATOM 23 N3 G A 234 93.137 115.144 -2.987 1.00 51.16 N
ATOM 24 C4 G A 234 93.732 114.172 -3.712 1.00 51.40 C
ATOM 25 P A A 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 26 OP1 A A 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 27 OP2 A A 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 28 O5' A A 235 93.691 119.896 -8.855 1.00 50.53 O
TER
ATOM 1 O3' G B 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 2 P A B 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 3 OP1 A B 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 4 OP2 A B 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 5 O5' A B 235 93.691 119.896 -8.855 1.00 50.53 O
ATOM 6 C5' A B 235 92.280 120.000 -9.140 1.00 50.54 C
ATOM 7 C4' A B 235 91.684 121.160 -8.378 1.00 50.98 C
ATOM 8 O4' A B 235 91.578 120.823 -6.962 1.00 50.06 O
ATOM 9 C3' A B 235 92.518 122.435 -8.446 1.00 49.99 C
ATOM 10 O3' A B 235 91.664 123.564 -8.378 1.00 50.11 O
ATOM 11 C2' A B 235 93.348 122.337 -7.173 1.00 49.87 C
ATOM 12 O2' A B 235 93.858 123.570 -6.715 1.00 49.77 O
ATOM 13 C1' A B 235 92.318 121.759 -6.204 1.00 50.09 C
ATOM 14 N9 A B 235 92.908 121.081 -5.050 1.00 49.79 N
ATOM 15 C8 A B 235 93.645 119.921 -5.022 1.00 49.51 C
ATOM 16 N7 A B 235 94.070 119.596 -3.827 1.00 48.53 N
ATOM 17 C5 A B 235 93.571 120.602 -3.010 1.00 47.10 C
ATOM 18 C6 A B 235 93.675 120.838 -1.631 1.00 44.62 C
ATOM 19 N6 A B 235 94.343 120.043 -0.796 1.00 43.19 N
ATOM 20 N1 A B 235 93.062 121.931 -1.133 1.00 43.84 N
ATOM 21 C2 A B 235 92.391 122.727 -1.970 1.00 44.52 C
ATOM 22 N3 A B 235 92.220 122.613 -3.282 1.00 46.98 N
ATOM 23 C4 A B 235 92.845 121.517 -3.748 1.00 47.72 C
ATOM 24 P A B 236 91.155 124.252 -9.732 1.00 52.03 P
ATOM 25 OP1 A B 236 92.218 124.059 -10.751 1.00 51.48 O
ATOM 26 OP2 A B 236 90.681 125.627 -9.405 1.00 51.81 O
ATOM 27 O5' A B 236 89.885 123.388 -10.159 1.00 50.44 O
TER
ATOM 2 P G A 234 94.142 112.042 -9.708 1.00 52.04 P
ATOM 3 OP1 G A 234 94.444 112.415 -11.119 1.00 54.39 O
ATOM 4 OP2 G A 234 95.062 111.128 -8.978 1.00 48.94 O
ATOM 5 O5' G A 234 93.952 113.384 -8.876 1.00 50.00 O
ATOM 6 C5' G A 234 92.803 114.220 -9.106 1.00 50.37 C
ATOM 7 C4' G A 234 92.825 115.398 -8.172 1.00 51.57 C
ATOM 8 O4' G A 234 92.586 114.926 -6.816 1.00 53.18 O
ATOM 9 C3' G A 234 94.149 116.151 -8.143 1.00 51.72 C
ATOM 10 O3' G A 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 11 C2' G A 234 94.845 115.565 -6.921 1.00 51.67 C
ATOM 12 O2' G A 234 95.786 116.433 -6.324 1.00 51.48 O
ATOM 13 C1' G A 234 93.668 115.292 -5.987 1.00 51.42 C
ATOM 14 N9 G A 234 93.950 114.191 -5.071 1.00 51.30 N
ATOM 15 C8 G A 234 94.547 112.993 -5.382 1.00 51.34 C
ATOM 16 N7 G A 234 94.778 112.249 -4.337 1.00 52.57 N
ATOM 17 C5 G A 234 94.284 112.988 -3.272 1.00 51.72 C
ATOM 18 C6 G A 234 94.288 112.707 -1.881 1.00 51.88 C
ATOM 19 O6 G A 234 94.773 111.730 -1.294 1.00 49.81 O
ATOM 20 N1 G A 234 93.663 113.717 -1.155 1.00 51.51 N
ATOM 21 C2 G A 234 93.118 114.858 -1.696 1.00 51.17 C
ATOM 22 N2 G A 234 92.538 115.706 -0.833 1.00 50.16 N
ATOM 23 N3 G A 234 93.137 115.144 -2.987 1.00 51.16 N
ATOM 24 C4 G A 234 93.732 114.172 -3.712 1.00 51.40 C
ATOM 25 P A A 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 26 OP1 A A 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 27 OP2 A A 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 28 O5' A A 235 93.691 119.896 -8.855 1.00 50.53 O
TER
ATOM 1 O3' G B 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 2 P A B 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 3 OP1 A B 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 4 OP2 A B 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 5 O5' A B 235 93.691 119.896 -8.855 1.00 50.53 O
ATOM 6 C5' A B 235 92.280 120.000 -9.140 1.00 50.54 C
ATOM 7 C4' A B 235 91.684 121.160 -8.378 1.00 50.98 C
ATOM 8 O4' A B 235 91.578 120.823 -6.962 1.00 50.06 O
ATOM 9 C3' A B 235 92.518 122.435 -8.446 1.00 49.99 C
ATOM 10 O3' A B 235 91.664 123.564 -8.378 1.00 50.11 O
ATOM 11 C2' A B 235 93.348 122.337 -7.173 1.00 49.87 C
ATOM 12 O2' A B 235 93.858 123.570 -6.715 1.00 49.77 O
ATOM 13 C1' A B 235 92.318 121.759 -6.204 1.00 50.09 C
ATOM 14 N9 A B 235 92.908 121.081 -5.050 1.00 49.79 N
ATOM 15 C8 A B 235 93.645 119.921 -5.022 1.00 49.51 C
ATOM 16 N7 A B 235 94.070 119.596 -3.827 1.00 48.53 N
ATOM 17 C5 A B 235 93.571 120.602 -3.010 1.00 47.10 C
ATOM 18 C6 A B 235 93.675 120.838 -1.631 1.00 44.62 C
ATOM 19 N6 A B 235 94.343 120.043 -0.796 1.00 43.19 N
ATOM 20 N1 A B 235 93.062 121.931 -1.133 1.00 43.84 N
ATOM 21 C2 A B 235 92.391 122.727 -1.970 1.00 44.52 C
ATOM 22 N3 A B 235 92.220 122.613 -3.282 1.00 46.98 N
ATOM 23 C4 A B 235 92.845 121.517 -3.748 1.00 47.72 C
ATOM 24 P A B 236 91.155 124.252 -9.732 1.00 52.03 P
ATOM 25 OP1 A B 236 92.218 124.059 -10.751 1.00 51.48 O
ATOM 26 OP2 A B 236 90.681 125.627 -9.405 1.00 51.81 O
ATOM 27 O5' A B 236 89.885 123.388 -10.159 1.00 50.44 O
TER
Atoms:
OP1: (94.444,112.415,-11.119)
OP2: (95.062,111.128,-8.978)
C3': (94.149,116.151,-8.143)
C1': (93.668,115.292,-5.987)
C5': (92.803,114.220,-9.106)
O6: (94.773,111.730,-1.294)
O4': (92.586,114.926,-6.816)
C8: (94.547,112.993,-5.382)
C2: (93.118,114.858,-1.696)
C6: (94.288,112.707,-1.881)
C5: (94.284,112.988,-3.272)
C4: (93.732,114.172,-3.712)
P: (94.142,112.042,-9.708)
C4': (92.825,115.398,-8.172)
C2': (94.845,115.565,-6.921)
O2': (95.786,116.433,-6.324)
N1: (93.663,113.717,-1.155)
N2: (92.538,115.706,-0.833)
N3: (93.137,115.144,-2.987)
N7: (94.778,112.249,-4.337)
N9: (93.950,114.191,-5.071)
O5': (93.952,113.384,-8.876)
O3': (93.927,117.543,-8.003)
OP2: (95.062,111.128,-8.978)
C3': (94.149,116.151,-8.143)
C1': (93.668,115.292,-5.987)
C5': (92.803,114.220,-9.106)
O6: (94.773,111.730,-1.294)
O4': (92.586,114.926,-6.816)
C8: (94.547,112.993,-5.382)
C2: (93.118,114.858,-1.696)
C6: (94.288,112.707,-1.881)
C5: (94.284,112.988,-3.272)
C4: (93.732,114.172,-3.712)
P: (94.142,112.042,-9.708)
C4': (92.825,115.398,-8.172)
C2': (94.845,115.565,-6.921)
O2': (95.786,116.433,-6.324)
N1: (93.663,113.717,-1.155)
N2: (92.538,115.706,-0.833)
N3: (93.137,115.144,-2.987)
N7: (94.778,112.249,-4.337)
N9: (93.950,114.191,-5.071)
O5': (93.952,113.384,-8.876)
O3': (93.927,117.543,-8.003)
OP1: (94.033,118.008,-10.446)
OP2: (95.929,118.757,-8.878)
C3': (92.518,122.435,-8.446)
C1': (92.318,121.759,-6.204)
C5': (92.280,120.000,-9.140)
O4': (91.578,120.823,-6.962)
C8: (93.645,119.921,-5.022)
O2': (93.858,123.570,-6.715)
C6: (93.675,120.838,-1.631)
C5: (93.571,120.602,-3.010)
C4: (92.845,121.517,-3.748)
P: (94.479,118.543,-9.132)
C4': (91.684,121.160,-8.378)
C2': (93.348,122.337,-7.173)
C2: (92.391,122.727,-1.970)
N1: (93.062,121.931,-1.133)
N3: (92.220,122.613,-3.282)
N6: (94.343,120.043,-0.796)
N7: (94.070,119.596,-3.827)
N9: (92.908,121.081,-5.050)
O5': (93.691,119.896,-8.855)
O3': (91.664,123.564,-8.378)
OP2: (95.929,118.757,-8.878)
C3': (92.518,122.435,-8.446)
C1': (92.318,121.759,-6.204)
C5': (92.280,120.000,-9.140)
O4': (91.578,120.823,-6.962)
C8: (93.645,119.921,-5.022)
O2': (93.858,123.570,-6.715)
C6: (93.675,120.838,-1.631)
C5: (93.571,120.602,-3.010)
C4: (92.845,121.517,-3.748)
P: (94.479,118.543,-9.132)
C4': (91.684,121.160,-8.378)
C2': (93.348,122.337,-7.173)
C2: (92.391,122.727,-1.970)
N1: (93.062,121.931,-1.133)
N3: (92.220,122.613,-3.282)
N6: (94.343,120.043,-0.796)
N7: (94.070,119.596,-3.827)
N9: (92.908,121.081,-5.050)
O5': (93.691,119.896,-8.855)
O3': (91.664,123.564,-8.378)
Image (generated by PyMOL):