Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD1:A36:A5
Extra
PDB:
ATOM 1 O3' G A 35 -6.241 -29.636 22.256 1.00 25.95 O
ATOM 2 P G A 36 -7.820 -29.901 22.400 1.00 38.88 P
ATOM 3 OP1 G A 36 -8.379 -29.966 21.028 1.00 40.09 O
ATOM 4 OP2 G A 36 -8.351 -28.881 23.338 1.00 36.35 O
ATOM 5 O5' G A 36 -7.880 -31.340 23.078 1.00 38.14 O
ATOM 6 C5' G A 36 -9.099 -32.066 23.131 1.00 42.46 C
ATOM 7 C4' G A 36 -8.973 -33.309 23.977 1.00 44.35 C
ATOM 8 O4' G A 36 -7.982 -34.202 23.403 1.00 43.42 O
ATOM 9 C3' G A 36 -8.492 -33.102 25.403 1.00 42.78 C
ATOM 10 O3' G A 36 -9.516 -32.657 26.276 1.00 43.67 O
ATOM 11 C2' G A 36 -7.937 -34.472 25.761 1.00 42.23 C
ATOM 12 O2' G A 36 -8.991 -35.376 26.053 1.00 48.19 O
ATOM 13 C1' G A 36 -7.303 -34.889 24.434 1.00 38.89 C
ATOM 14 N9 G A 36 -5.871 -34.535 24.372 1.00 37.48 N
ATOM 15 C8 G A 36 -5.258 -33.698 23.470 1.00 34.61 C
ATOM 16 N7 G A 36 -3.973 -33.584 23.670 1.00 33.80 N
ATOM 17 C5 G A 36 -3.718 -34.394 24.770 1.00 35.35 C
ATOM 18 C6 G A 36 -2.502 -34.671 25.453 1.00 32.66 C
ATOM 19 O6 G A 36 -1.367 -34.243 25.214 1.00 27.80 O
ATOM 20 N1 G A 36 -2.695 -35.543 26.519 1.00 32.17 N
ATOM 21 C2 G A 36 -3.902 -36.086 26.881 1.00 34.28 C
ATOM 22 N2 G A 36 -3.885 -36.911 27.938 1.00 33.89 N
ATOM 23 N3 G A 36 -5.043 -35.838 26.254 1.00 33.99 N
ATOM 24 C4 G A 36 -4.879 -34.990 25.214 1.00 36.82 C
ATOM 25 P G A 37 -9.145 -31.792 27.579 1.00 48.85 P
ATOM 26 OP1 G A 37 -10.421 -31.306 28.157 1.00 52.02 O
ATOM 27 OP2 G A 37 -8.122 -30.797 27.172 1.00 39.61 O
ATOM 28 O5' G A 37 -8.490 -32.872 28.546 1.00 47.28 O
TER
ATOM 1 O3' A B 4 -2.014 -31.084 13.368 1.00 39.64 O
ATOM 2 P G B 5 -1.830 -29.511 13.642 1.00 35.81 P
ATOM 3 OP1 G B 5 -2.574 -28.793 12.580 1.00 35.12 O
ATOM 4 OP2 G B 5 -0.375 -29.259 13.790 1.00 34.58 O
ATOM 5 O5' G B 5 -2.560 -29.311 15.040 1.00 39.38 O
ATOM 6 C5' G B 5 -3.966 -29.473 15.156 1.00 36.01 C
ATOM 7 C4' G B 5 -4.372 -29.720 16.583 1.00 34.02 C
ATOM 8 O4' G B 5 -3.679 -30.891 17.088 1.00 34.43 O
ATOM 9 C3' G B 5 -4.016 -28.622 17.577 1.00 36.35 C
ATOM 10 O3' G B 5 -4.946 -27.551 17.575 1.00 35.83 O
ATOM 11 C2' G B 5 -3.958 -29.378 18.896 1.00 36.38 C
ATOM 12 O2' G B 5 -5.267 -29.619 19.393 1.00 35.12 O
ATOM 13 C1' G B 5 -3.360 -30.714 18.451 1.00 37.01 C
ATOM 14 N9 G B 5 -1.890 -30.746 18.598 1.00 35.02 N
ATOM 15 C8 G B 5 -0.953 -30.284 17.707 1.00 35.36 C
ATOM 16 N7 G B 5 0.276 -30.457 18.117 1.00 36.08 N
ATOM 17 C5 G B 5 0.147 -31.077 19.354 1.00 37.83 C
ATOM 18 C6 G B 5 1.137 -31.516 20.277 1.00 37.69 C
ATOM 19 O6 G B 5 2.370 -31.444 20.187 1.00 39.48 O
ATOM 20 N1 G B 5 0.562 -32.090 21.405 1.00 33.47 N
ATOM 21 C2 G B 5 -0.787 -32.231 21.617 1.00 36.36 C
ATOM 22 N2 G B 5 -1.147 -32.814 22.771 1.00 35.27 N
ATOM 23 N3 G B 5 -1.716 -31.829 20.765 1.00 35.62 N
ATOM 24 C4 G B 5 -1.184 -31.263 19.662 1.00 36.69 C
ATOM 25 P U B 6 -4.438 -26.031 17.718 1.00 38.35 P
ATOM 26 OP1 U B 6 -5.431 -25.173 17.024 1.00 38.42 O
ATOM 27 OP2 U B 6 -3.025 -25.996 17.265 1.00 38.11 O
ATOM 28 O5' U B 6 -4.508 -25.778 19.288 1.00 36.34 O
TER
ATOM 2 P G A 36 -7.820 -29.901 22.400 1.00 38.88 P
ATOM 3 OP1 G A 36 -8.379 -29.966 21.028 1.00 40.09 O
ATOM 4 OP2 G A 36 -8.351 -28.881 23.338 1.00 36.35 O
ATOM 5 O5' G A 36 -7.880 -31.340 23.078 1.00 38.14 O
ATOM 6 C5' G A 36 -9.099 -32.066 23.131 1.00 42.46 C
ATOM 7 C4' G A 36 -8.973 -33.309 23.977 1.00 44.35 C
ATOM 8 O4' G A 36 -7.982 -34.202 23.403 1.00 43.42 O
ATOM 9 C3' G A 36 -8.492 -33.102 25.403 1.00 42.78 C
ATOM 10 O3' G A 36 -9.516 -32.657 26.276 1.00 43.67 O
ATOM 11 C2' G A 36 -7.937 -34.472 25.761 1.00 42.23 C
ATOM 12 O2' G A 36 -8.991 -35.376 26.053 1.00 48.19 O
ATOM 13 C1' G A 36 -7.303 -34.889 24.434 1.00 38.89 C
ATOM 14 N9 G A 36 -5.871 -34.535 24.372 1.00 37.48 N
ATOM 15 C8 G A 36 -5.258 -33.698 23.470 1.00 34.61 C
ATOM 16 N7 G A 36 -3.973 -33.584 23.670 1.00 33.80 N
ATOM 17 C5 G A 36 -3.718 -34.394 24.770 1.00 35.35 C
ATOM 18 C6 G A 36 -2.502 -34.671 25.453 1.00 32.66 C
ATOM 19 O6 G A 36 -1.367 -34.243 25.214 1.00 27.80 O
ATOM 20 N1 G A 36 -2.695 -35.543 26.519 1.00 32.17 N
ATOM 21 C2 G A 36 -3.902 -36.086 26.881 1.00 34.28 C
ATOM 22 N2 G A 36 -3.885 -36.911 27.938 1.00 33.89 N
ATOM 23 N3 G A 36 -5.043 -35.838 26.254 1.00 33.99 N
ATOM 24 C4 G A 36 -4.879 -34.990 25.214 1.00 36.82 C
ATOM 25 P G A 37 -9.145 -31.792 27.579 1.00 48.85 P
ATOM 26 OP1 G A 37 -10.421 -31.306 28.157 1.00 52.02 O
ATOM 27 OP2 G A 37 -8.122 -30.797 27.172 1.00 39.61 O
ATOM 28 O5' G A 37 -8.490 -32.872 28.546 1.00 47.28 O
TER
ATOM 1 O3' A B 4 -2.014 -31.084 13.368 1.00 39.64 O
ATOM 2 P G B 5 -1.830 -29.511 13.642 1.00 35.81 P
ATOM 3 OP1 G B 5 -2.574 -28.793 12.580 1.00 35.12 O
ATOM 4 OP2 G B 5 -0.375 -29.259 13.790 1.00 34.58 O
ATOM 5 O5' G B 5 -2.560 -29.311 15.040 1.00 39.38 O
ATOM 6 C5' G B 5 -3.966 -29.473 15.156 1.00 36.01 C
ATOM 7 C4' G B 5 -4.372 -29.720 16.583 1.00 34.02 C
ATOM 8 O4' G B 5 -3.679 -30.891 17.088 1.00 34.43 O
ATOM 9 C3' G B 5 -4.016 -28.622 17.577 1.00 36.35 C
ATOM 10 O3' G B 5 -4.946 -27.551 17.575 1.00 35.83 O
ATOM 11 C2' G B 5 -3.958 -29.378 18.896 1.00 36.38 C
ATOM 12 O2' G B 5 -5.267 -29.619 19.393 1.00 35.12 O
ATOM 13 C1' G B 5 -3.360 -30.714 18.451 1.00 37.01 C
ATOM 14 N9 G B 5 -1.890 -30.746 18.598 1.00 35.02 N
ATOM 15 C8 G B 5 -0.953 -30.284 17.707 1.00 35.36 C
ATOM 16 N7 G B 5 0.276 -30.457 18.117 1.00 36.08 N
ATOM 17 C5 G B 5 0.147 -31.077 19.354 1.00 37.83 C
ATOM 18 C6 G B 5 1.137 -31.516 20.277 1.00 37.69 C
ATOM 19 O6 G B 5 2.370 -31.444 20.187 1.00 39.48 O
ATOM 20 N1 G B 5 0.562 -32.090 21.405 1.00 33.47 N
ATOM 21 C2 G B 5 -0.787 -32.231 21.617 1.00 36.36 C
ATOM 22 N2 G B 5 -1.147 -32.814 22.771 1.00 35.27 N
ATOM 23 N3 G B 5 -1.716 -31.829 20.765 1.00 35.62 N
ATOM 24 C4 G B 5 -1.184 -31.263 19.662 1.00 36.69 C
ATOM 25 P U B 6 -4.438 -26.031 17.718 1.00 38.35 P
ATOM 26 OP1 U B 6 -5.431 -25.173 17.024 1.00 38.42 O
ATOM 27 OP2 U B 6 -3.025 -25.996 17.265 1.00 38.11 O
ATOM 28 O5' U B 6 -4.508 -25.778 19.288 1.00 36.34 O
TER
Atoms:
OP1: (-8.379,-29.966,21.028)
OP2: (-8.351,-28.881,23.338)
C3': (-8.492,-33.102,25.403)
C1': (-7.303,-34.889,24.434)
C5': (-9.099,-32.066,23.131)
O6: (-1.367,-34.243,25.214)
O4': (-7.982,-34.202,23.403)
C8: (-5.258,-33.698,23.470)
C2: (-3.902,-36.086,26.881)
C6: (-2.502,-34.671,25.453)
C5: (-3.718,-34.394,24.770)
C4: (-4.879,-34.990,25.214)
P: (-7.820,-29.901,22.400)
C4': (-8.973,-33.309,23.977)
C2': (-7.937,-34.472,25.761)
O2': (-8.991,-35.376,26.053)
N1: (-2.695,-35.543,26.519)
N2: (-3.885,-36.911,27.938)
N3: (-5.043,-35.838,26.254)
N7: (-3.973,-33.584,23.670)
N9: (-5.871,-34.535,24.372)
O5': (-7.880,-31.340,23.078)
O3': (-9.516,-32.657,26.276)
OP2: (-8.351,-28.881,23.338)
C3': (-8.492,-33.102,25.403)
C1': (-7.303,-34.889,24.434)
C5': (-9.099,-32.066,23.131)
O6: (-1.367,-34.243,25.214)
O4': (-7.982,-34.202,23.403)
C8: (-5.258,-33.698,23.470)
C2: (-3.902,-36.086,26.881)
C6: (-2.502,-34.671,25.453)
C5: (-3.718,-34.394,24.770)
C4: (-4.879,-34.990,25.214)
P: (-7.820,-29.901,22.400)
C4': (-8.973,-33.309,23.977)
C2': (-7.937,-34.472,25.761)
O2': (-8.991,-35.376,26.053)
N1: (-2.695,-35.543,26.519)
N2: (-3.885,-36.911,27.938)
N3: (-5.043,-35.838,26.254)
N7: (-3.973,-33.584,23.670)
N9: (-5.871,-34.535,24.372)
O5': (-7.880,-31.340,23.078)
O3': (-9.516,-32.657,26.276)
OP1: (-2.574,-28.793,12.580)
OP2: (-0.375,-29.259,13.790)
C3': (-4.016,-28.622,17.577)
C1': (-3.360,-30.714,18.451)
C5': (-3.966,-29.473,15.156)
O6: (2.370,-31.444,20.187)
O4': (-3.679,-30.891,17.088)
C8: (-0.953,-30.284,17.707)
C2: (-0.787,-32.231,21.617)
C6: (1.137,-31.516,20.277)
C5: (0.147,-31.077,19.354)
C4: (-1.184,-31.263,19.662)
P: (-1.830,-29.511,13.642)
C4': (-4.372,-29.720,16.583)
C2': (-3.958,-29.378,18.896)
O2': (-5.267,-29.619,19.393)
N1: (0.562,-32.090,21.405)
N2: (-1.147,-32.814,22.771)
N3: (-1.716,-31.829,20.765)
N7: (0.276,-30.457,18.117)
N9: (-1.890,-30.746,18.598)
O5': (-2.560,-29.311,15.040)
O3': (-4.946,-27.551,17.575)
OP2: (-0.375,-29.259,13.790)
C3': (-4.016,-28.622,17.577)
C1': (-3.360,-30.714,18.451)
C5': (-3.966,-29.473,15.156)
O6: (2.370,-31.444,20.187)
O4': (-3.679,-30.891,17.088)
C8: (-0.953,-30.284,17.707)
C2: (-0.787,-32.231,21.617)
C6: (1.137,-31.516,20.277)
C5: (0.147,-31.077,19.354)
C4: (-1.184,-31.263,19.662)
P: (-1.830,-29.511,13.642)
C4': (-4.372,-29.720,16.583)
C2': (-3.958,-29.378,18.896)
O2': (-5.267,-29.619,19.393)
N1: (0.562,-32.090,21.405)
N2: (-1.147,-32.814,22.771)
N3: (-1.716,-31.829,20.765)
N7: (0.276,-30.457,18.117)
N9: (-1.890,-30.746,18.598)
O5': (-2.560,-29.311,15.040)
O3': (-4.946,-27.551,17.575)
Image (generated by PyMOL):