Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0234:0235
Extra
PDB:
ATOM 1 O3' C A 233 92.815 111.917 -9.533 1.00 64.50 O
ATOM 2 P G A 234 94.294 112.541 -9.564 1.00 66.50 P
ATOM 3 OP1 G A 234 94.614 112.929 -10.971 1.00 67.62 O
ATOM 4 OP2 G A 234 95.193 111.594 -8.838 1.00 62.69 O
ATOM 5 O5' G A 234 94.118 113.871 -8.715 1.00 63.72 O
ATOM 6 C5' G A 234 92.954 114.695 -8.899 1.00 64.64 C
ATOM 7 C4' G A 234 93.014 115.882 -7.980 1.00 66.67 C
ATOM 8 O4' G A 234 92.817 115.433 -6.609 1.00 68.14 O
ATOM 9 C3' G A 234 94.353 116.608 -8.009 1.00 66.88 C
ATOM 10 O3' G A 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 11 C2' G A 234 95.090 115.997 -6.823 1.00 67.00 C
ATOM 12 O2' G A 234 96.098 116.829 -6.288 1.00 65.88 O
ATOM 13 C1' G A 234 93.947 115.771 -5.833 1.00 68.08 C
ATOM 14 N9 G A 234 94.217 114.680 -4.898 1.00 69.29 N
ATOM 15 C8 G A 234 94.810 113.470 -5.183 1.00 69.61 C
ATOM 16 N7 G A 234 95.015 112.737 -4.123 1.00 70.96 N
ATOM 17 C5 G A 234 94.510 113.497 -3.074 1.00 71.24 C
ATOM 18 C6 G A 234 94.481 113.236 -1.676 1.00 70.76 C
ATOM 19 O6 G A 234 94.933 112.262 -1.065 1.00 69.70 O
ATOM 20 N1 G A 234 93.859 114.265 -0.977 1.00 70.79 N
ATOM 21 C2 G A 234 93.339 115.403 -1.542 1.00 70.60 C
ATOM 22 N2 G A 234 92.756 116.268 -0.696 1.00 70.40 N
ATOM 23 N3 G A 234 93.382 115.672 -2.838 1.00 70.42 N
ATOM 24 C4 G A 234 93.979 114.683 -3.540 1.00 70.11 C
ATOM 25 P A A 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 26 OP1 A A 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 27 OP2 A A 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 28 O5' A A 235 93.948 120.356 -8.707 1.00 62.29 O
TER
ATOM 1 O3' G B 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 2 P A B 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 3 OP1 A B 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 4 OP2 A B 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 5 O5' A B 235 93.948 120.356 -8.707 1.00 62.29 O
ATOM 6 C5' A B 235 92.543 120.452 -9.022 1.00 62.82 C
ATOM 7 C4' A B 235 91.928 121.612 -8.273 1.00 63.81 C
ATOM 8 O4' A B 235 91.828 121.282 -6.856 1.00 63.20 O
ATOM 9 C3' A B 235 92.739 122.903 -8.343 1.00 63.34 C
ATOM 10 O3' A B 235 91.861 124.014 -8.229 1.00 64.91 O
ATOM 11 C2' A B 235 93.584 122.809 -7.080 1.00 62.75 C
ATOM 12 O2' A B 235 94.090 124.045 -6.628 1.00 60.92 O
ATOM 13 C1' A B 235 92.563 122.226 -6.104 1.00 63.15 C
ATOM 14 N9 A B 235 93.141 121.557 -4.940 1.00 63.22 N
ATOM 15 C8 A B 235 93.891 120.404 -4.894 1.00 63.24 C
ATOM 16 N7 A B 235 94.279 120.077 -3.686 1.00 62.65 N
ATOM 17 C5 A B 235 93.744 121.075 -2.882 1.00 61.15 C
ATOM 18 C6 A B 235 93.797 121.303 -1.500 1.00 59.05 C
ATOM 19 N6 A B 235 94.446 120.514 -0.645 1.00 57.71 N
ATOM 20 N1 A B 235 93.156 122.386 -1.019 1.00 59.11 N
ATOM 21 C2 A B 235 92.512 123.183 -1.876 1.00 60.78 C
ATOM 22 N3 A B 235 92.391 123.077 -3.193 1.00 61.93 N
ATOM 23 C4 A B 235 93.038 121.989 -3.640 1.00 61.74 C
ATOM 24 P A B 236 91.372 124.784 -9.546 1.00 67.08 P
ATOM 25 OP1 A B 236 92.432 124.634 -10.579 1.00 66.75 O
ATOM 26 OP2 A B 236 90.933 126.143 -9.124 1.00 65.96 O
ATOM 27 O5' A B 236 90.078 123.979 -10.021 1.00 64.75 O
TER
ATOM 2 P G A 234 94.294 112.541 -9.564 1.00 66.50 P
ATOM 3 OP1 G A 234 94.614 112.929 -10.971 1.00 67.62 O
ATOM 4 OP2 G A 234 95.193 111.594 -8.838 1.00 62.69 O
ATOM 5 O5' G A 234 94.118 113.871 -8.715 1.00 63.72 O
ATOM 6 C5' G A 234 92.954 114.695 -8.899 1.00 64.64 C
ATOM 7 C4' G A 234 93.014 115.882 -7.980 1.00 66.67 C
ATOM 8 O4' G A 234 92.817 115.433 -6.609 1.00 68.14 O
ATOM 9 C3' G A 234 94.353 116.608 -8.009 1.00 66.88 C
ATOM 10 O3' G A 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 11 C2' G A 234 95.090 115.997 -6.823 1.00 67.00 C
ATOM 12 O2' G A 234 96.098 116.829 -6.288 1.00 65.88 O
ATOM 13 C1' G A 234 93.947 115.771 -5.833 1.00 68.08 C
ATOM 14 N9 G A 234 94.217 114.680 -4.898 1.00 69.29 N
ATOM 15 C8 G A 234 94.810 113.470 -5.183 1.00 69.61 C
ATOM 16 N7 G A 234 95.015 112.737 -4.123 1.00 70.96 N
ATOM 17 C5 G A 234 94.510 113.497 -3.074 1.00 71.24 C
ATOM 18 C6 G A 234 94.481 113.236 -1.676 1.00 70.76 C
ATOM 19 O6 G A 234 94.933 112.262 -1.065 1.00 69.70 O
ATOM 20 N1 G A 234 93.859 114.265 -0.977 1.00 70.79 N
ATOM 21 C2 G A 234 93.339 115.403 -1.542 1.00 70.60 C
ATOM 22 N2 G A 234 92.756 116.268 -0.696 1.00 70.40 N
ATOM 23 N3 G A 234 93.382 115.672 -2.838 1.00 70.42 N
ATOM 24 C4 G A 234 93.979 114.683 -3.540 1.00 70.11 C
ATOM 25 P A A 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 26 OP1 A A 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 27 OP2 A A 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 28 O5' A A 235 93.948 120.356 -8.707 1.00 62.29 O
TER
ATOM 1 O3' G B 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 2 P A B 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 3 OP1 A B 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 4 OP2 A B 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 5 O5' A B 235 93.948 120.356 -8.707 1.00 62.29 O
ATOM 6 C5' A B 235 92.543 120.452 -9.022 1.00 62.82 C
ATOM 7 C4' A B 235 91.928 121.612 -8.273 1.00 63.81 C
ATOM 8 O4' A B 235 91.828 121.282 -6.856 1.00 63.20 O
ATOM 9 C3' A B 235 92.739 122.903 -8.343 1.00 63.34 C
ATOM 10 O3' A B 235 91.861 124.014 -8.229 1.00 64.91 O
ATOM 11 C2' A B 235 93.584 122.809 -7.080 1.00 62.75 C
ATOM 12 O2' A B 235 94.090 124.045 -6.628 1.00 60.92 O
ATOM 13 C1' A B 235 92.563 122.226 -6.104 1.00 63.15 C
ATOM 14 N9 A B 235 93.141 121.557 -4.940 1.00 63.22 N
ATOM 15 C8 A B 235 93.891 120.404 -4.894 1.00 63.24 C
ATOM 16 N7 A B 235 94.279 120.077 -3.686 1.00 62.65 N
ATOM 17 C5 A B 235 93.744 121.075 -2.882 1.00 61.15 C
ATOM 18 C6 A B 235 93.797 121.303 -1.500 1.00 59.05 C
ATOM 19 N6 A B 235 94.446 120.514 -0.645 1.00 57.71 N
ATOM 20 N1 A B 235 93.156 122.386 -1.019 1.00 59.11 N
ATOM 21 C2 A B 235 92.512 123.183 -1.876 1.00 60.78 C
ATOM 22 N3 A B 235 92.391 123.077 -3.193 1.00 61.93 N
ATOM 23 C4 A B 235 93.038 121.989 -3.640 1.00 61.74 C
ATOM 24 P A B 236 91.372 124.784 -9.546 1.00 67.08 P
ATOM 25 OP1 A B 236 92.432 124.634 -10.579 1.00 66.75 O
ATOM 26 OP2 A B 236 90.933 126.143 -9.124 1.00 65.96 O
ATOM 27 O5' A B 236 90.078 123.979 -10.021 1.00 64.75 O
TER
Atoms:
OP1: (94.614,112.929,-10.971)
OP2: (95.193,111.594,-8.838)
C3': (94.353,116.608,-8.009)
C1': (93.947,115.771,-5.833)
C5': (92.954,114.695,-8.899)
O6: (94.933,112.262,-1.065)
O4': (92.817,115.433,-6.609)
C8: (94.810,113.470,-5.183)
C2: (93.339,115.403,-1.542)
C6: (94.481,113.236,-1.676)
C5: (94.510,113.497,-3.074)
C4: (93.979,114.683,-3.540)
P: (94.294,112.541,-9.564)
C4': (93.014,115.882,-7.980)
C2': (95.090,115.997,-6.823)
O2': (96.098,116.829,-6.288)
N1: (93.859,114.265,-0.977)
N2: (92.756,116.268,-0.696)
N3: (93.382,115.672,-2.838)
N7: (95.015,112.737,-4.123)
N9: (94.217,114.680,-4.898)
O5': (94.118,113.871,-8.715)
O3': (94.162,118.005,-7.854)
OP2: (95.193,111.594,-8.838)
C3': (94.353,116.608,-8.009)
C1': (93.947,115.771,-5.833)
C5': (92.954,114.695,-8.899)
O6: (94.933,112.262,-1.065)
O4': (92.817,115.433,-6.609)
C8: (94.810,113.470,-5.183)
C2: (93.339,115.403,-1.542)
C6: (94.481,113.236,-1.676)
C5: (94.510,113.497,-3.074)
C4: (93.979,114.683,-3.540)
P: (94.294,112.541,-9.564)
C4': (93.014,115.882,-7.980)
C2': (95.090,115.997,-6.823)
O2': (96.098,116.829,-6.288)
N1: (93.859,114.265,-0.977)
N2: (92.756,116.268,-0.696)
N3: (93.382,115.672,-2.838)
N7: (95.015,112.737,-4.123)
N9: (94.217,114.680,-4.898)
O5': (94.118,113.871,-8.715)
O3': (94.162,118.005,-7.854)
OP1: (94.353,118.484,-10.293)
OP2: (96.196,119.209,-8.652)
C3': (92.739,122.903,-8.343)
C1': (92.563,122.226,-6.104)
C5': (92.543,120.452,-9.022)
O4': (91.828,121.282,-6.856)
C8: (93.891,120.404,-4.894)
O2': (94.090,124.045,-6.628)
C6: (93.797,121.303,-1.500)
C5: (93.744,121.075,-2.882)
C4: (93.038,121.989,-3.640)
P: (94.751,119.007,-8.961)
C4': (91.928,121.612,-8.273)
C2': (93.584,122.809,-7.080)
C2: (92.512,123.183,-1.876)
N1: (93.156,122.386,-1.019)
N3: (92.391,123.077,-3.193)
N6: (94.446,120.514,-0.645)
N7: (94.279,120.077,-3.686)
N9: (93.141,121.557,-4.940)
O5': (93.948,120.356,-8.707)
O3': (91.861,124.014,-8.229)
OP2: (96.196,119.209,-8.652)
C3': (92.739,122.903,-8.343)
C1': (92.563,122.226,-6.104)
C5': (92.543,120.452,-9.022)
O4': (91.828,121.282,-6.856)
C8: (93.891,120.404,-4.894)
O2': (94.090,124.045,-6.628)
C6: (93.797,121.303,-1.500)
C5: (93.744,121.075,-2.882)
C4: (93.038,121.989,-3.640)
P: (94.751,119.007,-8.961)
C4': (91.928,121.612,-8.273)
C2': (93.584,122.809,-7.080)
C2: (92.512,123.183,-1.876)
N1: (93.156,122.386,-1.019)
N3: (92.391,123.077,-3.193)
N6: (94.446,120.514,-0.645)
N7: (94.279,120.077,-3.686)
N9: (93.141,121.557,-4.940)
O5': (93.948,120.356,-8.707)
O3': (91.861,124.014,-8.229)
Image (generated by PyMOL):