Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0234:0235
Extra
PDB:
ATOM 1 O3' C A 233 92.394 111.985 -9.665 1.00 50.48 O
ATOM 2 P G A 234 93.884 112.575 -9.678 1.00 52.94 P
ATOM 3 OP1 G A 234 94.205 113.031 -11.066 1.00 53.20 O
ATOM 4 OP2 G A 234 94.753 111.560 -9.011 1.00 48.86 O
ATOM 5 O5' G A 234 93.752 113.856 -8.747 1.00 50.43 O
ATOM 6 C5' G A 234 92.602 114.712 -8.856 1.00 51.03 C
ATOM 7 C4' G A 234 92.736 115.881 -7.922 1.00 52.12 C
ATOM 8 O4' G A 234 92.573 115.416 -6.553 1.00 54.07 O
ATOM 9 C3' G A 234 94.085 116.586 -7.983 1.00 52.33 C
ATOM 10 O3' G A 234 93.913 117.988 -7.831 1.00 51.81 O
ATOM 11 C2' G A 234 94.845 115.964 -6.814 1.00 52.26 C
ATOM 12 O2' G A 234 95.855 116.801 -6.287 1.00 51.55 O
ATOM 13 C1' G A 234 93.725 115.734 -5.800 1.00 52.42 C
ATOM 14 N9 G A 234 93.993 114.630 -4.882 1.00 51.97 N
ATOM 15 C8 G A 234 94.552 113.410 -5.188 1.00 51.94 C
ATOM 16 N7 G A 234 94.723 112.647 -4.143 1.00 53.13 N
ATOM 17 C5 G A 234 94.237 113.402 -3.082 1.00 53.83 C
ATOM 18 C6 G A 234 94.172 113.105 -1.694 1.00 53.28 C
ATOM 19 O6 G A 234 94.555 112.093 -1.105 1.00 53.98 O
ATOM 20 N1 G A 234 93.593 114.142 -0.976 1.00 53.46 N
ATOM 21 C2 G A 234 93.135 115.317 -1.514 1.00 53.55 C
ATOM 22 N2 G A 234 92.592 116.189 -0.646 1.00 53.48 N
ATOM 23 N3 G A 234 93.200 115.616 -2.804 1.00 53.09 N
ATOM 24 C4 G A 234 93.761 114.620 -3.524 1.00 53.02 C
ATOM 25 P A A 235 94.414 118.971 -8.996 1.00 50.74 P
ATOM 26 OP1 A A 235 93.911 118.443 -10.290 1.00 51.37 O
ATOM 27 OP2 A A 235 95.872 119.191 -8.808 1.00 49.45 O
ATOM 28 O5' A A 235 93.648 120.329 -8.704 1.00 48.22 O
TER
ATOM 1 O3' G B 234 93.913 117.988 -7.831 1.00 51.81 O
ATOM 2 P A B 235 94.414 118.971 -8.996 1.00 50.74 P
ATOM 3 OP1 A B 235 93.911 118.443 -10.290 1.00 51.37 O
ATOM 4 OP2 A B 235 95.872 119.191 -8.808 1.00 49.45 O
ATOM 5 O5' A B 235 93.648 120.329 -8.704 1.00 48.22 O
ATOM 6 C5' A B 235 92.266 120.476 -9.052 1.00 49.10 C
ATOM 7 C4' A B 235 91.675 121.633 -8.296 1.00 50.39 C
ATOM 8 O4' A B 235 91.597 121.294 -6.882 1.00 51.16 O
ATOM 9 C3' A B 235 92.501 122.911 -8.374 1.00 49.37 C
ATOM 10 O3' A B 235 91.625 124.012 -8.244 1.00 49.19 O
ATOM 11 C2' A B 235 93.364 122.815 -7.125 1.00 49.75 C
ATOM 12 O2' A B 235 93.849 124.066 -6.682 1.00 47.89 O
ATOM 13 C1' A B 235 92.362 122.221 -6.136 1.00 50.25 C
ATOM 14 N9 A B 235 92.960 121.526 -4.998 1.00 49.04 N
ATOM 15 C8 A B 235 93.730 120.391 -4.994 1.00 48.54 C
ATOM 16 N7 A B 235 94.134 120.034 -3.802 1.00 48.99 N
ATOM 17 C5 A B 235 93.588 120.994 -2.963 1.00 49.30 C
ATOM 18 C6 A B 235 93.657 121.184 -1.578 1.00 49.32 C
ATOM 19 N6 A B 235 94.334 120.383 -0.756 1.00 49.44 N
ATOM 20 N1 A B 235 93.001 122.243 -1.056 1.00 49.56 N
ATOM 21 C2 A B 235 92.326 123.049 -1.881 1.00 49.19 C
ATOM 22 N3 A B 235 92.189 122.976 -3.199 1.00 49.32 N
ATOM 23 C4 A B 235 92.855 121.914 -3.686 1.00 49.42 C
ATOM 24 P A B 236 91.094 124.753 -9.553 1.00 50.17 P
ATOM 25 OP1 A B 236 92.133 124.594 -10.607 1.00 49.65 O
ATOM 26 OP2 A B 236 90.648 126.112 -9.144 1.00 50.21 O
ATOM 27 O5' A B 236 89.813 123.917 -9.987 1.00 48.66 O
TER
ATOM 2 P G A 234 93.884 112.575 -9.678 1.00 52.94 P
ATOM 3 OP1 G A 234 94.205 113.031 -11.066 1.00 53.20 O
ATOM 4 OP2 G A 234 94.753 111.560 -9.011 1.00 48.86 O
ATOM 5 O5' G A 234 93.752 113.856 -8.747 1.00 50.43 O
ATOM 6 C5' G A 234 92.602 114.712 -8.856 1.00 51.03 C
ATOM 7 C4' G A 234 92.736 115.881 -7.922 1.00 52.12 C
ATOM 8 O4' G A 234 92.573 115.416 -6.553 1.00 54.07 O
ATOM 9 C3' G A 234 94.085 116.586 -7.983 1.00 52.33 C
ATOM 10 O3' G A 234 93.913 117.988 -7.831 1.00 51.81 O
ATOM 11 C2' G A 234 94.845 115.964 -6.814 1.00 52.26 C
ATOM 12 O2' G A 234 95.855 116.801 -6.287 1.00 51.55 O
ATOM 13 C1' G A 234 93.725 115.734 -5.800 1.00 52.42 C
ATOM 14 N9 G A 234 93.993 114.630 -4.882 1.00 51.97 N
ATOM 15 C8 G A 234 94.552 113.410 -5.188 1.00 51.94 C
ATOM 16 N7 G A 234 94.723 112.647 -4.143 1.00 53.13 N
ATOM 17 C5 G A 234 94.237 113.402 -3.082 1.00 53.83 C
ATOM 18 C6 G A 234 94.172 113.105 -1.694 1.00 53.28 C
ATOM 19 O6 G A 234 94.555 112.093 -1.105 1.00 53.98 O
ATOM 20 N1 G A 234 93.593 114.142 -0.976 1.00 53.46 N
ATOM 21 C2 G A 234 93.135 115.317 -1.514 1.00 53.55 C
ATOM 22 N2 G A 234 92.592 116.189 -0.646 1.00 53.48 N
ATOM 23 N3 G A 234 93.200 115.616 -2.804 1.00 53.09 N
ATOM 24 C4 G A 234 93.761 114.620 -3.524 1.00 53.02 C
ATOM 25 P A A 235 94.414 118.971 -8.996 1.00 50.74 P
ATOM 26 OP1 A A 235 93.911 118.443 -10.290 1.00 51.37 O
ATOM 27 OP2 A A 235 95.872 119.191 -8.808 1.00 49.45 O
ATOM 28 O5' A A 235 93.648 120.329 -8.704 1.00 48.22 O
TER
ATOM 1 O3' G B 234 93.913 117.988 -7.831 1.00 51.81 O
ATOM 2 P A B 235 94.414 118.971 -8.996 1.00 50.74 P
ATOM 3 OP1 A B 235 93.911 118.443 -10.290 1.00 51.37 O
ATOM 4 OP2 A B 235 95.872 119.191 -8.808 1.00 49.45 O
ATOM 5 O5' A B 235 93.648 120.329 -8.704 1.00 48.22 O
ATOM 6 C5' A B 235 92.266 120.476 -9.052 1.00 49.10 C
ATOM 7 C4' A B 235 91.675 121.633 -8.296 1.00 50.39 C
ATOM 8 O4' A B 235 91.597 121.294 -6.882 1.00 51.16 O
ATOM 9 C3' A B 235 92.501 122.911 -8.374 1.00 49.37 C
ATOM 10 O3' A B 235 91.625 124.012 -8.244 1.00 49.19 O
ATOM 11 C2' A B 235 93.364 122.815 -7.125 1.00 49.75 C
ATOM 12 O2' A B 235 93.849 124.066 -6.682 1.00 47.89 O
ATOM 13 C1' A B 235 92.362 122.221 -6.136 1.00 50.25 C
ATOM 14 N9 A B 235 92.960 121.526 -4.998 1.00 49.04 N
ATOM 15 C8 A B 235 93.730 120.391 -4.994 1.00 48.54 C
ATOM 16 N7 A B 235 94.134 120.034 -3.802 1.00 48.99 N
ATOM 17 C5 A B 235 93.588 120.994 -2.963 1.00 49.30 C
ATOM 18 C6 A B 235 93.657 121.184 -1.578 1.00 49.32 C
ATOM 19 N6 A B 235 94.334 120.383 -0.756 1.00 49.44 N
ATOM 20 N1 A B 235 93.001 122.243 -1.056 1.00 49.56 N
ATOM 21 C2 A B 235 92.326 123.049 -1.881 1.00 49.19 C
ATOM 22 N3 A B 235 92.189 122.976 -3.199 1.00 49.32 N
ATOM 23 C4 A B 235 92.855 121.914 -3.686 1.00 49.42 C
ATOM 24 P A B 236 91.094 124.753 -9.553 1.00 50.17 P
ATOM 25 OP1 A B 236 92.133 124.594 -10.607 1.00 49.65 O
ATOM 26 OP2 A B 236 90.648 126.112 -9.144 1.00 50.21 O
ATOM 27 O5' A B 236 89.813 123.917 -9.987 1.00 48.66 O
TER
Atoms:
OP1: (94.205,113.031,-11.066)
OP2: (94.753,111.560,-9.011)
C3': (94.085,116.586,-7.983)
C1': (93.725,115.734,-5.800)
C5': (92.602,114.712,-8.856)
O6: (94.555,112.093,-1.105)
O4': (92.573,115.416,-6.553)
C8: (94.552,113.410,-5.188)
C2: (93.135,115.317,-1.514)
C6: (94.172,113.105,-1.694)
C5: (94.237,113.402,-3.082)
C4: (93.761,114.620,-3.524)
P: (93.884,112.575,-9.678)
C4': (92.736,115.881,-7.922)
C2': (94.845,115.964,-6.814)
O2': (95.855,116.801,-6.287)
N1: (93.593,114.142,-0.976)
N2: (92.592,116.189,-0.646)
N3: (93.200,115.616,-2.804)
N7: (94.723,112.647,-4.143)
N9: (93.993,114.630,-4.882)
O5': (93.752,113.856,-8.747)
O3': (93.913,117.988,-7.831)
OP2: (94.753,111.560,-9.011)
C3': (94.085,116.586,-7.983)
C1': (93.725,115.734,-5.800)
C5': (92.602,114.712,-8.856)
O6: (94.555,112.093,-1.105)
O4': (92.573,115.416,-6.553)
C8: (94.552,113.410,-5.188)
C2: (93.135,115.317,-1.514)
C6: (94.172,113.105,-1.694)
C5: (94.237,113.402,-3.082)
C4: (93.761,114.620,-3.524)
P: (93.884,112.575,-9.678)
C4': (92.736,115.881,-7.922)
C2': (94.845,115.964,-6.814)
O2': (95.855,116.801,-6.287)
N1: (93.593,114.142,-0.976)
N2: (92.592,116.189,-0.646)
N3: (93.200,115.616,-2.804)
N7: (94.723,112.647,-4.143)
N9: (93.993,114.630,-4.882)
O5': (93.752,113.856,-8.747)
O3': (93.913,117.988,-7.831)
OP1: (93.911,118.443,-10.290)
OP2: (95.872,119.191,-8.808)
C3': (92.501,122.911,-8.374)
C1': (92.362,122.221,-6.136)
C5': (92.266,120.476,-9.052)
O4': (91.597,121.294,-6.882)
C8: (93.730,120.391,-4.994)
O2': (93.849,124.066,-6.682)
C6: (93.657,121.184,-1.578)
C5: (93.588,120.994,-2.963)
C4: (92.855,121.914,-3.686)
P: (94.414,118.971,-8.996)
C4': (91.675,121.633,-8.296)
C2': (93.364,122.815,-7.125)
C2: (92.326,123.049,-1.881)
N1: (93.001,122.243,-1.056)
N3: (92.189,122.976,-3.199)
N6: (94.334,120.383,-0.756)
N7: (94.134,120.034,-3.802)
N9: (92.960,121.526,-4.998)
O5': (93.648,120.329,-8.704)
O3': (91.625,124.012,-8.244)
OP2: (95.872,119.191,-8.808)
C3': (92.501,122.911,-8.374)
C1': (92.362,122.221,-6.136)
C5': (92.266,120.476,-9.052)
O4': (91.597,121.294,-6.882)
C8: (93.730,120.391,-4.994)
O2': (93.849,124.066,-6.682)
C6: (93.657,121.184,-1.578)
C5: (93.588,120.994,-2.963)
C4: (92.855,121.914,-3.686)
P: (94.414,118.971,-8.996)
C4': (91.675,121.633,-8.296)
C2': (93.364,122.815,-7.125)
C2: (92.326,123.049,-1.881)
N1: (93.001,122.243,-1.056)
N3: (92.189,122.976,-3.199)
N6: (94.334,120.383,-0.756)
N7: (94.134,120.034,-3.802)
N9: (92.960,121.526,-4.998)
O5': (93.648,120.329,-8.704)
O3': (91.625,124.012,-8.244)
Image (generated by PyMOL):