Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0345:0282
Extra
PDB:
ATOM 1 O3' C A 344 53.298 120.458 15.349 1.00 62.98 O
ATOM 2 P A A 345 54.278 120.053 14.137 1.00 65.04 P
ATOM 3 OP1 A A 345 53.445 119.611 12.988 1.00 65.00 O
ATOM 4 OP2 A A 345 55.336 119.151 14.667 1.00 63.60 O
ATOM 5 O5' A A 345 54.963 121.423 13.723 1.00 65.21 O
ATOM 6 C5' A A 345 56.094 121.443 12.847 1.00 66.95 C
ATOM 7 C4' A A 345 56.152 122.759 12.123 1.00 68.48 C
ATOM 8 O4' A A 345 55.102 122.801 11.116 1.00 69.26 O
ATOM 9 C3' A A 345 55.945 123.981 13.011 1.00 69.20 C
ATOM 10 O3' A A 345 56.770 125.039 12.542 1.00 71.26 O
ATOM 11 C2' A A 345 54.460 124.287 12.808 1.00 69.25 C
ATOM 12 O2' A A 345 54.108 125.636 13.050 1.00 68.17 O
ATOM 13 C1' A A 345 54.281 123.930 11.335 1.00 68.90 C
ATOM 14 N9 A A 345 52.909 123.596 10.947 1.00 68.98 N
ATOM 15 C8 A A 345 52.159 122.499 11.302 1.00 68.94 C
ATOM 16 N7 A A 345 50.949 122.497 10.793 1.00 69.13 N
ATOM 17 C5 A A 345 50.894 123.670 10.051 1.00 69.24 C
ATOM 18 C6 A A 345 49.874 124.258 9.270 1.00 68.64 C
ATOM 19 N6 A A 345 48.663 123.722 9.103 1.00 67.52 N
ATOM 20 N1 A A 345 50.147 125.433 8.659 1.00 68.56 N
ATOM 21 C2 A A 345 51.362 125.976 8.826 1.00 68.93 C
ATOM 22 N3 A A 345 52.400 125.525 9.533 1.00 69.34 N
ATOM 23 C4 A A 345 52.098 124.355 10.131 1.00 69.95 C
ATOM 24 P G A 346 58.149 125.366 13.300 1.00 72.05 P
ATOM 25 OP1 G A 346 58.479 124.202 14.156 1.00 72.51 O
ATOM 26 OP2 G A 346 58.023 126.714 13.907 1.00 72.10 O
ATOM 27 O5' G A 346 59.237 125.413 12.133 1.00 73.72 O
TER
ATOM 1 O3' A B 281 46.469 126.348 5.700 1.00 75.22 O
ATOM 2 P C B 282 45.488 126.119 6.949 1.00 76.33 P
ATOM 3 OP1 C B 282 44.613 127.316 7.057 1.00 76.08 O
ATOM 4 OP2 C B 282 46.307 125.695 8.115 1.00 76.01 O
ATOM 5 O5' C B 282 44.583 124.887 6.503 1.00 77.81 O
ATOM 6 C5' C B 282 43.747 124.972 5.336 1.00 79.59 C
ATOM 7 C4' C B 282 43.008 123.677 5.135 1.00 80.81 C
ATOM 8 O4' C B 282 43.966 122.608 4.929 1.00 81.38 O
ATOM 9 C3' C B 282 42.191 123.213 6.327 1.00 81.71 C
ATOM 10 O3' C B 282 40.919 123.835 6.363 1.00 83.60 O
ATOM 11 C2' C B 282 42.087 121.715 6.087 1.00 81.98 C
ATOM 12 O2' C B 282 41.083 121.381 5.148 1.00 81.59 O
ATOM 13 C1' C B 282 43.475 121.412 5.515 1.00 82.04 C
ATOM 14 N1 C B 282 44.426 120.971 6.549 1.00 82.68 N
ATOM 15 C2 C B 282 44.461 119.612 6.899 1.00 83.10 C
ATOM 16 O2 C B 282 43.722 118.813 6.297 1.00 83.08 O
ATOM 17 N3 C B 282 45.301 119.205 7.880 1.00 82.74 N
ATOM 18 C4 C B 282 46.092 120.090 8.492 1.00 81.99 C
ATOM 19 N4 C B 282 46.895 119.645 9.459 1.00 80.89 N
ATOM 20 C5 C B 282 46.094 121.471 8.140 1.00 82.49 C
ATOM 21 C6 C B 282 45.254 121.865 7.174 1.00 82.50 C
ATOM 22 P C B 283 40.288 124.261 7.774 1.00 85.23 P
ATOM 23 OP1 C B 283 38.892 124.715 7.521 1.00 85.39 O
ATOM 24 OP2 C B 283 41.252 125.179 8.442 1.00 85.15 O
ATOM 25 O5' C B 283 40.237 122.900 8.602 1.00 83.93 O
TER
ATOM 2 P A A 345 54.278 120.053 14.137 1.00 65.04 P
ATOM 3 OP1 A A 345 53.445 119.611 12.988 1.00 65.00 O
ATOM 4 OP2 A A 345 55.336 119.151 14.667 1.00 63.60 O
ATOM 5 O5' A A 345 54.963 121.423 13.723 1.00 65.21 O
ATOM 6 C5' A A 345 56.094 121.443 12.847 1.00 66.95 C
ATOM 7 C4' A A 345 56.152 122.759 12.123 1.00 68.48 C
ATOM 8 O4' A A 345 55.102 122.801 11.116 1.00 69.26 O
ATOM 9 C3' A A 345 55.945 123.981 13.011 1.00 69.20 C
ATOM 10 O3' A A 345 56.770 125.039 12.542 1.00 71.26 O
ATOM 11 C2' A A 345 54.460 124.287 12.808 1.00 69.25 C
ATOM 12 O2' A A 345 54.108 125.636 13.050 1.00 68.17 O
ATOM 13 C1' A A 345 54.281 123.930 11.335 1.00 68.90 C
ATOM 14 N9 A A 345 52.909 123.596 10.947 1.00 68.98 N
ATOM 15 C8 A A 345 52.159 122.499 11.302 1.00 68.94 C
ATOM 16 N7 A A 345 50.949 122.497 10.793 1.00 69.13 N
ATOM 17 C5 A A 345 50.894 123.670 10.051 1.00 69.24 C
ATOM 18 C6 A A 345 49.874 124.258 9.270 1.00 68.64 C
ATOM 19 N6 A A 345 48.663 123.722 9.103 1.00 67.52 N
ATOM 20 N1 A A 345 50.147 125.433 8.659 1.00 68.56 N
ATOM 21 C2 A A 345 51.362 125.976 8.826 1.00 68.93 C
ATOM 22 N3 A A 345 52.400 125.525 9.533 1.00 69.34 N
ATOM 23 C4 A A 345 52.098 124.355 10.131 1.00 69.95 C
ATOM 24 P G A 346 58.149 125.366 13.300 1.00 72.05 P
ATOM 25 OP1 G A 346 58.479 124.202 14.156 1.00 72.51 O
ATOM 26 OP2 G A 346 58.023 126.714 13.907 1.00 72.10 O
ATOM 27 O5' G A 346 59.237 125.413 12.133 1.00 73.72 O
TER
ATOM 1 O3' A B 281 46.469 126.348 5.700 1.00 75.22 O
ATOM 2 P C B 282 45.488 126.119 6.949 1.00 76.33 P
ATOM 3 OP1 C B 282 44.613 127.316 7.057 1.00 76.08 O
ATOM 4 OP2 C B 282 46.307 125.695 8.115 1.00 76.01 O
ATOM 5 O5' C B 282 44.583 124.887 6.503 1.00 77.81 O
ATOM 6 C5' C B 282 43.747 124.972 5.336 1.00 79.59 C
ATOM 7 C4' C B 282 43.008 123.677 5.135 1.00 80.81 C
ATOM 8 O4' C B 282 43.966 122.608 4.929 1.00 81.38 O
ATOM 9 C3' C B 282 42.191 123.213 6.327 1.00 81.71 C
ATOM 10 O3' C B 282 40.919 123.835 6.363 1.00 83.60 O
ATOM 11 C2' C B 282 42.087 121.715 6.087 1.00 81.98 C
ATOM 12 O2' C B 282 41.083 121.381 5.148 1.00 81.59 O
ATOM 13 C1' C B 282 43.475 121.412 5.515 1.00 82.04 C
ATOM 14 N1 C B 282 44.426 120.971 6.549 1.00 82.68 N
ATOM 15 C2 C B 282 44.461 119.612 6.899 1.00 83.10 C
ATOM 16 O2 C B 282 43.722 118.813 6.297 1.00 83.08 O
ATOM 17 N3 C B 282 45.301 119.205 7.880 1.00 82.74 N
ATOM 18 C4 C B 282 46.092 120.090 8.492 1.00 81.99 C
ATOM 19 N4 C B 282 46.895 119.645 9.459 1.00 80.89 N
ATOM 20 C5 C B 282 46.094 121.471 8.140 1.00 82.49 C
ATOM 21 C6 C B 282 45.254 121.865 7.174 1.00 82.50 C
ATOM 22 P C B 283 40.288 124.261 7.774 1.00 85.23 P
ATOM 23 OP1 C B 283 38.892 124.715 7.521 1.00 85.39 O
ATOM 24 OP2 C B 283 41.252 125.179 8.442 1.00 85.15 O
ATOM 25 O5' C B 283 40.237 122.900 8.602 1.00 83.93 O
TER
Atoms:
OP1: (53.445,119.611,12.988)
OP2: (55.336,119.151,14.667)
C3': (55.945,123.981,13.011)
C1': (54.281,123.930,11.335)
C5': (56.094,121.443,12.847)
O4': (55.102,122.801,11.116)
C8: (52.159,122.499,11.302)
O2': (54.108,125.636,13.050)
C6: (49.874,124.258,9.270)
C5: (50.894,123.670,10.051)
C4: (52.098,124.355,10.131)
P: (54.278,120.053,14.137)
C4': (56.152,122.759,12.123)
C2': (54.460,124.287,12.808)
C2: (51.362,125.976,8.826)
N1: (50.147,125.433,8.659)
N3: (52.400,125.525,9.533)
N6: (48.663,123.722,9.103)
N7: (50.949,122.497,10.793)
N9: (52.909,123.596,10.947)
O5': (54.963,121.423,13.723)
O3': (56.770,125.039,12.542)
OP2: (55.336,119.151,14.667)
C3': (55.945,123.981,13.011)
C1': (54.281,123.930,11.335)
C5': (56.094,121.443,12.847)
O4': (55.102,122.801,11.116)
C8: (52.159,122.499,11.302)
O2': (54.108,125.636,13.050)
C6: (49.874,124.258,9.270)
C5: (50.894,123.670,10.051)
C4: (52.098,124.355,10.131)
P: (54.278,120.053,14.137)
C4': (56.152,122.759,12.123)
C2': (54.460,124.287,12.808)
C2: (51.362,125.976,8.826)
N1: (50.147,125.433,8.659)
N3: (52.400,125.525,9.533)
N6: (48.663,123.722,9.103)
N7: (50.949,122.497,10.793)
N9: (52.909,123.596,10.947)
O5': (54.963,121.423,13.723)
O3': (56.770,125.039,12.542)
C2: (44.461,119.612,6.899)
OP1: (44.613,127.316,7.057)
OP2: (46.307,125.695,8.115)
C4: (46.092,120.090,8.492)
O5': (44.583,124.887,6.503)
C3': (42.191,123.213,6.327)
C1': (43.475,121.412,5.515)
O4': (43.966,122.608,4.929)
C5': (43.747,124.972,5.336)
P: (45.488,126.119,6.949)
O2: (43.722,118.813,6.297)
C4': (43.008,123.677,5.135)
C2': (42.087,121.715,6.087)
O2': (41.083,121.381,5.148)
N1: (44.426,120.971,6.549)
N3: (45.301,119.205,7.880)
N4: (46.895,119.645,9.459)
C6: (45.254,121.865,7.174)
C5: (46.094,121.471,8.140)
O3': (40.919,123.835,6.363)
OP1: (44.613,127.316,7.057)
OP2: (46.307,125.695,8.115)
C4: (46.092,120.090,8.492)
O5': (44.583,124.887,6.503)
C3': (42.191,123.213,6.327)
C1': (43.475,121.412,5.515)
O4': (43.966,122.608,4.929)
C5': (43.747,124.972,5.336)
P: (45.488,126.119,6.949)
O2: (43.722,118.813,6.297)
C4': (43.008,123.677,5.135)
C2': (42.087,121.715,6.087)
O2': (41.083,121.381,5.148)
N1: (44.426,120.971,6.549)
N3: (45.301,119.205,7.880)
N4: (46.895,119.645,9.459)
C6: (45.254,121.865,7.174)
C5: (46.094,121.471,8.140)
O3': (40.919,123.835,6.363)
Image (generated by PyMOL):