ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01925:01926

Extra

PDB:
ATOM 1 O3' A A1924 101.854 125.324 106.308 1.00 50.33 O
ATOM 2 P G A1925 101.209 126.785 106.233 1.00 50.00 P
ATOM 3 OP1 G A1925 102.237 127.682 105.653 1.00 51.13 O
ATOM 4 OP2 G A1925 100.639 127.085 107.570 1.00 49.71 O
ATOM 5 O5' G A1925 100.007 126.647 105.195 1.00 51.47 O
ATOM 6 C5' G A1925 98.639 126.822 105.625 1.00 51.20 C
ATOM 7 C4' G A1925 97.681 126.215 104.627 1.00 50.13 C
ATOM 8 O4' G A1925 97.507 127.131 103.513 1.00 48.81 O
ATOM 9 C3' G A1925 98.104 124.870 104.031 1.00 50.63 C
ATOM 10 O3' G A1925 97.119 123.853 104.149 1.00 51.70 O
ATOM 11 C2' G A1925 98.380 125.202 102.570 1.00 49.92 C
ATOM 12 O2' G A1925 98.112 124.130 101.687 1.00 48.39 O
ATOM 13 C1' G A1925 97.456 126.391 102.321 1.00 49.99 C
ATOM 14 N9 G A1925 97.964 127.213 101.224 1.00 51.81 N
ATOM 15 C8 G A1925 99.276 127.533 100.980 1.00 52.73 C
ATOM 16 N7 G A1925 99.454 128.128 99.834 1.00 53.29 N
ATOM 17 C5 G A1925 98.180 128.242 99.304 1.00 52.67 C
ATOM 18 C6 G A1925 97.753 128.771 98.073 1.00 52.98 C
ATOM 19 O6 G A1925 98.439 129.212 97.150 1.00 54.58 O
ATOM 20 N1 G A1925 96.372 128.744 97.955 1.00 53.13 N
ATOM 21 C2 G A1925 95.512 128.248 98.894 1.00 52.50 C
ATOM 22 N2 G A1925 94.209 128.342 98.606 1.00 52.06 N
ATOM 23 N3 G A1925 95.899 127.708 100.034 1.00 53.30 N
ATOM 24 C4 G A1925 97.241 127.737 100.174 1.00 52.88 C
ATOM 25 P U A1926 97.537 122.417 104.764 1.00 54.20 P
ATOM 26 OP1 U A1926 96.313 121.578 104.810 1.00 55.06 O
ATOM 27 OP2 U A1926 98.326 122.631 106.011 1.00 53.66 O
ATOM 28 O5' U A1926 98.508 121.764 103.686 1.00 52.47 O
TER

ATOM 1 O3' G B1925 97.119 123.853 104.149 1.00 51.70 O
ATOM 2 P U B1926 97.537 122.417 104.764 1.00 54.20 P
ATOM 3 OP1 U B1926 96.313 121.578 104.810 1.00 55.06 O
ATOM 4 OP2 U B1926 98.326 122.631 106.011 1.00 53.66 O
ATOM 5 O5' U B1926 98.508 121.764 103.686 1.00 52.47 O
ATOM 6 C5' U B1926 97.970 121.014 102.593 1.00 53.32 C
ATOM 7 C4' U B1926 98.589 119.634 102.530 1.00 54.80 C
ATOM 8 O4' U B1926 99.944 119.728 102.023 1.00 55.07 O
ATOM 9 C3' U B1926 98.661 118.805 103.812 1.00 54.33 C
ATOM 10 O3' U B1926 98.439 117.437 103.492 1.00 55.79 O
ATOM 11 C2' U B1926 100.121 118.957 104.227 1.00 54.42 C
ATOM 12 O2' U B1926 100.590 117.824 104.923 1.00 53.87 O
ATOM 13 C1' U B1926 100.819 119.018 102.872 1.00 54.42 C
ATOM 14 N1 U B1926 102.119 119.708 102.868 1.00 54.96 N
ATOM 15 C2 U B1926 103.225 119.004 102.416 1.00 54.66 C
ATOM 16 O2 U B1926 103.175 117.845 102.069 1.00 53.98 O
ATOM 17 N3 U B1926 104.398 119.715 102.392 1.00 55.64 N
ATOM 18 C4 U B1926 104.582 121.027 102.779 1.00 57.25 C
ATOM 19 O4 U B1926 105.708 121.530 102.709 1.00 57.61 O
ATOM 20 C5 U B1926 103.398 121.682 103.253 1.00 57.19 C
ATOM 21 C6 U B1926 102.238 121.017 103.281 1.00 56.07 C
ATOM 22 P A B1927 97.219 116.640 104.172 1.00 56.43 P
ATOM 23 OP1 A B1927 97.426 115.201 103.859 1.00 56.47 O
ATOM 24 OP2 A B1927 95.937 117.294 103.811 1.00 56.00 O
ATOM 25 O5' A B1927 97.445 116.832 105.730 1.00 55.91 O
TER

Atoms:
OP1: (102.237,127.682,105.653)
OP2: (100.639,127.085,107.570)
C3': (98.104,124.870,104.031)
C1': (97.456,126.391,102.321)
C5': (98.639,126.822,105.625)
O6: (98.439,129.212,97.150)
O4': (97.507,127.131,103.513)
C8: (99.276,127.533,100.980)
C2: (95.512,128.248,98.894)
C6: (97.753,128.771,98.073)
C5: (98.180,128.242,99.304)
C4: (97.241,127.737,100.174)
P: (101.209,126.785,106.233)
C4': (97.681,126.215,104.627)
C2': (98.380,125.202,102.570)
O2': (98.112,124.130,101.687)
N1: (96.372,128.744,97.955)
N2: (94.209,128.342,98.606)
N3: (95.899,127.708,100.034)
N7: (99.454,128.128,99.834)
N9: (97.964,127.213,101.224)
O5': (100.007,126.647,105.195)
O3': (97.119,123.853,104.149)
C4: (104.582,121.027,102.779)
N3: (104.398,119.715,102.392)
OP1: (96.313,121.578,104.810)
OP2: (98.326,122.631,106.011)
C2: (103.225,119.004,102.416)
C1': (100.819,119.018,102.872)
C3': (98.661,118.805,103.812)
O5': (98.508,121.764,103.686)
O4': (99.944,119.728,102.023)
C5': (97.970,121.014,102.593)
P: (97.537,122.417,104.764)
C4': (98.589,119.634,102.530)
C2': (100.121,118.957,104.227)
O2': (100.590,117.824,104.923)
N1: (102.119,119.708,102.868)
O4: (105.708,121.530,102.709)
O2: (103.175,117.845,102.069)
C6: (102.238,121.017,103.281)
C5: (103.398,121.682,103.253)
O3': (98.439,117.437,103.492)
Image (generated by PyMOL):
PyMOL image
show in jmol