Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01076:01204
Extra
PDB:
ATOM 1 O3' U A1075 35.363 98.927 142.134 1.00 44.99 O
ATOM 2 P A A1076 35.408 99.562 143.603 1.00 46.91 P
ATOM 3 OP1 A A1076 36.755 99.276 144.156 1.00 45.15 O
ATOM 4 OP2 A A1076 34.200 99.103 144.337 1.00 47.35 O
ATOM 5 O5' A A1076 35.285 101.131 143.351 1.00 45.50 O
ATOM 6 C5' A A1076 36.401 101.861 142.815 1.00 45.10 C
ATOM 7 C4' A A1076 36.109 103.337 142.776 1.00 42.99 C
ATOM 8 O4' A A1076 34.933 103.552 141.956 1.00 43.49 O
ATOM 9 C3' A A1076 35.832 104.011 144.112 1.00 42.34 C
ATOM 10 O3' A A1076 36.346 105.326 144.079 1.00 42.93 O
ATOM 11 C2' A A1076 34.313 104.070 144.151 1.00 43.41 C
ATOM 12 O2' A A1076 33.827 105.171 144.884 1.00 45.09 O
ATOM 13 C1' A A1076 33.975 104.283 142.683 1.00 42.94 C
ATOM 14 N9 A A1076 32.643 103.784 142.342 1.00 42.54 N
ATOM 15 C8 A A1076 32.213 102.481 142.237 1.00 42.92 C
ATOM 16 N7 A A1076 30.941 102.367 141.935 1.00 41.72 N
ATOM 17 C5 A A1076 30.508 103.680 141.825 1.00 41.79 C
ATOM 18 C6 A A1076 29.259 104.237 141.522 1.00 41.68 C
ATOM 19 N6 A A1076 28.177 103.511 141.239 1.00 42.92 N
ATOM 20 N1 A A1076 29.156 105.583 141.513 1.00 40.68 N
ATOM 21 C2 A A1076 30.245 106.309 141.778 1.00 41.53 C
ATOM 22 N3 A A1076 31.481 105.903 142.062 1.00 42.24 N
ATOM 23 C4 A A1076 31.545 104.562 142.073 1.00 42.19 C
ATOM 24 P A A1077 37.853 105.597 144.556 1.00 45.54 P
ATOM 25 OP1 A A1077 38.217 104.584 145.572 1.00 45.75 O
ATOM 26 OP2 A A1077 37.978 107.041 144.885 1.00 44.80 O
ATOM 27 O5' A A1077 38.710 105.283 143.250 1.00 45.79 O
TER
ATOM 1 O3' U B1203 25.395 105.057 139.725 1.00 46.91 O
ATOM 2 P C B1204 24.598 104.761 141.094 1.00 48.73 P
ATOM 3 OP1 C B1204 23.793 105.948 141.502 1.00 47.82 O
ATOM 4 OP2 C B1204 25.584 104.199 142.046 1.00 47.99 O
ATOM 5 O5' C B1204 23.594 103.597 140.681 1.00 48.03 O
ATOM 6 C5' C B1204 24.084 102.364 140.143 1.00 52.35 C
ATOM 7 C4' C B1204 23.061 101.279 140.331 1.00 55.86 C
ATOM 8 O4' C B1204 22.855 101.071 141.750 1.00 58.34 O
ATOM 9 C3' C B1204 21.683 101.616 139.793 1.00 58.03 C
ATOM 10 O3' C B1204 21.580 101.311 138.411 1.00 59.21 O
ATOM 11 C2' C B1204 20.780 100.746 140.651 1.00 58.97 C
ATOM 12 O2' C B1204 20.790 99.397 140.229 1.00 58.93 O
ATOM 13 C1' C B1204 21.477 100.852 142.009 1.00 60.18 C
ATOM 14 N1 C B1204 20.986 101.958 142.859 1.00 62.20 N
ATOM 15 C2 C B1204 20.049 101.682 143.866 1.00 64.48 C
ATOM 16 O2 C B1204 19.629 100.524 144.000 1.00 67.55 O
ATOM 17 N3 C B1204 19.623 102.688 144.669 1.00 65.30 N
ATOM 18 C4 C B1204 20.090 103.926 144.491 1.00 65.67 C
ATOM 19 N4 C B1204 19.654 104.888 145.310 1.00 65.86 N
ATOM 20 C5 C B1204 21.027 104.236 143.465 1.00 65.35 C
ATOM 21 C6 C B1204 21.442 103.233 142.679 1.00 63.47 C
ATOM 22 P A B1205 20.411 101.977 137.532 1.00 60.21 P
ATOM 23 OP1 A B1205 19.224 102.161 138.398 1.00 60.34 O
ATOM 24 OP2 A B1205 20.292 101.191 136.276 1.00 59.92 O
ATOM 25 O5' A B1205 20.943 103.438 137.184 1.00 59.77 O
TER
ATOM 2 P A A1076 35.408 99.562 143.603 1.00 46.91 P
ATOM 3 OP1 A A1076 36.755 99.276 144.156 1.00 45.15 O
ATOM 4 OP2 A A1076 34.200 99.103 144.337 1.00 47.35 O
ATOM 5 O5' A A1076 35.285 101.131 143.351 1.00 45.50 O
ATOM 6 C5' A A1076 36.401 101.861 142.815 1.00 45.10 C
ATOM 7 C4' A A1076 36.109 103.337 142.776 1.00 42.99 C
ATOM 8 O4' A A1076 34.933 103.552 141.956 1.00 43.49 O
ATOM 9 C3' A A1076 35.832 104.011 144.112 1.00 42.34 C
ATOM 10 O3' A A1076 36.346 105.326 144.079 1.00 42.93 O
ATOM 11 C2' A A1076 34.313 104.070 144.151 1.00 43.41 C
ATOM 12 O2' A A1076 33.827 105.171 144.884 1.00 45.09 O
ATOM 13 C1' A A1076 33.975 104.283 142.683 1.00 42.94 C
ATOM 14 N9 A A1076 32.643 103.784 142.342 1.00 42.54 N
ATOM 15 C8 A A1076 32.213 102.481 142.237 1.00 42.92 C
ATOM 16 N7 A A1076 30.941 102.367 141.935 1.00 41.72 N
ATOM 17 C5 A A1076 30.508 103.680 141.825 1.00 41.79 C
ATOM 18 C6 A A1076 29.259 104.237 141.522 1.00 41.68 C
ATOM 19 N6 A A1076 28.177 103.511 141.239 1.00 42.92 N
ATOM 20 N1 A A1076 29.156 105.583 141.513 1.00 40.68 N
ATOM 21 C2 A A1076 30.245 106.309 141.778 1.00 41.53 C
ATOM 22 N3 A A1076 31.481 105.903 142.062 1.00 42.24 N
ATOM 23 C4 A A1076 31.545 104.562 142.073 1.00 42.19 C
ATOM 24 P A A1077 37.853 105.597 144.556 1.00 45.54 P
ATOM 25 OP1 A A1077 38.217 104.584 145.572 1.00 45.75 O
ATOM 26 OP2 A A1077 37.978 107.041 144.885 1.00 44.80 O
ATOM 27 O5' A A1077 38.710 105.283 143.250 1.00 45.79 O
TER
ATOM 1 O3' U B1203 25.395 105.057 139.725 1.00 46.91 O
ATOM 2 P C B1204 24.598 104.761 141.094 1.00 48.73 P
ATOM 3 OP1 C B1204 23.793 105.948 141.502 1.00 47.82 O
ATOM 4 OP2 C B1204 25.584 104.199 142.046 1.00 47.99 O
ATOM 5 O5' C B1204 23.594 103.597 140.681 1.00 48.03 O
ATOM 6 C5' C B1204 24.084 102.364 140.143 1.00 52.35 C
ATOM 7 C4' C B1204 23.061 101.279 140.331 1.00 55.86 C
ATOM 8 O4' C B1204 22.855 101.071 141.750 1.00 58.34 O
ATOM 9 C3' C B1204 21.683 101.616 139.793 1.00 58.03 C
ATOM 10 O3' C B1204 21.580 101.311 138.411 1.00 59.21 O
ATOM 11 C2' C B1204 20.780 100.746 140.651 1.00 58.97 C
ATOM 12 O2' C B1204 20.790 99.397 140.229 1.00 58.93 O
ATOM 13 C1' C B1204 21.477 100.852 142.009 1.00 60.18 C
ATOM 14 N1 C B1204 20.986 101.958 142.859 1.00 62.20 N
ATOM 15 C2 C B1204 20.049 101.682 143.866 1.00 64.48 C
ATOM 16 O2 C B1204 19.629 100.524 144.000 1.00 67.55 O
ATOM 17 N3 C B1204 19.623 102.688 144.669 1.00 65.30 N
ATOM 18 C4 C B1204 20.090 103.926 144.491 1.00 65.67 C
ATOM 19 N4 C B1204 19.654 104.888 145.310 1.00 65.86 N
ATOM 20 C5 C B1204 21.027 104.236 143.465 1.00 65.35 C
ATOM 21 C6 C B1204 21.442 103.233 142.679 1.00 63.47 C
ATOM 22 P A B1205 20.411 101.977 137.532 1.00 60.21 P
ATOM 23 OP1 A B1205 19.224 102.161 138.398 1.00 60.34 O
ATOM 24 OP2 A B1205 20.292 101.191 136.276 1.00 59.92 O
ATOM 25 O5' A B1205 20.943 103.438 137.184 1.00 59.77 O
TER
Atoms:
OP1: (36.755,99.276,144.156)
OP2: (34.200,99.103,144.337)
C3': (35.832,104.011,144.112)
C1': (33.975,104.283,142.683)
C5': (36.401,101.861,142.815)
O4': (34.933,103.552,141.956)
C8: (32.213,102.481,142.237)
O2': (33.827,105.171,144.884)
C6: (29.259,104.237,141.522)
C5: (30.508,103.680,141.825)
C4: (31.545,104.562,142.073)
P: (35.408,99.562,143.603)
C4': (36.109,103.337,142.776)
C2': (34.313,104.070,144.151)
C2: (30.245,106.309,141.778)
N1: (29.156,105.583,141.513)
N3: (31.481,105.903,142.062)
N6: (28.177,103.511,141.239)
N7: (30.941,102.367,141.935)
N9: (32.643,103.784,142.342)
O5': (35.285,101.131,143.351)
O3': (36.346,105.326,144.079)
OP2: (34.200,99.103,144.337)
C3': (35.832,104.011,144.112)
C1': (33.975,104.283,142.683)
C5': (36.401,101.861,142.815)
O4': (34.933,103.552,141.956)
C8: (32.213,102.481,142.237)
O2': (33.827,105.171,144.884)
C6: (29.259,104.237,141.522)
C5: (30.508,103.680,141.825)
C4: (31.545,104.562,142.073)
P: (35.408,99.562,143.603)
C4': (36.109,103.337,142.776)
C2': (34.313,104.070,144.151)
C2: (30.245,106.309,141.778)
N1: (29.156,105.583,141.513)
N3: (31.481,105.903,142.062)
N6: (28.177,103.511,141.239)
N7: (30.941,102.367,141.935)
N9: (32.643,103.784,142.342)
O5': (35.285,101.131,143.351)
O3': (36.346,105.326,144.079)
C2: (20.049,101.682,143.866)
OP1: (23.793,105.948,141.502)
OP2: (25.584,104.199,142.046)
C4: (20.090,103.926,144.491)
O5': (23.594,103.597,140.681)
C3': (21.683,101.616,139.793)
C1': (21.477,100.852,142.009)
O4': (22.855,101.071,141.750)
C5': (24.084,102.364,140.143)
P: (24.598,104.761,141.094)
O2: (19.629,100.524,144.000)
C4': (23.061,101.279,140.331)
C2': (20.780,100.746,140.651)
O2': (20.790,99.397,140.229)
N1: (20.986,101.958,142.859)
N3: (19.623,102.688,144.669)
N4: (19.654,104.888,145.310)
C6: (21.442,103.233,142.679)
C5: (21.027,104.236,143.465)
O3': (21.580,101.311,138.411)
OP1: (23.793,105.948,141.502)
OP2: (25.584,104.199,142.046)
C4: (20.090,103.926,144.491)
O5': (23.594,103.597,140.681)
C3': (21.683,101.616,139.793)
C1': (21.477,100.852,142.009)
O4': (22.855,101.071,141.750)
C5': (24.084,102.364,140.143)
P: (24.598,104.761,141.094)
O2: (19.629,100.524,144.000)
C4': (23.061,101.279,140.331)
C2': (20.780,100.746,140.651)
O2': (20.790,99.397,140.229)
N1: (20.986,101.958,142.859)
N3: (19.623,102.688,144.669)
N4: (19.654,104.888,145.310)
C6: (21.442,103.233,142.679)
C5: (21.027,104.236,143.465)
O3': (21.580,101.311,138.411)
Image (generated by PyMOL):